RNA–Protein interactions for RNA: ENSMUST00000113440.1

Ccdc88b-201, Transcript of Coiled-coil domain-containing protein 88B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc88b, Length 4,959 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88b-201ENSMUST00000113440 Tctn2Q2MV57 700 aa13.21□□□□□ -0.29
Ccdc88b-201ENSMUST00000113440 Znf250Q7TNU6 535 aa13.21□□□□□ -0.29
Ccdc88b-201ENSMUST00000113440 Prss30Q9QYZ9 310 aa13.21□□□□□ -0.29
Ccdc88b-201ENSMUST00000113440 Gab2Q9Z1S8 665 aa13.21□□□□□ -0.29
Ccdc88b-201ENSMUST00000113440 MylkQ6PDN3 1941 aaKnown RBP13.21□□□□□ -0.29
Ccdc88b-201ENSMUST00000113440 Ighv4-1A0A075B5R5 116 aa13.21□□□□□ -0.29
Ccdc88b-201ENSMUST00000113440 Igkv1-132A0A0B4J1H9 120 aa13.21□□□□□ -0.29
Ccdc88b-201ENSMUST00000113440 Gm14124A2AU83 715 aa13.21□□□□□ -0.29
Ccdc88b-201ENSMUST00000113440 Tnfsf18Q7TS55 173 aa13.21□□□□□ -0.29
Ccdc88b-201ENSMUST00000113440 Nup35Q8R4R6 325 aa13.21□□□□□ -0.29
Ccdc88b-201ENSMUST00000113440 Chchd1Q9CQA6 118 aa13.21□□□□□ -0.29
Ccdc88b-201ENSMUST00000113440 Ceacam11Q9D0Z8 303 aa13.21□□□□□ -0.29
Ccdc88b-201ENSMUST00000113440 Wbp2nlQ9D529 359 aa13.21□□□□□ -0.29
Ccdc88b-201ENSMUST00000113440 AcacaQ5SWU9 2345 aa13.21□□□□□ -0.29
Ccdc88b-201ENSMUST00000113440 Esp23A8R0V5 104 aa13.21□□□□□ -0.29
Ccdc88b-201ENSMUST00000113440 Ankrd66J3QNN4 192 aa13.21□□□□□ -0.29
Ccdc88b-201ENSMUST00000113440 Igh-VJ558P01758 117 aa13.21□□□□□ -0.29
Ccdc88b-201ENSMUST00000113440 Olfr1356Q7TQU8 320 aa13.21□□□□□ -0.29
Ccdc88b-201ENSMUST00000113440 5930422O12RikQ8C4Y4 123 aa13.21□□□□□ -0.29
Ccdc88b-201ENSMUST00000113440 Olfr355Q8VFP6 310 aa13.21□□□□□ -0.29
Ccdc88b-201ENSMUST00000113440 Sfxn3Q91V61 321 aa13.21□□□□□ -0.29
Ccdc88b-201ENSMUST00000113440 Fgfrl1Q91V87 529 aa13.21□□□□□ -0.29
Ccdc88b-201ENSMUST00000113440 Cisd1Q91WS0 108 aaKnown RBP13.21□□□□□ -0.29
Ccdc88b-201ENSMUST00000113440 Q9CX63 252 aa13.21□□□□□ -0.29
Ccdc88b-201ENSMUST00000113440 Fam241aQ9CZL2 131 aa13.21□□□□□ -0.29
Ccdc88b-201ENSMUST00000113440 4930412O13RikQ9D5M9 106 aa13.21□□□□□ -0.29
Ccdc88b-201ENSMUST00000113440 TslpQ9JIE6 140 aa13.21□□□□□ -0.29
Ccdc88b-201ENSMUST00000113440 Col13a1Q9R1N9 751 aa13.21□□□□□ -0.29
Ccdc88b-201ENSMUST00000113440 Dennd4aE9Q8V6 1869 aa13.21□□□□□ -0.3
Ccdc88b-201ENSMUST00000113440 Zfp941Q3URY5 674 aa13.21□□□□□ -0.3
Ccdc88b-201ENSMUST00000113440 Fam162bQ9CX19 157 aa13.21□□□□□ -0.3
Ccdc88b-201ENSMUST00000113440 Gm9242J3QNY1 357 aa13.2□□□□□ -0.3
Ccdc88b-201ENSMUST00000113440 MpzP27573 248 aa13.2□□□□□ -0.3
Ccdc88b-201ENSMUST00000113440 Tspo2Q9CRZ8 162 aa13.2□□□□□ -0.3
Ccdc88b-201ENSMUST00000113440 Klk1b27Q9JM71 263 aa13.2□□□□□ -0.3
Ccdc88b-201ENSMUST00000113440 Abca7Q91V24 2159 aa13.2□□□□□ -0.3
Ccdc88b-201ENSMUST00000113440 ElnP54320 860 aa13.2□□□□□ -0.3
Ccdc88b-201ENSMUST00000113440 Rpl30P62889 115 aaKnown RBP13.2□□□□□ -0.3
Ccdc88b-201ENSMUST00000113440 Gimap1P70224 277 aa13.2□□□□□ -0.3
Ccdc88b-201ENSMUST00000113440 Olfr1272Q8VGN8 308 aa13.2□□□□□ -0.3
Ccdc88b-201ENSMUST00000113440 Olfr577Q8VH11 312 aa13.2□□□□□ -0.3
Ccdc88b-201ENSMUST00000113440 Cela3bQ9CQ52 269 aa13.2□□□□□ -0.3
Ccdc88b-201ENSMUST00000113440 Vmn1r119E9Q4H3 307 aa13.2□□□□□ -0.3
Ccdc88b-201ENSMUST00000113440 Olfr978E9Q985 311 aa13.2□□□□□ -0.3
Ccdc88b-201ENSMUST00000113440 Prr30Q9D9B7 401 aa13.2□□□□□ -0.3
Ccdc88b-201ENSMUST00000113440 Ighv6-4A0A0A6YX19 119 aa13.2□□□□□ -0.3
Ccdc88b-201ENSMUST00000113440 Ppp1r3cQ7TMB3 317 aa13.2□□□□□ -0.3
Ccdc88b-201ENSMUST00000113440 Olfr1204Q7TR10 309 aa13.2□□□□□ -0.3
Ccdc88b-201ENSMUST00000113440 Olfr875Q7TRE5 310 aa13.2□□□□□ -0.3
Ccdc88b-201ENSMUST00000113440 PaxxQ8K0Y7 205 aa13.2□□□□□ -0.3
Ccdc88b-201ENSMUST00000113440 Olfr1243Q8VGM7 305 aa13.2□□□□□ -0.3
Ccdc88b-201ENSMUST00000113440 UtrnE9Q6R7 3430 aa13.19□□□□□ -0.3
Ccdc88b-201ENSMUST00000113440 Ascl5M0QWB7 188 aa13.19□□□□□ -0.3
Ccdc88b-201ENSMUST00000113440 St6galnac2P70277 373 aa13.19□□□□□ -0.3
Ccdc88b-201ENSMUST00000113440 PcolceQ61398 468 aa13.19□□□□□ -0.3
Ccdc88b-201ENSMUST00000113440 SepsecsQ6P6M7 504 aa13.19□□□□□ -0.3
Ccdc88b-201ENSMUST00000113440 Cd200r4Q6XJV4 270 aa13.19□□□□□ -0.3
Ccdc88b-201ENSMUST00000113440 Tmem106bQ80X71 275 aa13.19□□□□□ -0.3
Ccdc88b-201ENSMUST00000113440 Olfr1370Q8VFG4 316 aa13.19□□□□□ -0.3
Ccdc88b-201ENSMUST00000113440 Gpr87Q99MT7 358 aa13.19□□□□□ -0.3
Ccdc88b-201ENSMUST00000113440 Q9DAA3 117 aa13.19□□□□□ -0.3
Ccdc88b-201ENSMUST00000113440 Gm12355A2A4X6 163 aa13.19□□□□□ -0.3
Ccdc88b-201ENSMUST00000113440 Meox1P32442 253 aa13.19□□□□□ -0.3
Ccdc88b-201ENSMUST00000113440 Tnfrsf26P83626 204 aa13.19□□□□□ -0.3
Ccdc88b-201ENSMUST00000113440 Srsf3P84104 164 aaKnown RBP13.19□□□□□ -0.3
Ccdc88b-201ENSMUST00000113440 Q497N7 227 aa13.19□□□□□ -0.3
Ccdc88b-201ENSMUST00000113440 Rtl6Q505G4 243 aa13.19□□□□□ -0.3
Ccdc88b-201ENSMUST00000113440 Tmprss3Q8K1T0 453 aa13.19□□□□□ -0.3
Ccdc88b-201ENSMUST00000113440 Wrap73Q9JM98 462 aa13.19□□□□□ -0.3
Ccdc88b-201ENSMUST00000113440 Defb3Q9WTL0 63 aa13.19□□□□□ -0.3
Ccdc88b-201ENSMUST00000113440 Tmem238lA0A1B0GS74 79 aa13.19□□□□□ -0.3
Ccdc88b-201ENSMUST00000113440 Obp2bA2BHR0 176 aa13.19□□□□□ -0.3
Ccdc88b-201ENSMUST00000113440 Asphd1Q2TA57 360 aa13.19□□□□□ -0.3
Ccdc88b-201ENSMUST00000113440 Olfr147Q60886 317 aa13.19□□□□□ -0.3
Ccdc88b-201ENSMUST00000113440 Megf10Q6DIB5 1147 aa13.19□□□□□ -0.3
Ccdc88b-201ENSMUST00000113440 Q8CDS7 251 aa13.19□□□□□ -0.3
Ccdc88b-201ENSMUST00000113440 Mbnl3Q8R003 342 aaKnown RBP13.19□□□□□ -0.3
Ccdc88b-201ENSMUST00000113440 Josd1Q9DBJ6 202 aa13.19□□□□□ -0.3
Ccdc88b-201ENSMUST00000113440 Fgf16Q9ESL8 207 aa13.19□□□□□ -0.3
Ccdc88b-201ENSMUST00000113440 Ighv5-17A0A075B5R1 117 aa13.19□□□□□ -0.3
Ccdc88b-201ENSMUST00000113440 Gm21310J3QQ23 232 aa13.19□□□□□ -0.3
Ccdc88b-201ENSMUST00000113440 Nkx3-1P97436 237 aa13.19□□□□□ -0.3
Ccdc88b-201ENSMUST00000113440 Dppa1Q810Y7 116 aa13.19□□□□□ -0.3
Ccdc88b-201ENSMUST00000113440 Rbfox2Q8BP71 449 aaKnown RBP13.19□□□□□ -0.3
Ccdc88b-201ENSMUST00000113440 Nhlrc3Q8CCH2 347 aa13.19□□□□□ -0.3
Ccdc88b-201ENSMUST00000113440 Nup37Q9CWU9 326 aa13.19□□□□□ -0.3
Ccdc88b-201ENSMUST00000113440 Olfr894Q9EQB2 313 aa13.19□□□□□ -0.3
Ccdc88b-201ENSMUST00000113440 Bcl2l2P70345 193 aa13.18□□□□□ -0.3
Ccdc88b-201ENSMUST00000113440 RpeQ8VEE0 228 aa13.18□□□□□ -0.3
Ccdc88b-201ENSMUST00000113440 Olfr127Q8VF25 323 aa13.18□□□□□ -0.3
Ccdc88b-201ENSMUST00000113440 Olfr824Q8VFU4 315 aa13.18□□□□□ -0.3
Ccdc88b-201ENSMUST00000113440 Prss22Q9ER10 306 aa13.18□□□□□ -0.3
Ccdc88b-201ENSMUST00000113440 Plxnb3Q9QY40 1902 aa13.18□□□□□ -0.3
Ccdc88b-201ENSMUST00000113440 Gm28372A0A087WNV0 220 aa13.18□□□□□ -0.3
Ccdc88b-201ENSMUST00000113440 Ighv9-4A0A0A6YWH6 117 aa13.18□□□□□ -0.3
Ccdc88b-201ENSMUST00000113440 H2-M5A7VMS3 348 aa13.18□□□□□ -0.3
Ccdc88b-201ENSMUST00000113440 Zfp11P10751 647 aa13.18□□□□□ -0.3
Ccdc88b-201ENSMUST00000113440 Cdkn1bP46414 197 aa13.18□□□□□ -0.3
Ccdc88b-201ENSMUST00000113440 Taar4Q5QD15 347 aa13.18□□□□□ -0.3
Ccdc88b-201ENSMUST00000113440 Foxg1Q60987 481 aa13.18□□□□□ -0.3
Retrieved 100 of 22,080 RNA–protein pairs in 54.4 ms