RNA–Protein interactions for RNA: ENST00000558970.2

GABPB1-208, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 5

Gene GABPB1, Length 730 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-208ENST00000558970 PRAC2D3DTV9 90 aa9.18□□□□□ -0.94
GABPB1-208ENST00000558970 H2AFB1P0C5Y9 115 aa9.18□□□□□ -0.94
GABPB1-208ENST00000558970 SULT1A2P50226 295 aa9.18□□□□□ -0.94
GABPB1-208ENST00000558970 FXYD7P58549 80 aa9.18□□□□□ -0.94
GABPB1-208ENST00000558970 PSG9Q00887 426 aa9.18□□□□□ -0.94
GABPB1-208ENST00000558970 HIST1H1AQ02539 215 aaPredicted RBP9.18□□□□□ -0.94
GABPB1-208ENST00000558970 EBLN2Q6P2I7 272 aa9.18□□□□□ -0.94
GABPB1-208ENST00000558970 FAM110AQ9BQ89 295 aa9.18□□□□□ -0.94
GABPB1-208ENST00000558970 LOC102724200A0A096LPH7 203 aaPredicted RBP9.17□□□□□ -0.94
GABPB1-208ENST00000558970 ZNF705EA8MWA4 302 aaPredicted RBP9.17□□□□□ -0.94
GABPB1-208ENST00000558970 ZNF253O75346 499 aa9.17□□□□□ -0.94
GABPB1-208ENST00000558970 PDE6HQ13956 83 aa9.17□□□□□ -0.94
GABPB1-208ENST00000558970 DPPA3Q6W0C5 159 aa9.17□□□□□ -0.94
GABPB1-208ENST00000558970 PCNPQ8WW12 178 aaKnown RBP9.17□□□□□ -0.94
GABPB1-208ENST00000558970 SAV1Q9H4B6 383 aaPredicted RBP9.17□□□□□ -0.94
GABPB1-208ENST00000558970 IGKV2-40A0A087WW87 121 aaPredicted RBP9.16□□□□□ -0.94
GABPB1-208ENST00000558970 A0A0J9YX75 114 aa9.16□□□□□ -0.94
GABPB1-208ENST00000558970 PGPA6NDG6 321 aa9.16□□□□□ -0.94
GABPB1-208ENST00000558970 IGKV2D-40P01614 121 aaPredicted RBP9.16□□□□□ -0.94
GABPB1-208ENST00000558970 RAB5CP51148 216 aa9.16□□□□□ -0.94
GABPB1-208ENST00000558970 CNN1P51911 297 aaKnown RBP9.16□□□□□ -0.94
GABPB1-208ENST00000558970 GNG5P63218 68 aa9.16□□□□□ -0.94
GABPB1-208ENST00000558970 FOXI2Q6ZQN5 318 aa9.16□□□□□ -0.94
GABPB1-208ENST00000558970 TMEM167BQ9NRX6 74 aa9.16□□□□□ -0.94
GABPB1-208ENST00000558970 H3BMM0 161 aa9.15□□□□□ -0.94
GABPB1-208ENST00000558970 SLC25A5P05141 298 aaKnown RBP9.15□□□□□ -0.94
GABPB1-208ENST00000558970 HLA-DRB4P13762 266 aa9.15□□□□□ -0.94
GABPB1-208ENST00000558970 CCL20P78556 96 aa9.15□□□□□ -0.94
GABPB1-208ENST00000558970 ERCC8Q13216 396 aa9.15□□□□□ -0.94
GABPB1-208ENST00000558970 HAGHQ16775 308 aa9.15□□□□□ -0.94
GABPB1-208ENST00000558970 TRPT1Q86TN4 253 aaKnown RBP9.15□□□□□ -0.94
GABPB1-208ENST00000558970 SBSPONQ8IVN8 264 aa9.15□□□□□ -0.94
GABPB1-208ENST00000558970 OR8A1Q8NGG7 326 aa9.15□□□□□ -0.94
GABPB1-208ENST00000558970 MBD3L1Q8WWY6 194 aa9.15□□□□□ -0.94
GABPB1-208ENST00000558970 SLC35B3Q9H1N7 401 aa9.15□□□□□ -0.94
GABPB1-208ENST00000558970 RETNQ9HD89 108 aa9.15□□□□□ -0.94
GABPB1-208ENST00000558970 OTORQ9NRC9 128 aa9.15□□□□□ -0.94
GABPB1-208ENST00000558970 YTHDF2Q9Y5A9 579 aaKnown RBP9.15□□□□□ -0.94
GABPB1-208ENST00000558970 HLA-DRB4X5D2U9 266 aa9.15□□□□□ -0.94
GABPB1-208ENST00000558970 J3KRW8 73 aa9.14□□□□□ -0.95
GABPB1-208ENST00000558970 CA1P00915 261 aaPredicted RBP9.14□□□□□ -0.95
GABPB1-208ENST00000558970 CSN1S1P47710 185 aa9.14□□□□□ -0.95
GABPB1-208ENST00000558970 SUMO1P63165 101 aaKnown RBP9.14□□□□□ -0.95
GABPB1-208ENST00000558970 CST9LP1Q5W188 147 aa9.14□□□□□ -0.95
GABPB1-208ENST00000558970 OR10J6PQ8NGY7 276 aa9.14□□□□□ -0.95
GABPB1-208ENST00000558970 CMTM2Q8TAZ6 248 aa9.14□□□□□ -0.95
GABPB1-208ENST00000558970 PPP1R14DQ9NXH3 145 aa9.14□□□□□ -0.95
GABPB1-208ENST00000558970 CLEC5AQ9NY25 188 aa9.14□□□□□ -0.95
GABPB1-208ENST00000558970 A8MZ25 164 aa9.13□□□□□ -0.95
GABPB1-208ENST00000558970 GGTLC3B5MD39 225 aa9.13□□□□□ -0.95
GABPB1-208ENST00000558970 M0R2Z0 102 aa9.13□□□□□ -0.95
GABPB1-208ENST00000558970 PAGE4O60829 102 aa9.13□□□□□ -0.95
GABPB1-208ENST00000558970 IFNA7P01567 189 aa9.13□□□□□ -0.95
GABPB1-208ENST00000558970 ATP5G3P48201 142 aa9.13□□□□□ -0.95
GABPB1-208ENST00000558970 APOC4P55056 127 aa9.13□□□□□ -0.95
GABPB1-208ENST00000558970 DEFB135Q30KP9 77 aa9.13□□□□□ -0.95
GABPB1-208ENST00000558970 TEX261Q6UWH6 196 aa9.13□□□□□ -0.95
GABPB1-208ENST00000558970 LYPD1Q8N2G4 141 aa9.13□□□□□ -0.95
GABPB1-208ENST00000558970 SGK494Q96LW2 274 aa9.13□□□□□ -0.95
GABPB1-208ENST00000558970 GNG13Q9P2W3 67 aa9.13□□□□□ -0.95
GABPB1-208ENST00000558970 XCL2Q9UBD3 114 aa9.13□□□□□ -0.95
GABPB1-208ENST00000558970 PRELID1Q9Y255 219 aa9.13□□□□□ -0.95
GABPB1-208ENST00000558970 KMT2CQ8NEZ4 4911 aaKnown RBP9.13□□□□□ -0.95
GABPB1-208ENST00000558970 FAM74A7A6NL05 159 aa9.12□□□□□ -0.95
GABPB1-208ENST00000558970 DIRC3C9JPN6 131 aa9.12□□□□□ -0.95
GABPB1-208ENST00000558970 TEX46H3BTG2 121 aa9.12□□□□□ -0.95
GABPB1-208ENST00000558970 DUSP14O95147 198 aaKnown RBP9.12□□□□□ -0.95
GABPB1-208ENST00000558970 SPINK13Q1W4C9 94 aa9.12□□□□□ -0.95
GABPB1-208ENST00000558970 LINC00322Q6ZN03 302 aaPredicted RBP9.12□□□□□ -0.95
GABPB1-208ENST00000558970 GOLT1AQ6ZVE7 132 aa9.12□□□□□ -0.95
GABPB1-208ENST00000558970 ZNF680Q8NEM1 530 aa9.12□□□□□ -0.95
GABPB1-208ENST00000558970 Q8TAT8 98 aa9.12□□□□□ -0.95
GABPB1-208ENST00000558970 SUN5Q8TC36 379 aa9.12□□□□□ -0.95
GABPB1-208ENST00000558970 MRPL53Q96EL3 112 aaKnown RBP9.12□□□□□ -0.95
GABPB1-208ENST00000558970 VGLL1Q99990 258 aa9.12□□□□□ -0.95
GABPB1-208ENST00000558970 B9D2Q9BPU9 175 aa9.12□□□□□ -0.95
GABPB1-208ENST00000558970 CSTL1Q9H114 145 aa9.12□□□□□ -0.95
GABPB1-208ENST00000558970 TRAV12-2A0A075B6T6 113 aa9.11□□□□□ -0.95
GABPB1-208ENST00000558970 TRAV8-1A0A0A6YYK1 113 aa9.11□□□□□ -0.95
GABPB1-208ENST00000558970 A0A1W2PRE2 83 aa9.11□□□□□ -0.95
GABPB1-208ENST00000558970 HBE1P02100 147 aa9.11□□□□□ -0.95
GABPB1-208ENST00000558970 BLOC1S1P78537 153 aa9.11□□□□□ -0.95
GABPB1-208ENST00000558970 C5orf17Q8NAS9 161 aa9.11□□□□□ -0.95
GABPB1-208ENST00000558970 IGHV3OR16-12A0A075B7B8 117 aa9.1□□□□□ -0.95
GABPB1-208ENST00000558970 NPIPB6E9PJ23 425 aa9.1□□□□□ -0.95
GABPB1-208ENST00000558970 NUTF2P61970 127 aaKnown RBP9.1□□□□□ -0.95
GABPB1-208ENST00000558970 TMEM78Q5T7P6 136 aa9.1□□□□□ -0.95
GABPB1-208ENST00000558970 RXFP4Q8TDU9 374 aa9.1□□□□□ -0.95
GABPB1-208ENST00000558970 AGPAT4-IT1Q9H0P7 198 aa9.1□□□□□ -0.95
GABPB1-208ENST00000558970 COL7A1Q02388 2944 aa9.09□□□□□ -0.95
GABPB1-208ENST00000558970 TCRAP04437 139 aa9.09□□□□□ -0.95
GABPB1-208ENST00000558970 CT45A10P0DMU9 189 aa9.09□□□□□ -0.95
GABPB1-208ENST00000558970 KIR3DS1Q14943 382 aa9.09□□□□□ -0.95
GABPB1-208ENST00000558970 MORN3Q6PF18 240 aaPredicted RBP9.09□□□□□ -0.95
GABPB1-208ENST00000558970 AMTNQ6UX39 209 aa9.09□□□□□ -0.95
GABPB1-208ENST00000558970 MANBALQ9NQG1 85 aa9.09□□□□□ -0.95
GABPB1-208ENST00000558970 EPDR1Q9UM22 224 aa9.09□□□□□ -0.95
GABPB1-208ENST00000558970 DNAH9Q9NYC9 4486 aa9.09□□□□□ -0.95
GABPB1-208ENST00000558970 TRAV1-1A0A0B4J248 108 aa9.08□□□□□ -0.96
GABPB1-208ENST00000558970 TRAV34A0A0B4J273 112 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 180.3 ms