RNA–Protein interactions for RNA: ENST00000558561.1

SPG11-211, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-211ENST00000558561 TRGV9Q99603 122 aa3.05□□□□□ -1.92
SPG11-211ENST00000558561 LITAFQ99732 161 aa3.05□□□□□ -1.92
SPG11-211ENST00000558561 MGST2Q99735 147 aa3.05□□□□□ -1.92
SPG11-211ENST00000558561 C7orf50Q9BRJ6 194 aaKnown RBP3.05□□□□□ -1.92
SPG11-211ENST00000558561 RSG1Q9BU20 258 aa3.05□□□□□ -1.92
SPG11-211ENST00000558561 CCDC32Q9BV29 185 aa3.05□□□□□ -1.92
SPG11-211ENST00000558561 GGTLC1Q9BX51 225 aa3.05□□□□□ -1.92
SPG11-211ENST00000558561 WFDC1Q9HC57 220 aa3.05□□□□□ -1.92
SPG11-211ENST00000558561 OR5AC2Q9NZP5 309 aa3.05□□□□□ -1.92
SPG11-211ENST00000558561 STRAPQ9Y3F4 350 aaKnown RBP3.05□□□□□ -1.92
SPG11-211ENST00000558561 KMT2AQ03164 3969 aa3.04□□□□□ -1.92
SPG11-211ENST00000558561 DNAH1Q9P2D7 4330 aa3.04□□□□□ -1.92
SPG11-211ENST00000558561 NACAE9PAV3 2078 aa3.04□□□□□ -1.92
SPG11-211ENST00000558561 SMCO3A2RU48 225 aa3.04□□□□□ -1.92
SPG11-211ENST00000558561 OR4C46A6NHA9 309 aa3.04□□□□□ -1.92
SPG11-211ENST00000558561 H3BQ15 152 aa3.04□□□□□ -1.92
SPG11-211ENST00000558561 CORTO00230 105 aa3.04□□□□□ -1.92
SPG11-211ENST00000558561 GOSR2O14653 212 aa3.04□□□□□ -1.92
SPG11-211ENST00000558561 MRPS12O15235 138 aaKnown RBP3.04□□□□□ -1.92
SPG11-211ENST00000558561 IFNA21P01568 189 aa3.04□□□□□ -1.92
SPG11-211ENST00000558561 EIF2B2P49770 351 aaKnown RBP3.04□□□□□ -1.92
SPG11-211ENST00000558561 RAB11AP62491 216 aa3.04□□□□□ -1.92
SPG11-211ENST00000558561 SRPXP78539 464 aa3.04□□□□□ -1.92
SPG11-211ENST00000558561 FGL1Q08830 312 aa3.04□□□□□ -1.92
SPG11-211ENST00000558561 GCSAMLQ5JQS6 135 aa3.04□□□□□ -1.92
SPG11-211ENST00000558561 SPATA31B1PQ5VZV4 182 aa3.04□□□□□ -1.92
SPG11-211ENST00000558561 SIGLEC15Q6ZMC9 328 aa3.04□□□□□ -1.92
SPG11-211ENST00000558561 Q6ZQT7 251 aa3.04□□□□□ -1.92
SPG11-211ENST00000558561 CYP2G1PQ6ZSU1 146 aa3.04□□□□□ -1.92
SPG11-211ENST00000558561 TMEM144Q7Z5S9 345 aa3.04□□□□□ -1.92
SPG11-211ENST00000558561 TMEM252Q8N6L7 170 aa3.04□□□□□ -1.92
SPG11-211ENST00000558561 OR1B1Q8NGR6 318 aa3.04□□□□□ -1.92
SPG11-211ENST00000558561 OR11H2Q8NH07 326 aa3.04□□□□□ -1.92
SPG11-211ENST00000558561 DEDD2Q8WXF8 326 aa3.04□□□□□ -1.92
SPG11-211ENST00000558561 S100ZQ8WXG8 99 aa3.04□□□□□ -1.92
SPG11-211ENST00000558561 MARVELD1Q9BSK0 173 aa3.04□□□□□ -1.92
SPG11-211ENST00000558561 PARD6GQ9BYG4 376 aaPredicted RBP3.04□□□□□ -1.92
SPG11-211ENST00000558561 ARL6Q9H0F7 186 aa3.04□□□□□ -1.92
SPG11-211ENST00000558561 SLC35B3Q9H1N7 401 aa3.04□□□□□ -1.92
SPG11-211ENST00000558561 SLC25A22Q9H936 323 aa3.04□□□□□ -1.92
SPG11-211ENST00000558561 XCL2Q9UBD3 114 aa3.04□□□□□ -1.92
SPG11-211ENST00000558561 RYR2Q92736 4967 aa3.04□□□□□ -1.92
SPG11-211ENST00000558561 H3BMM0 161 aa3.03□□□□□ -1.92
SPG11-211ENST00000558561 AGPAT2O15120 278 aa3.03□□□□□ -1.92
SPG11-211ENST00000558561 MED6O75586 246 aa3.03□□□□□ -1.92
SPG11-211ENST00000558561 DEDDO75618 318 aa3.03□□□□□ -1.92
SPG11-211ENST00000558561 CA1P00915 261 aaPredicted RBP3.03□□□□□ -1.92
SPG11-211ENST00000558561 BCAP31P51572 246 aa3.03□□□□□ -1.92
SPG11-211ENST00000558561 S100A10P60903 97 aa3.03□□□□□ -1.92
SPG11-211ENST00000558561 PAFAH1B2P68402 229 aa3.03□□□□□ -1.92
SPG11-211ENST00000558561 DLK1P80370 383 aa3.03□□□□□ -1.92
SPG11-211ENST00000558561 AKR1C1Q04828 323 aa3.03□□□□□ -1.92
SPG11-211ENST00000558561 ZNF415Q09FC8 603 aa3.03□□□□□ -1.92
SPG11-211ENST00000558561 FCN2Q15485 313 aa3.03□□□□□ -1.92
SPG11-211ENST00000558561 VWC2Q2TAL6 325 aa3.03□□□□□ -1.92
SPG11-211ENST00000558561 LRRC37A5PQ49AS3 106 aa3.03□□□□□ -1.92
SPG11-211ENST00000558561 FFAR4Q5NUL3 377 aa3.03□□□□□ -1.92
SPG11-211ENST00000558561 ETFRF1Q6IPR1 90 aa3.03□□□□□ -1.92
SPG11-211ENST00000558561 OR8I2Q8N0Y5 310 aa3.03□□□□□ -1.92
SPG11-211ENST00000558561 C1orf158Q8N1D5 194 aa3.03□□□□□ -1.92
SPG11-211ENST00000558561 OR11H4Q8NGC9 324 aa3.03□□□□□ -1.92
SPG11-211ENST00000558561 PRAC1Q96KF2 57 aa3.03□□□□□ -1.92
SPG11-211ENST00000558561 RARRES2Q99969 163 aa3.03□□□□□ -1.92
SPG11-211ENST00000558561 GINS3Q9BRX5 216 aa3.03□□□□□ -1.92
SPG11-211ENST00000558561 SLC25A39Q9BZJ4 359 aaPredicted RBP3.03□□□□□ -1.92
SPG11-211ENST00000558561 NPVFQ9HCQ7 196 aa3.03□□□□□ -1.92
SPG11-211ENST00000558561 CELA1Q9UNI1 258 aa3.03□□□□□ -1.92
SPG11-211ENST00000558561 ALG5Q9Y673 324 aa3.03□□□□□ -1.92
SPG11-211ENST00000558561 TRAV12-2A0A075B6T6 113 aa3.02□□□□□ -1.93
SPG11-211ENST00000558561 A0A1W2PPQ1 181 aa3.02□□□□□ -1.93
SPG11-211ENST00000558561 HELTA6NFD8 242 aa3.02□□□□□ -1.93
SPG11-211ENST00000558561 C3orf84H3BNL1 204 aa3.02□□□□□ -1.93
SPG11-211ENST00000558561 SMLR1H3BR10 107 aa3.02□□□□□ -1.93
SPG11-211ENST00000558561 H3BRN7 92 aa3.02□□□□□ -1.93
SPG11-211ENST00000558561 L7N2F9 121 aa3.02□□□□□ -1.93
SPG11-211ENST00000558561 SLC17A3O00476 420 aa3.02□□□□□ -1.93
SPG11-211ENST00000558561 UBE2CO00762 179 aa3.02□□□□□ -1.93
SPG11-211ENST00000558561 CRXO43186 299 aaPredicted RBP3.02□□□□□ -1.93
SPG11-211ENST00000558561 TSC22D2O75157 780 aa3.02□□□□□ -1.93
SPG11-211ENST00000558561 GAS8-AS1O95177 125 aa3.02□□□□□ -1.93
SPG11-211ENST00000558561 OR5G3P0C626 314 aa3.02□□□□□ -1.93
SPG11-211ENST00000558561 AZU1P20160 251 aa3.02□□□□□ -1.93
SPG11-211ENST00000558561 CAV2P51636 162 aa3.02□□□□□ -1.93
SPG11-211ENST00000558561 ATP5IP56385 69 aaPredicted RBP3.02□□□□□ -1.93
SPG11-211ENST00000558561 PLP1P60201 277 aa3.02□□□□□ -1.93
SPG11-211ENST00000558561 OPCMLQ14982 345 aa3.02□□□□□ -1.93
SPG11-211ENST00000558561 FAM78BQ5VT40 261 aa3.02□□□□□ -1.93
SPG11-211ENST00000558561 AMTNQ6UX39 209 aa3.02□□□□□ -1.93
SPG11-211ENST00000558561 LINC00299Q6ZSB3 139 aa3.02□□□□□ -1.93
SPG11-211ENST00000558561 NOTCH2NLQ7Z3S9 236 aa3.02□□□□□ -1.93
SPG11-211ENST00000558561 ZNF709Q8N972 641 aa3.02□□□□□ -1.93
SPG11-211ENST00000558561 OR11H7Q8NGC8 314 aa3.02□□□□□ -1.93
SPG11-211ENST00000558561 OR10P1Q8NGE3 313 aa3.02□□□□□ -1.93
SPG11-211ENST00000558561 OR4B1Q8NGF8 309 aa3.02□□□□□ -1.93
SPG11-211ENST00000558561 ENKURQ8TC29 256 aa3.02□□□□□ -1.93
SPG11-211ENST00000558561 PPP1R14BQ96C90 147 aa3.02□□□□□ -1.93
SPG11-211ENST00000558561 CIB3Q96Q77 187 aaPredicted RBP3.02□□□□□ -1.93
SPG11-211ENST00000558561 SHANK2-AS3Q9BTD1 123 aa3.02□□□□□ -1.93
SPG11-211ENST00000558561 SMIM3Q9BZL3 60 aa3.02□□□□□ -1.93
SPG11-211ENST00000558561 ARV1Q9H2C2 271 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 138.6 ms