RNA–Protein interactions for RNA: ENST00000558868.5

TPM1-215, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-215ENST00000558868 SMPXQ9UHP9 88 aa10.54□□□□□ -0.72
TPM1-215ENST00000558868 URGCP-MRPS24S4R325 110 aa10.54□□□□□ -0.72
TPM1-215ENST00000558868 FN1P02751 2386 aaKnown RBP10.53□□□□□ -0.72
TPM1-215ENST00000558868 TRAV9-1A0A075B6T8 112 aa10.53□□□□□ -0.72
TPM1-215ENST00000558868 IGHV3OR16-13A0A075B7E8 117 aa10.53□□□□□ -0.72
TPM1-215ENST00000558868 IGHV3-49A0A0A0MS15 119 aa10.53□□□□□ -0.72
TPM1-215ENST00000558868 IGHV3-74A0A0B4J1X5 117 aa10.53□□□□□ -0.72
TPM1-215ENST00000558868 FOXL1Q12952 345 aa10.53□□□□□ -0.72
TPM1-215ENST00000558868 Q86TA4 180 aa10.53□□□□□ -0.72
TPM1-215ENST00000558868 TMEM183AQ8IXX5 376 aa10.53□□□□□ -0.72
TPM1-215ENST00000558868 C4orf3Q8WVX3 66 aa10.53□□□□□ -0.72
TPM1-215ENST00000558868 FAM210BQ96KR6 192 aa10.53□□□□□ -0.72
TPM1-215ENST00000558868 A8MWP6 167 aa10.52□□□□□ -0.73
TPM1-215ENST00000558868 C1orf196B1AJZ1 125 aa10.52□□□□□ -0.73
TPM1-215ENST00000558868 NDUFA7O95182 113 aa10.52□□□□□ -0.73
TPM1-215ENST00000558868 RPL19P84098 196 aaKnown RBP10.52□□□□□ -0.73
TPM1-215ENST00000558868 OR5I1Q13606 314 aa10.52□□□□□ -0.73
TPM1-215ENST00000558868 TM4SF20Q53R12 229 aa10.52□□□□□ -0.73
TPM1-215ENST00000558868 IBA57Q5T440 356 aaKnown RBP10.52□□□□□ -0.73
TPM1-215ENST00000558868 LCN12Q6JVE5 192 aa10.52□□□□□ -0.73
TPM1-215ENST00000558868 C8orf86Q6ZUL3 223 aa10.52□□□□□ -0.73
TPM1-215ENST00000558868 PRNTQ86SH4 94 aa10.52□□□□□ -0.73
TPM1-215ENST00000558868 C1QL4Q86Z23 238 aa10.52□□□□□ -0.73
TPM1-215ENST00000558868 MLST8Q9BVC4 326 aa10.52□□□□□ -0.73
TPM1-215ENST00000558868 RHPN1-AS1Q9BWJ2 59 aa10.52□□□□□ -0.73
TPM1-215ENST00000558868 IL36BQ9NZH7 164 aa10.52□□□□□ -0.73
TPM1-215ENST00000558868 ZNF492Q9P255 531 aa10.52□□□□□ -0.73
TPM1-215ENST00000558868 MLXQ9UH92 298 aa10.52□□□□□ -0.73
TPM1-215ENST00000558868 PSG8Q9UQ74 426 aa10.52□□□□□ -0.73
TPM1-215ENST00000558868 SVEP1Q4LDE5 3571 aa10.51□□□□□ -0.73
TPM1-215ENST00000558868 IGHV4OR15-8A0A075B7B6 117 aa10.51□□□□□ -0.73
TPM1-215ENST00000558868 A0A087WW49 117 aa10.51□□□□□ -0.73
TPM1-215ENST00000558868 RBAKDNA6NC62 111 aa10.51□□□□□ -0.73
TPM1-215ENST00000558868 LINC01619G3V211 115 aa10.51□□□□□ -0.73
TPM1-215ENST00000558868 M0R3E3 92 aa10.51□□□□□ -0.73
TPM1-215ENST00000558868 CHEK1O14757 476 aa10.51□□□□□ -0.73
TPM1-215ENST00000558868 GATCO43716 136 aaKnown RBP10.51□□□□□ -0.73
TPM1-215ENST00000558868 IGLV2-11P01706 119 aa10.51□□□□□ -0.73
TPM1-215ENST00000558868 SAPCD1Q5SSQ6 148 aa10.51□□□□□ -0.73
TPM1-215ENST00000558868 DPF1Q92782 380 aa10.51□□□□□ -0.73
TPM1-215ENST00000558868 DAZAP1Q96EP5 407 aaKnown RBP10.51□□□□□ -0.73
TPM1-215ENST00000558868 C16orf92Q96LL3 132 aa10.51□□□□□ -0.73
TPM1-215ENST00000558868 PYGO2Q9BRQ0 406 aa10.51□□□□□ -0.73
TPM1-215ENST00000558868 ATRQ13535 2644 aa10.51□□□□□ -0.73
TPM1-215ENST00000558868 MXRA5Q9NR99 2828 aa10.5□□□□□ -0.73
TPM1-215ENST00000558868 TGIF2-C20orf24A0A0A6YYL0 155 aa10.5□□□□□ -0.73
TPM1-215ENST00000558868 M0QZ24 198 aa10.5□□□□□ -0.73
TPM1-215ENST00000558868 CXCL1P09341 107 aa10.5□□□□□ -0.73
TPM1-215ENST00000558868 HOXD3P31249 432 aaPredicted RBP10.5□□□□□ -0.73
TPM1-215ENST00000558868 RPS10P46783 165 aaKnown RBP10.5□□□□□ -0.73
TPM1-215ENST00000558868 RAB5BP61020 215 aa10.5□□□□□ -0.73
TPM1-215ENST00000558868 KHDC1LQ5JSQ8 128 aa10.5□□□□□ -0.73
TPM1-215ENST00000558868 NHLRC2Q8NBF2 726 aa10.5□□□□□ -0.73
TPM1-215ENST00000558868 WIPF2Q8TF74 440 aaPredicted RBP10.5□□□□□ -0.73
TPM1-215ENST00000558868 SGK494Q96LW2 274 aa10.5□□□□□ -0.73
TPM1-215ENST00000558868 NDFIP1Q9BT67 221 aa10.5□□□□□ -0.73
TPM1-215ENST00000558868 NRN1Q9NPD7 142 aa10.5□□□□□ -0.73
TPM1-215ENST00000558868 V9GYV3 84 aa10.5□□□□□ -0.73
TPM1-215ENST00000558868 TLN2Q9Y4G6 2542 aa10.5□□□□□ -0.73
TPM1-215ENST00000558868 ZNF469Q96JG9 3925 aaPredicted RBP10.5□□□□□ -0.73
TPM1-215ENST00000558868 TRAV8-1A0A0A6YYK1 113 aa10.49□□□□□ -0.73
TPM1-215ENST00000558868 A0A1W2PPQ1 181 aa10.49□□□□□ -0.73
TPM1-215ENST00000558868 ZNF705GA8MUZ8 300 aaPredicted RBP10.49□□□□□ -0.73
TPM1-215ENST00000558868 TCF21O43680 179 aa10.49□□□□□ -0.73
TPM1-215ENST00000558868 RPL11P62913 178 aaKnown RBP10.49□□□□□ -0.73
TPM1-215ENST00000558868 KLF5Q13887 457 aaPredicted RBP10.49□□□□□ -0.73
TPM1-215ENST00000558868 GBGT1Q8N5D6 347 aa10.49□□□□□ -0.73
TPM1-215ENST00000558868 OR1N2Q8NGR9 330 aa10.49□□□□□ -0.73
TPM1-215ENST00000558868 LINC01006Q8NI28 216 aa10.49□□□□□ -0.73
TPM1-215ENST00000558868 RNASE7Q9H1E1 156 aaKnown RBP10.49□□□□□ -0.73
TPM1-215ENST00000558868 TRAV8-2A0A0B4J237 113 aa10.48□□□□□ -0.73
TPM1-215ENST00000558868 TMEM213A2RRL7 107 aa10.48□□□□□ -0.73
TPM1-215ENST00000558868 CT45A10P0DMU9 189 aa10.48□□□□□ -0.73
TPM1-215ENST00000558868 ID1P41134 155 aa10.48□□□□□ -0.73
TPM1-215ENST00000558868 SYNJ2BPP57105 145 aa10.48□□□□□ -0.73
TPM1-215ENST00000558868 CT83Q5H943 113 aa10.48□□□□□ -0.73
TPM1-215ENST00000558868 PRR27Q6MZM9 219 aa10.48□□□□□ -0.73
TPM1-215ENST00000558868 TCF24Q7RTU0 167 aa10.48□□□□□ -0.73
TPM1-215ENST00000558868 KLHL30-AS1Q8NEE0 82 aa10.48□□□□□ -0.73
TPM1-215ENST00000558868 NUDT10Q8NFP7 164 aa10.48□□□□□ -0.73
TPM1-215ENST00000558868 OR4B1Q8NGF8 309 aa10.48□□□□□ -0.73
TPM1-215ENST00000558868 NUDT11Q96G61 164 aa10.48□□□□□ -0.73
TPM1-215ENST00000558868 SRD5A3Q9H8P0 318 aa10.48□□□□□ -0.73
TPM1-215ENST00000558868 PEMTQ9UBM1 199 aa10.48□□□□□ -0.73
TPM1-215ENST00000558868 IGKV2-40A0A087WW87 121 aaPredicted RBP10.47□□□□□ -0.73
TPM1-215ENST00000558868 OVOL1O14753 267 aa10.47□□□□□ -0.73
TPM1-215ENST00000558868 IGKV2D-40P01614 121 aaPredicted RBP10.47□□□□□ -0.73
TPM1-215ENST00000558868 P01737 135 aa10.47□□□□□ -0.73
TPM1-215ENST00000558868 TYMSP04818 313 aa10.47□□□□□ -0.73
TPM1-215ENST00000558868 FAM3BP58499 235 aaPredicted RBP10.47□□□□□ -0.73
TPM1-215ENST00000558868 TCTEX1D4Q5JR98 221 aa10.47□□□□□ -0.73
TPM1-215ENST00000558868 IGFL4Q6B9Z1 124 aa10.47□□□□□ -0.73
TPM1-215ENST00000558868 COX8CQ7Z4L0 72 aa10.47□□□□□ -0.73
TPM1-215ENST00000558868 OR11H1Q8NG94 326 aa10.47□□□□□ -0.73
TPM1-215ENST00000558868 TSSC4Q9Y5U2 329 aaPredicted RBP10.47□□□□□ -0.73
TPM1-215ENST00000558868 SONP18583 2426 aaKnown RBP10.47□□□□□ -0.73
TPM1-215ENST00000558868 HIVEP2P31629 2446 aa10.47□□□□□ -0.73
TPM1-215ENST00000558868 ACANP16112 2415 aa10.46□□□□□ -0.73
TPM1-215ENST00000558868 SMIM27A0A1W2PRY6 76 aa10.46□□□□□ -0.73
TPM1-215ENST00000558868 C19orf71A6NCJ1 209 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms