RNA–Protein interactions for RNA: ENST00000581241.5

CSNK1D-217, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 6,094 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-217ENST00000581241 UBE2E2Q96LR5 201 aa11.69□□□□□ -0.54
CSNK1D-217ENST00000581241 MSRB2Q9Y3D2 182 aa11.69□□□□□ -0.54
CSNK1D-217ENST00000581241 FGF6P10767 208 aa11.69□□□□□ -0.54
CSNK1D-217ENST00000581241 BRD3OSQ6XYD6 125 aa11.69□□□□□ -0.54
CSNK1D-217ENST00000581241 LMO1P25800 156 aa11.68□□□□□ -0.54
CSNK1D-217ENST00000581241 BOD1L2Q8IYS8 172 aa11.68□□□□□ -0.54
CSNK1D-217ENST00000581241 UBE2DNLQ8IWF7 75 aa11.68□□□□□ -0.54
CSNK1D-217ENST00000581241 ASCC3Q8N3C0 2202 aaKnown RBP11.68□□□□□ -0.54
CSNK1D-217ENST00000581241 TRAV26-2A0A0B4J265 109 aa11.68□□□□□ -0.54
CSNK1D-217ENST00000581241 SPACA3Q8IXA5 215 aa11.68□□□□□ -0.54
CSNK1D-217ENST00000581241 SSC4DQ8WTU2 575 aa11.67□□□□□ -0.54
CSNK1D-217ENST00000581241 B4DSR2 109 aa11.67□□□□□ -0.54
CSNK1D-217ENST00000581241 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.67□□□□□ -0.54
CSNK1D-217ENST00000581241 CITED1Q99966 193 aa11.67□□□□□ -0.54
CSNK1D-217ENST00000581241 RHODO00212 210 aa11.67□□□□□ -0.54
CSNK1D-217ENST00000581241 IGHG3P01860 377 aa11.67□□□□□ -0.54
CSNK1D-217ENST00000581241 CITED2Q99967 270 aaPredicted RBP11.66□□□□□ -0.54
CSNK1D-217ENST00000581241 IGKV1-39P01597 117 aa11.66□□□□□ -0.54
CSNK1D-217ENST00000581241 IGKV1D-39P04432 117 aa11.66□□□□□ -0.54
CSNK1D-217ENST00000581241 RNF166Q96A37 237 aaPredicted RBP11.66□□□□□ -0.54
CSNK1D-217ENST00000581241 ZNRD1Q9P1U0 126 aa11.66□□□□□ -0.54
CSNK1D-217ENST00000581241 PRO1854Q9UHT4 67 aa11.66□□□□□ -0.54
CSNK1D-217ENST00000581241 Q8TCH9 128 aa11.66□□□□□ -0.54
CSNK1D-217ENST00000581241 KLHL30-AS1Q8NEE0 82 aa11.66□□□□□ -0.54
CSNK1D-217ENST00000581241 K7ERJ3 54 aa11.65□□□□□ -0.54
CSNK1D-217ENST00000581241 AZU1P20160 251 aa11.65□□□□□ -0.54
CSNK1D-217ENST00000581241 KLF5Q13887 457 aaPredicted RBP11.65□□□□□ -0.54
CSNK1D-217ENST00000581241 SPTBP11277 2137 aa11.65□□□□□ -0.54
CSNK1D-217ENST00000581241 TRBV25-1A0A075B6N4 114 aa11.65□□□□□ -0.54
CSNK1D-217ENST00000581241 MORN5Q5VZ52 161 aa11.65□□□□□ -0.54
CSNK1D-217ENST00000581241 UBL5Q9BZL1 73 aa11.65□□□□□ -0.54
CSNK1D-217ENST00000581241 OVOL3O00110 214 aa11.65□□□□□ -0.54
CSNK1D-217ENST00000581241 C17orf58Q2M2W7 97 aa11.65□□□□□ -0.54
CSNK1D-217ENST00000581241 ATP6V0E1O15342 81 aa11.65□□□□□ -0.55
CSNK1D-217ENST00000581241 SAA4P35542 130 aa11.65□□□□□ -0.55
CSNK1D-217ENST00000581241 UNC13CQ8NB66 2214 aa11.65□□□□□ -0.55
CSNK1D-217ENST00000581241 ETDBQ3ZM63 59 aa11.64□□□□□ -0.55
CSNK1D-217ENST00000581241 THAP8Q8NA92 274 aa11.64□□□□□ -0.55
CSNK1D-217ENST00000581241 C11orf52Q96A22 123 aa11.64□□□□□ -0.55
CSNK1D-217ENST00000581241 ZC2HC1AQ96GY0 325 aa11.64□□□□□ -0.55
CSNK1D-217ENST00000581241 CARD19Q96LW7 228 aa11.64□□□□□ -0.55
CSNK1D-217ENST00000581241 C1orf147Q96MC9 270 aaPredicted RBP11.64□□□□□ -0.55
CSNK1D-217ENST00000581241 PRR25Q96S07 402 aa11.64□□□□□ -0.55
CSNK1D-217ENST00000581241 IGLC7A0M8Q6 106 aa11.64□□□□□ -0.55
CSNK1D-217ENST00000581241 NPYP01303 97 aa11.64□□□□□ -0.55
CSNK1D-217ENST00000581241 C8orf86Q6ZUL3 223 aa11.64□□□□□ -0.55
CSNK1D-217ENST00000581241 HAPLN4Q86UW8 402 aa11.64□□□□□ -0.55
CSNK1D-217ENST00000581241 KLK9Q9UKQ9 250 aa11.64□□□□□ -0.55
CSNK1D-217ENST00000581241 HLA-DMBP28068 263 aa11.64□□□□□ -0.55
CSNK1D-217ENST00000581241 MRPL35Q9NZE8 188 aaKnown RBP11.64□□□□□ -0.55
CSNK1D-217ENST00000581241 PYGO2Q9BRQ0 406 aa11.63□□□□□ -0.55
CSNK1D-217ENST00000581241 TSC2P49815 1807 aa11.63□□□□□ -0.55
CSNK1D-217ENST00000581241 DEFB131AP59861 70 aa11.63□□□□□ -0.55
CSNK1D-217ENST00000581241 FXYD5Q96DB9 178 aa11.63□□□□□ -0.55
CSNK1D-217ENST00000581241 K7EN84 100 aa11.63□□□□□ -0.55
CSNK1D-217ENST00000581241 NDUFS7O75251 213 aa11.63□□□□□ -0.55
CSNK1D-217ENST00000581241 LTAP01374 205 aa11.63□□□□□ -0.55
CSNK1D-217ENST00000581241 RPL32P62910 135 aaKnown RBP11.63□□□□□ -0.55
CSNK1D-217ENST00000581241 ANXA2RQ3ZCQ2 193 aa11.63□□□□□ -0.55
CSNK1D-217ENST00000581241 IGHV1OR15-1A0A075B7D0 117 aa11.63□□□□□ -0.55
CSNK1D-217ENST00000581241 GAGE12JA6NER3 117 aa11.63□□□□□ -0.55
CSNK1D-217ENST00000581241 SYNJ2BPP57105 145 aa11.63□□□□□ -0.55
CSNK1D-217ENST00000581241 GAGE4Q13068 117 aa11.63□□□□□ -0.55
CSNK1D-217ENST00000581241 GAGE5Q13069 117 aa11.63□□□□□ -0.55
CSNK1D-217ENST00000581241 MRAPQ8TCY5 172 aa11.63□□□□□ -0.55
CSNK1D-217ENST00000581241 TRAV13-2A0A0B4J235 113 aa11.63□□□□□ -0.55
CSNK1D-217ENST00000581241 WIPF2Q8TF74 440 aaPredicted RBP11.63□□□□□ -0.55
CSNK1D-217ENST00000581241 SPANXCQ9NY87 97 aa11.63□□□□□ -0.55
CSNK1D-217ENST00000581241 SDHAF1A6NFY7 115 aa11.62□□□□□ -0.55
CSNK1D-217ENST00000581241 C12orf74Q32Q52 190 aa11.62□□□□□ -0.55
CSNK1D-217ENST00000581241 NDUFA12Q9UI09 145 aa11.62□□□□□ -0.55
CSNK1D-217ENST00000581241 F8VRH5 84 aa11.62□□□□□ -0.55
CSNK1D-217ENST00000581241 LINC01356Q8N9X3 169 aa11.62□□□□□ -0.55
CSNK1D-217ENST00000581241 WIPF3A6NGB9 483 aa11.62□□□□□ -0.55
CSNK1D-217ENST00000581241 E7EQL1 145 aa11.62□□□□□ -0.55
CSNK1D-217ENST00000581241 H3BMG7 143 aa11.62□□□□□ -0.55
CSNK1D-217ENST00000581241 TMEM126AQ9H061 195 aa11.62□□□□□ -0.55
CSNK1D-217ENST00000581241 KNCNA6PVL3 124 aa11.61□□□□□ -0.55
CSNK1D-217ENST00000581241 IGHG4P01861 327 aa11.61□□□□□ -0.55
CSNK1D-217ENST00000581241 VWC2Q2TAL6 325 aa11.61□□□□□ -0.55
CSNK1D-217ENST00000581241 GATA4P43694 442 aa11.61□□□□□ -0.55
CSNK1D-217ENST00000581241 PSCAO43653 123 aa11.61□□□□□ -0.55
CSNK1D-217ENST00000581241 CDKN1BP46527 198 aa11.61□□□□□ -0.55
CSNK1D-217ENST00000581241 UBE2E1P51965 193 aa11.61□□□□□ -0.55
CSNK1D-217ENST00000581241 SPINK13Q1W4C9 94 aa11.61□□□□□ -0.55
CSNK1D-217ENST00000581241 LYPD6BQ8NI32 183 aa11.61□□□□□ -0.55
CSNK1D-217ENST00000581241 IGHV3-16A0A0C4DH30 117 aa11.61□□□□□ -0.55
CSNK1D-217ENST00000581241 C20orf78Q9BR46 151 aa11.61□□□□□ -0.55
CSNK1D-217ENST00000581241 SMIM2Q9BVW6 85 aa11.61□□□□□ -0.55
CSNK1D-217ENST00000581241 ETV2O00321 342 aaPredicted RBP11.61□□□□□ -0.55
CSNK1D-217ENST00000581241 ANKRD29Q8N6D5 301 aa11.61□□□□□ -0.55
CSNK1D-217ENST00000581241 LINC01619G3V211 115 aa11.6□□□□□ -0.55
CSNK1D-217ENST00000581241 PFN2P35080 140 aa11.6□□□□□ -0.55
CSNK1D-217ENST00000581241 HOXD3P31249 432 aaPredicted RBP11.6□□□□□ -0.55
CSNK1D-217ENST00000581241 LY6DQ14210 128 aa11.6□□□□□ -0.55
CSNK1D-217ENST00000581241 K7EM74 188 aa11.6□□□□□ -0.55
CSNK1D-217ENST00000581241 SRSF2Q01130 221 aaKnown RBP11.6□□□□□ -0.55
CSNK1D-217ENST00000581241 RUSC1-AS1Q66K80 236 aa11.6□□□□□ -0.55
CSNK1D-217ENST00000581241 WDR86Q86TI4 376 aa11.6□□□□□ -0.55
CSNK1D-217ENST00000581241 F5P12259 2224 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms