RNA–Protein interactions for RNA: ENST00000610970.1

HOXA4-204, Transcript of homeobox A4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA4, Length 1,728 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA4-204ENST00000610970 CCDC140Q96MF4 163 aa18.46■□□□□ 0.55
HOXA4-204ENST00000610970 UBR5O95071 2799 aaPredicted RBP18.46■□□□□ 0.55
HOXA4-204ENST00000610970 TRAV41A0A0B4J266 112 aa18.46■□□□□ 0.55
HOXA4-204ENST00000610970 BUB3O43684 328 aa18.46■□□□□ 0.55
HOXA4-204ENST00000610970 BRI3O95415 125 aa18.46■□□□□ 0.55
HOXA4-204ENST00000610970 RAB4AP20338 218 aa18.46■□□□□ 0.55
HOXA4-204ENST00000610970 CRIP1P50238 77 aa18.46■□□□□ 0.55
HOXA4-204ENST00000610970 NIT1Q86X76 327 aa18.46■□□□□ 0.55
HOXA4-204ENST00000610970 C20orf144Q9BQM9 153 aa18.46■□□□□ 0.55
HOXA4-204ENST00000610970 SLC50A1Q9BRV3 221 aa18.46■□□□□ 0.55
HOXA4-204ENST00000610970 DOPEY1Q5JWR5 2465 aa18.46■□□□□ 0.54
HOXA4-204ENST00000610970 KRTDAPP60985 99 aa18.45■□□□□ 0.54
HOXA4-204ENST00000610970 CLEC19AQ6UXS0 136 aa18.45■□□□□ 0.54
HOXA4-204ENST00000610970 WNK2Q9Y3S1 2297 aa18.45■□□□□ 0.54
HOXA4-204ENST00000610970 LOC102724200A0A096LPH7 203 aaPredicted RBP18.44■□□□□ 0.54
HOXA4-204ENST00000610970 TRAV40A0A0B4J280 105 aa18.44■□□□□ 0.54
HOXA4-204ENST00000610970 LINC01548A6NM66 108 aa18.44■□□□□ 0.54
HOXA4-204ENST00000610970 RPS20P60866 119 aaKnown RBP18.44■□□□□ 0.54
HOXA4-204ENST00000610970 CHCHD1Q96BP2 118 aaKnown RBP18.44■□□□□ 0.54
HOXA4-204ENST00000610970 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP18.43■□□□□ 0.54
HOXA4-204ENST00000610970 BMI1P35226 326 aa18.43■□□□□ 0.54
HOXA4-204ENST00000610970 SRSF2Q01130 221 aaKnown RBP18.43■□□□□ 0.54
HOXA4-204ENST00000610970 PRR25Q96S07 402 aa18.43■□□□□ 0.54
HOXA4-204ENST00000610970 RBAKDNA6NC62 111 aa18.43■□□□□ 0.54
HOXA4-204ENST00000610970 M0QZK8 103 aa18.43■□□□□ 0.54
HOXA4-204ENST00000610970 CD33P20138 364 aa18.43■□□□□ 0.54
HOXA4-204ENST00000610970 C8orf49Q96NF6 230 aa18.43■□□□□ 0.54
HOXA4-204ENST00000610970 METTL26Q96S19 204 aa18.43■□□□□ 0.54
HOXA4-204ENST00000610970 TMEM189A5PLL7 270 aa18.42■□□□□ 0.54
HOXA4-204ENST00000610970 H3BUA1 57 aa18.42■□□□□ 0.54
HOXA4-204ENST00000610970 IGF1P05019 195 aa18.42■□□□□ 0.54
HOXA4-204ENST00000610970 MSMBP08118 114 aa18.42■□□□□ 0.54
HOXA4-204ENST00000610970 VAMP8Q9BV40 100 aa18.42■□□□□ 0.54
HOXA4-204ENST00000610970 COL12A1Q99715 3063 aa18.42■□□□□ 0.54
HOXA4-204ENST00000610970 NTF3P20783 257 aa18.41■□□□□ 0.54
HOXA4-204ENST00000610970 LCN12Q6JVE5 192 aa18.41■□□□□ 0.54
HOXA4-204ENST00000610970 Q71RC1 249 aaPredicted RBP18.41■□□□□ 0.54
HOXA4-204ENST00000610970 TMEM219Q86XT9 240 aa18.41■□□□□ 0.54
HOXA4-204ENST00000610970 SPTAN1Q13813 2472 aaKnown RBP18.41■□□□□ 0.54
HOXA4-204ENST00000610970 IGKV2-40A0A087WW87 121 aaPredicted RBP18.4■□□□□ 0.54
HOXA4-204ENST00000610970 CLPSL1A2RUU4 121 aa18.4■□□□□ 0.54
HOXA4-204ENST00000610970 IGKV2D-40P01614 121 aaPredicted RBP18.4■□□□□ 0.54
HOXA4-204ENST00000610970 IGHG4P01861 327 aa18.4■□□□□ 0.54
HOXA4-204ENST00000610970 RNASEKQ6P5S7 137 aaKnown RBP18.4■□□□□ 0.54
HOXA4-204ENST00000610970 Q8N976 141 aa18.4■□□□□ 0.54
HOXA4-204ENST00000610970 MRPL53Q96EL3 112 aaKnown RBP18.4■□□□□ 0.54
HOXA4-204ENST00000610970 CLEC5AQ9NY25 188 aa18.4■□□□□ 0.54
HOXA4-204ENST00000610970 U3KQE9 123 aa18.4■□□□□ 0.54
HOXA4-204ENST00000610970 IGHV3OR16-10A0A075B7F0 116 aa18.4■□□□□ 0.54
HOXA4-204ENST00000610970 IGHV4-30-2A0A087WSY4 118 aa18.4■□□□□ 0.54
HOXA4-204ENST00000610970 M0R2Z0 102 aa18.4■□□□□ 0.54
HOXA4-204ENST00000610970 SH2D1AO60880 128 aa18.4■□□□□ 0.54
HOXA4-204ENST00000610970 C3orf79P0CE67 100 aa18.4■□□□□ 0.54
HOXA4-204ENST00000610970 RNF224P0DH78 156 aa18.4■□□□□ 0.54
HOXA4-204ENST00000610970 GATA3P23771 443 aa18.4■□□□□ 0.54
HOXA4-204ENST00000610970 FAM19A2Q8N3H0 131 aa18.4■□□□□ 0.54
HOXA4-204ENST00000610970 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa18.39■□□□□ 0.53
HOXA4-204ENST00000610970 BRD3OSQ6XYD6 125 aa18.39■□□□□ 0.53
HOXA4-204ENST00000610970 ZNF493Q6ZR52 646 aa18.39■□□□□ 0.53
HOXA4-204ENST00000610970 IGHV3-35A0A0C4DH35 117 aa18.38■□□□□ 0.53
HOXA4-204ENST00000610970 A6NDX4 124 aa18.38■□□□□ 0.53
HOXA4-204ENST00000610970 B4DSR2 109 aa18.38■□□□□ 0.53
HOXA4-204ENST00000610970 ARMS2P0C7Q2 107 aa18.38■□□□□ 0.53
HOXA4-204ENST00000610970 MRPL52Q86TS9 123 aaKnown RBP18.38■□□□□ 0.53
HOXA4-204ENST00000610970 RNF114Q9Y508 228 aa18.38■□□□□ 0.53
HOXA4-204ENST00000610970 USMG5Q96IX5 58 aa18.37■□□□□ 0.53
HOXA4-204ENST00000610970 HIF1ANQ9NWT6 349 aa18.37■□□□□ 0.53
HOXA4-204ENST00000610970 LRRK2Q5S007 2527 aa18.37■□□□□ 0.53
HOXA4-204ENST00000610970 IGHG2P01859 326 aa18.37■□□□□ 0.53
HOXA4-204ENST00000610970 IGHV4-38-2P0DP08 117 aa18.37■□□□□ 0.53
HOXA4-204ENST00000610970 PMCHL1Q16048 86 aa18.37■□□□□ 0.53
HOXA4-204ENST00000610970 C2orf88Q9BSF0 95 aa18.37■□□□□ 0.53
HOXA4-204ENST00000610970 FAM181BA6NEQ2 426 aa18.36■□□□□ 0.53
HOXA4-204ENST00000610970 TRGV3P03979 118 aa18.36■□□□□ 0.53
HOXA4-204ENST00000610970 VGLL1Q99990 258 aa18.36■□□□□ 0.53
HOXA4-204ENST00000610970 MIEN1Q9BRT3 115 aa18.36■□□□□ 0.53
HOXA4-204ENST00000610970 LINC00614P0C842 121 aa18.35■□□□□ 0.53
HOXA4-204ENST00000610970 SLC25A16P16260 332 aa18.35■□□□□ 0.53
HOXA4-204ENST00000610970 SRSF1Q07955 248 aaKnown RBP eCLIP18.35■□□□□ 0.53
HOXA4-204ENST00000610970 URB1-AS1Q96HZ7 61 aa18.35■□□□□ 0.53
HOXA4-204ENST00000610970 ASCL2Q99929 193 aa18.35■□□□□ 0.53
HOXA4-204ENST00000610970 IGHV3OR16-8A0A075B7F1 116 aa18.35■□□□□ 0.53
HOXA4-204ENST00000610970 OR5AL1P0C617 328 aa18.35■□□□□ 0.53
HOXA4-204ENST00000610970 BTF3P20290 206 aaKnown RBP18.34■□□□□ 0.53
HOXA4-204ENST00000610970 FABP5P3A8MUU1 101 aa18.33■□□□□ 0.52
HOXA4-204ENST00000610970 LYZL1Q6UWQ5 148 aa18.33■□□□□ 0.52
HOXA4-204ENST00000610970 H3BUX3 64 aa18.32■□□□□ 0.52
HOXA4-204ENST00000610970 HLA-DMBP28068 263 aa18.32■□□□□ 0.52
HOXA4-204ENST00000610970 ARL3P36405 182 aa18.32■□□□□ 0.52
HOXA4-204ENST00000610970 TDRG1Q3Y452 100 aa18.32■□□□□ 0.52
HOXA4-204ENST00000610970 ZNF580Q9UK33 172 aa18.32■□□□□ 0.52
HOXA4-204ENST00000610970 PAM16Q9Y3D7 125 aa18.32■□□□□ 0.52
HOXA4-204ENST00000610970 NDUFA4O00483 81 aa18.32■□□□□ 0.52
HOXA4-204ENST00000610970 PPIFP30405 207 aaKnown RBP18.32■□□□□ 0.52
HOXA4-204ENST00000610970 CTRLP40313 264 aa18.32■□□□□ 0.52
HOXA4-204ENST00000610970 PPP1R14DQ9NXH3 145 aa18.32■□□□□ 0.52
HOXA4-204ENST00000610970 TACC2O95359 2948 aa18.31■□□□□ 0.52
HOXA4-204ENST00000610970 IGFL4Q6B9Z1 124 aa18.31■□□□□ 0.52
HOXA4-204ENST00000610970 C2orf70A6NJV1 201 aa18.3■□□□□ 0.52
HOXA4-204ENST00000610970 Q8TAT8 98 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms