RNA–Protein interactions for RNA: ENST00000624887.1

PCDHB11-202, Transcript of protocadherin beta 11, humanhuman

TSL 2 BASIC

Gene PCDHB11, Length 1,973 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-202ENST00000624887 CLPSL1A2RUU4 121 aa15.25■□□□□ 0.03
PCDHB11-202ENST00000624887 J3QKU1 62 aa15.25■□□□□ 0.03
PCDHB11-202ENST00000624887 HBBP68871 147 aa15.25■□□□□ 0.03
PCDHB11-202ENST00000624887 LY6EQ16553 131 aa15.25■□□□□ 0.03
PCDHB11-202ENST00000624887 OR2D3Q8NGH3 330 aa15.25■□□□□ 0.03
PCDHB11-202ENST00000624887 LINC00527Q9UJ94 153 aa15.25■□□□□ 0.03
PCDHB11-202ENST00000624887 CRYBG3Q68DQ2 2970 aa15.25■□□□□ 0.03
PCDHB11-202ENST00000624887 AVPP01185 164 aa15.25■□□□□ 0.03
PCDHB11-202ENST00000624887 BTF3P20290 206 aaKnown RBP15.25■□□□□ 0.03
PCDHB11-202ENST00000624887 RELQ04864 619 aaPredicted RBP15.25■□□□□ 0.03
PCDHB11-202ENST00000624887 CELSR1Q9NYQ6 3014 aa15.25■□□□□ 0.03
PCDHB11-202ENST00000624887 CELSR2Q9HCU4 2923 aa15.24■□□□□ 0.03
PCDHB11-202ENST00000624887 A0A087X0K7 114 aa15.24■□□□□ 0.03
PCDHB11-202ENST00000624887 M0QZK8 103 aa15.24■□□□□ 0.03
PCDHB11-202ENST00000624887 IGHG2P01859 326 aa15.24■□□□□ 0.03
PCDHB11-202ENST00000624887 PRB4P10163 310 aaPredicted RBP15.24■□□□□ 0.03
PCDHB11-202ENST00000624887 CAMPP49913 170 aa15.24■□□□□ 0.03
PCDHB11-202ENST00000624887 PGLYRP4Q96LB8 373 aa15.24■□□□□ 0.03
PCDHB11-202ENST00000624887 FOXA3P55318 350 aaPredicted RBP15.24■□□□□ 0.03
PCDHB11-202ENST00000624887 ASCL2Q99929 193 aa15.24■□□□□ 0.03
PCDHB11-202ENST00000624887 SNHG12Q9BXW3 62 aa15.24■□□□□ 0.03
PCDHB11-202ENST00000624887 FBLL1A6NHQ2 334 aaKnown RBP15.23■□□□□ 0.03
PCDHB11-202ENST00000624887 M0R143 59 aa15.23■□□□□ 0.03
PCDHB11-202ENST00000624887 IGHG4P01861 327 aa15.23■□□□□ 0.03
PCDHB11-202ENST00000624887 TRGV3P03979 118 aa15.23■□□□□ 0.03
PCDHB11-202ENST00000624887 RAB4AP20338 218 aa15.23■□□□□ 0.03
PCDHB11-202ENST00000624887 CRIP1P50238 77 aa15.23■□□□□ 0.03
PCDHB11-202ENST00000624887 FAM208BQ5VWN6 2430 aa15.23■□□□□ 0.03
PCDHB11-202ENST00000624887 A0A096LNT2 108 aa15.22■□□□□ 0.03
PCDHB11-202ENST00000624887 CHEK1O14757 476 aa15.22■□□□□ 0.03
PCDHB11-202ENST00000624887 BRI3O95415 125 aa15.22■□□□□ 0.03
PCDHB11-202ENST00000624887 PPP1R14DQ9NXH3 145 aa15.22■□□□□ 0.03
PCDHB11-202ENST00000624887 IGKV2-40A0A087WW87 121 aaPredicted RBP15.22■□□□□ 0.03
PCDHB11-202ENST00000624887 IGKV2D-40P01614 121 aaPredicted RBP15.22■□□□□ 0.03
PCDHB11-202ENST00000624887 COX8CQ7Z4L0 72 aa15.22■□□□□ 0.03
PCDHB11-202ENST00000624887 LINC01356Q8N9X3 169 aa15.22■□□□□ 0.03
PCDHB11-202ENST00000624887 C8orf49Q96NF6 230 aa15.22■□□□□ 0.03
PCDHB11-202ENST00000624887 SSBP4Q9BWG4 385 aaPredicted RBP15.22■□□□□ 0.03
PCDHB11-202ENST00000624887 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP15.22■□□□□ 0.03
PCDHB11-202ENST00000624887 H3BUA1 57 aa15.21■□□□□ 0.03
PCDHB11-202ENST00000624887 CT45A10P0DMU9 189 aa15.21■□□□□ 0.03
PCDHB11-202ENST00000624887 PPIFP30405 207 aaKnown RBP15.21■□□□□ 0.03
PCDHB11-202ENST00000624887 RCHY1Q96PM5 261 aa15.21■□□□□ 0.03
PCDHB11-202ENST00000624887 METTL26Q96S19 204 aa15.21■□□□□ 0.03
PCDHB11-202ENST00000624887 SAMD10Q9BYL1 202 aa15.21■□□□□ 0.03
PCDHB11-202ENST00000624887 NAGKQ9UJ70 344 aa15.21■□□□□ 0.03
PCDHB11-202ENST00000624887 LRRK2Q5S007 2527 aa15.2■□□□□ 0.02
PCDHB11-202ENST00000624887 SAPCD1Q5SSQ6 148 aa15.2■□□□□ 0.02
PCDHB11-202ENST00000624887 C18orf32Q8TCD1 76 aa15.2■□□□□ 0.02
PCDHB11-202ENST00000624887 KCNS1Q96KK3 526 aa15.2■□□□□ 0.02
PCDHB11-202ENST00000624887 U3KQE9 123 aa15.2■□□□□ 0.02
PCDHB11-202ENST00000624887 MAP1AP78559 2803 aaPredicted RBP15.2■□□□□ 0.02
PCDHB11-202ENST00000624887 APOHP02749 345 aaPredicted RBP15.2■□□□□ 0.02
PCDHB11-202ENST00000624887 KRTAP10-9P60411 292 aa15.2■□□□□ 0.02
PCDHB11-202ENST00000624887 KLF5Q13887 457 aaPredicted RBP15.2■□□□□ 0.02
PCDHB11-202ENST00000624887 Q6ZWC4 215 aa15.2■□□□□ 0.02
PCDHB11-202ENST00000624887 ALKBH7Q9BT30 221 aaPredicted RBP15.2■□□□□ 0.02
PCDHB11-202ENST00000624887 HAX1O00165 279 aa15.19■□□□□ 0.02
PCDHB11-202ENST00000624887 GPX1P07203 203 aa15.19■□□□□ 0.02
PCDHB11-202ENST00000624887 HLA-DMBP28068 263 aa15.19■□□□□ 0.02
PCDHB11-202ENST00000624887 IGFL4Q6B9Z1 124 aa15.19■□□□□ 0.02
PCDHB11-202ENST00000624887 LCN12Q6JVE5 192 aa15.19■□□□□ 0.02
PCDHB11-202ENST00000624887 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa15.19■□□□□ 0.02
PCDHB11-202ENST00000624887 PRR25Q96S07 402 aa15.19■□□□□ 0.02
PCDHB11-202ENST00000624887 CHD6Q8TD26 2715 aa15.18■□□□□ 0.02
PCDHB11-202ENST00000624887 A0A1W2PS18 150 aa15.18■□□□□ 0.02
PCDHB11-202ENST00000624887 BLCAPP62952 87 aa15.18■□□□□ 0.02
PCDHB11-202ENST00000624887 C20orf144Q9BQM9 153 aa15.18■□□□□ 0.02
PCDHB11-202ENST00000624887 SLC50A1Q9BRV3 221 aa15.18■□□□□ 0.02
PCDHB11-202ENST00000624887 IGHV3-66A0A0C4DH42 116 aa15.18■□□□□ 0.02
PCDHB11-202ENST00000624887 SCGB1D1O95968 90 aa15.18■□□□□ 0.02
PCDHB11-202ENST00000624887 SIGLECL1Q8N7X8 197 aa15.18■□□□□ 0.02
PCDHB11-202ENST00000624887 USMG5Q96IX5 58 aa15.18■□□□□ 0.02
PCDHB11-202ENST00000624887 FBN2P35556 2912 aa15.17■□□□□ 0.02
PCDHB11-202ENST00000624887 ZNF705FA8MVS1 300 aaPredicted RBP15.17■□□□□ 0.02
PCDHB11-202ENST00000624887 ARL3P36405 182 aa15.17■□□□□ 0.02
PCDHB11-202ENST00000624887 VGLL1Q99990 258 aa15.17■□□□□ 0.02
PCDHB11-202ENST00000624887 J3QLI3 93 aa15.16■□□□□ 0.02
PCDHB11-202ENST00000624887 FAM162BQ5T6X4 162 aa15.16■□□□□ 0.02
PCDHB11-202ENST00000624887 Q6AWC8 147 aa15.16■□□□□ 0.02
PCDHB11-202ENST00000624887 ANKRD17O75179 2603 aaKnown RBP15.16■□□□□ 0.02
PCDHB11-202ENST00000624887 A0A1B0GUT8 65 aa15.16■□□□□ 0.02
PCDHB11-202ENST00000624887 ZNF207O43670 478 aaKnown RBP15.16■□□□□ 0.02
PCDHB11-202ENST00000624887 Q6ZS46 218 aa15.16■□□□□ 0.02
PCDHB11-202ENST00000624887 IGHV3OR16-13A0A075B7E8 117 aa15.15■□□□□ 0.02
PCDHB11-202ENST00000624887 IGHV3-74A0A0B4J1X5 117 aa15.15■□□□□ 0.02
PCDHB11-202ENST00000624887 SH2D1AO60880 128 aa15.15■□□□□ 0.02
PCDHB11-202ENST00000624887 ZNF324O75467 553 aaPredicted RBP15.15■□□□□ 0.02
PCDHB11-202ENST00000624887 AMTP48728 403 aa15.15■□□□□ 0.02
PCDHB11-202ENST00000624887 GAGE1Q13065 139 aa15.15■□□□□ 0.02
PCDHB11-202ENST00000624887 TEX43Q6ZNM6 134 aa15.15■□□□□ 0.02
PCDHB11-202ENST00000624887 IGHV3-49A0A0A0MS15 119 aa15.15■□□□□ 0.02
PCDHB11-202ENST00000624887 CD33P20138 364 aa15.15■□□□□ 0.02
PCDHB11-202ENST00000624887 Q8TAT8 98 aa15.15■□□□□ 0.02
PCDHB11-202ENST00000624887 PSMG3-AS1Q96PY0 264 aa15.15■□□□□ 0.02
PCDHB11-202ENST00000624887 BEX4Q9NWD9 120 aaPredicted RBP15.15■□□□□ 0.02
PCDHB11-202ENST00000624887 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP15.14■□□□□ 0.01
PCDHB11-202ENST00000624887 RBAKDNA6NC62 111 aa15.14■□□□□ 0.01
PCDHB11-202ENST00000624887 RIGQ13278 110 aa15.14■□□□□ 0.01
PCDHB11-202ENST00000624887 TMEM189A5PLL7 270 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms