RNA–Protein interactions for RNA: ENST00000562303.5

RPAP1-204, Transcript of RNA polymerase II associated protein 1, humanhuman

TSL 1 (best)

Gene RPAP1, Length 5,897 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1-204ENST00000562303 THADAQ6YHU6 1953 aa9.05□□□□□ -0.96
RPAP1-204ENST00000562303 PFN1P07737 140 aaKnown RBP9.05□□□□□ -0.96
RPAP1-204ENST00000562303 IGF2BP2-AS1Q96M15 143 aa9.05□□□□□ -0.96
RPAP1-204ENST00000562303 DOCK4Q8N1I0 1966 aa9.05□□□□□ -0.96
RPAP1-204ENST00000562303 H3BMM0 161 aa9.04□□□□□ -0.96
RPAP1-204ENST00000562303 HIST3H2BBQ8N257 126 aa9.04□□□□□ -0.96
RPAP1-204ENST00000562303 HS3ST6Q96QI5 342 aa9.04□□□□□ -0.96
RPAP1-204ENST00000562303 FNDC10F2Z333 226 aa9.04□□□□□ -0.96
RPAP1-204ENST00000562303 MMP23AO75900 390 aa9.04□□□□□ -0.96
RPAP1-204ENST00000562303 YPEL3P61236 119 aaPredicted RBP9.04□□□□□ -0.96
RPAP1-204ENST00000562303 TMEM75Q8N9X5 138 aa9.04□□□□□ -0.96
RPAP1-204ENST00000562303 TAF1LQ8IZX4 1826 aa9.04□□□□□ -0.96
RPAP1-204ENST00000562303 NEGR1Q7Z3B1 354 aa9.04□□□□□ -0.96
RPAP1-204ENST00000562303 REG4Q9BYZ8 158 aa9.04□□□□□ -0.96
RPAP1-204ENST00000562303 SDK2Q58EX2 2172 aa9.04□□□□□ -0.96
RPAP1-204ENST00000562303 A0A1B0GW64 132 aa9.04□□□□□ -0.96
RPAP1-204ENST00000562303 TAL2Q16559 108 aa9.04□□□□□ -0.96
RPAP1-204ENST00000562303 LINC00479Q96M42 142 aa9.04□□□□□ -0.96
RPAP1-204ENST00000562303 ZNF236Q9UL36 1845 aa9.03□□□□□ -0.96
RPAP1-204ENST00000562303 PRSS29PA6NIE9 313 aa9.03□□□□□ -0.96
RPAP1-204ENST00000562303 SOCS3O14543 225 aa9.03□□□□□ -0.96
RPAP1-204ENST00000562303 TMEM141Q96I45 108 aa9.03□□□□□ -0.96
RPAP1-204ENST00000562303 GFRA4Q9GZZ7 299 aa9.03□□□□□ -0.96
RPAP1-204ENST00000562303 TMEM213A2RRL7 107 aa9.03□□□□□ -0.96
RPAP1-204ENST00000562303 CDKN1BP46527 198 aa9.03□□□□□ -0.96
RPAP1-204ENST00000562303 UBE2WQ96B02 151 aa9.03□□□□□ -0.96
RPAP1-204ENST00000562303 C9JAW5 83 aa9.03□□□□□ -0.96
RPAP1-204ENST00000562303 NDUFA4O00483 81 aa9.03□□□□□ -0.96
RPAP1-204ENST00000562303 C3orf79P0CE67 100 aa9.03□□□□□ -0.96
RPAP1-204ENST00000562303 UBE2BP63146 152 aa9.03□□□□□ -0.96
RPAP1-204ENST00000562303 CITED2Q99967 270 aaPredicted RBP9.03□□□□□ -0.96
RPAP1-204ENST00000562303 ANGP03950 147 aaKnown RBP9.03□□□□□ -0.96
RPAP1-204ENST00000562303 C8orf86Q6ZUL3 223 aa9.03□□□□□ -0.96
RPAP1-204ENST00000562303 TMEM256Q8N2U0 113 aa9.03□□□□□ -0.96
RPAP1-204ENST00000562303 ABCA4P78363 2273 aa9.03□□□□□ -0.96
RPAP1-204ENST00000562303 A0A0G2JRQ6 117 aa9.03□□□□□ -0.96
RPAP1-204ENST00000562303 UBE2CO00762 179 aa9.03□□□□□ -0.96
RPAP1-204ENST00000562303 PSME4Q14997 1843 aa9.02□□□□□ -0.96
RPAP1-204ENST00000562303 Q8TCH9 128 aa9.02□□□□□ -0.96
RPAP1-204ENST00000562303 TET1Q8NFU7 2136 aa9.02□□□□□ -0.96
RPAP1-204ENST00000562303 SCRT2Q9NQ03 307 aa9.02□□□□□ -0.97
RPAP1-204ENST00000562303 MRPL27Q9P0M9 148 aaKnown RBP9.02□□□□□ -0.97
RPAP1-204ENST00000562303 CHD5Q8TDI0 1954 aa9.02□□□□□ -0.97
RPAP1-204ENST00000562303 ALPK2Q86TB3 2170 aa9.02□□□□□ -0.97
RPAP1-204ENST00000562303 C2orf66Q6UXQ4 117 aa9.02□□□□□ -0.97
RPAP1-204ENST00000562303 CEP250Q9BV73 2442 aa9.02□□□□□ -0.97
RPAP1-204ENST00000562303 KIR3DS1Q14943 382 aa9.02□□□□□ -0.97
RPAP1-204ENST00000562303 IGKV2D-24A0A075B6R9 120 aa9.02□□□□□ -0.97
RPAP1-204ENST00000562303 IGKV1OR2-108A0A075B7D4 117 aa9.01□□□□□ -0.97
RPAP1-204ENST00000562303 C1orf194Q5T5A4 169 aa9.01□□□□□ -0.97
RPAP1-204ENST00000562303 CLPSL2Q6UWE3 100 aa9.01□□□□□ -0.97
RPAP1-204ENST00000562303 Q6ZS49 121 aa9.01□□□□□ -0.97
RPAP1-204ENST00000562303 FOXL2NBQ6ZUU3 175 aa9.01□□□□□ -0.97
RPAP1-204ENST00000562303 HLA-DRB4P13762 266 aa9.01□□□□□ -0.97
RPAP1-204ENST00000562303 HLA-DRB4X5D2U9 266 aa9.01□□□□□ -0.97
RPAP1-204ENST00000562303 BRWD3Q6RI45 1802 aa9.01□□□□□ -0.97
RPAP1-204ENST00000562303 DKK4Q9UBT3 224 aa9.01□□□□□ -0.97
RPAP1-204ENST00000562303 IGFL3Q6UXB1 125 aa9.01□□□□□ -0.97
RPAP1-204ENST00000562303 SDHAF1A6NFY7 115 aa9□□□□□ -0.97
RPAP1-204ENST00000562303 PRSS46E5RG02 174 aa9□□□□□ -0.97
RPAP1-204ENST00000562303 CD5LO43866 347 aa9□□□□□ -0.97
RPAP1-204ENST00000562303 IGKV1-39P01597 117 aa9□□□□□ -0.97
RPAP1-204ENST00000562303 IGKV1D-39P04432 117 aa9□□□□□ -0.97
RPAP1-204ENST00000562303 MPV17L2Q567V2 206 aa9□□□□□ -0.97
RPAP1-204ENST00000562303 Q6ZRM9 215 aa9□□□□□ -0.97
RPAP1-204ENST00000562303 ZNF833PQ6ZTB9 187 aa9□□□□□ -0.97
RPAP1-204ENST00000562303 QRFPP83859 136 aa9□□□□□ -0.97
RPAP1-204ENST00000562303 NDUFA4L2Q9NRX3 87 aa9□□□□□ -0.97
RPAP1-204ENST00000562303 A0A0J9YY99 117 aa9□□□□□ -0.97
RPAP1-204ENST00000562303 CRLF1O75462 422 aa9□□□□□ -0.97
RPAP1-204ENST00000562303 STPG4Q8N801 248 aa9□□□□□ -0.97
RPAP1-204ENST00000562303 TRBV19A0A075B6N1 114 aa8.99□□□□□ -0.97
RPAP1-204ENST00000562303 ELANEP08246 267 aa8.99□□□□□ -0.97
RPAP1-204ENST00000562303 TEX36Q5VZQ5 186 aa8.99□□□□□ -0.97
RPAP1-204ENST00000562303 Q8N8P6 123 aa8.99□□□□□ -0.97
RPAP1-204ENST00000562303 SMIM2Q9BVW6 85 aa8.99□□□□□ -0.97
RPAP1-204ENST00000562303 LOXP28300 417 aaPredicted RBP8.99□□□□□ -0.97
RPAP1-204ENST00000562303 ZNF492Q9P255 531 aa8.99□□□□□ -0.97
RPAP1-204ENST00000562303 TRAV26-2A0A0B4J265 109 aa8.99□□□□□ -0.97
RPAP1-204ENST00000562303 COLCA2A8K830 154 aa8.99□□□□□ -0.97
RPAP1-204ENST00000562303 FAM120AOSQ5T036 256 aa8.99□□□□□ -0.97
RPAP1-204ENST00000562303 DUX4L9Q6RFH8 374 aaPredicted RBP8.99□□□□□ -0.97
RPAP1-204ENST00000562303 TSSC4Q9Y5U2 329 aaPredicted RBP8.99□□□□□ -0.97
RPAP1-204ENST00000562303 NDUFS5O43920 106 aa8.99□□□□□ -0.97
RPAP1-204ENST00000562303 TCF15Q12870 199 aa8.99□□□□□ -0.97
RPAP1-204ENST00000562303 TMEM14BQ9NUH8 114 aa8.99□□□□□ -0.97
RPAP1-204ENST00000562303 HAMPP81172 84 aa8.98□□□□□ -0.97
RPAP1-204ENST00000562303 Q9HAA7 133 aa8.98□□□□□ -0.97
RPAP1-204ENST00000562303 SPTBN2O15020 2390 aa8.98□□□□□ -0.97
RPAP1-204ENST00000562303 CACNA1BQ00975 2339 aa8.98□□□□□ -0.97
RPAP1-204ENST00000562303 SLAQ13239 276 aa8.98□□□□□ -0.97
RPAP1-204ENST00000562303 PDCD11Q14690 1871 aaKnown RBP8.98□□□□□ -0.97
RPAP1-204ENST00000562303 IGHV7-4-1A0A0J9YVY3 117 aa8.98□□□□□ -0.97
RPAP1-204ENST00000562303 INAFM2P0DMQ5 153 aa8.98□□□□□ -0.97
RPAP1-204ENST00000562303 FAM104BQ5XKR9 115 aa8.98□□□□□ -0.97
RPAP1-204ENST00000562303 CACNA1DQ01668 2161 aa8.98□□□□□ -0.97
RPAP1-204ENST00000562303 IGLV2-23P01705 113 aa8.97□□□□□ -0.97
RPAP1-204ENST00000562303 Q6ZR03 302 aa8.97□□□□□ -0.97
RPAP1-204ENST00000562303 LOC285556D6RIA3 1793 aa8.97□□□□□ -0.97
RPAP1-204ENST00000562303 SPTBN1Q01082 2364 aaKnown RBP8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms