RNA–Protein interactions for RNA: ENST00000557496.1

FOXN3-216, Transcript of forkhead box N3, humanhuman

TSL 5

Gene FOXN3, Length 228 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-216ENST00000557496 PCF11O94913 1555 aaKnown RBP-0.23□□□□□ -2.45
FOXN3-216ENST00000557496 TRPM1Q7Z4N2 1603 aa-0.23□□□□□ -2.45
FOXN3-216ENST00000557496 MYO7BQ6PIF6 2116 aa-0.23□□□□□ -2.45
FOXN3-216ENST00000557496 FLGP20930 4061 aaPredicted RBP-0.23□□□□□ -2.45
FOXN3-216ENST00000557496 NBEAL1Q6ZS30 2694 aa-0.23□□□□□ -2.45
FOXN3-216ENST00000557496 TGP01266 2768 aa-0.23□□□□□ -2.45
FOXN3-216ENST00000557496 LAMB1P07942 1786 aa-0.23□□□□□ -2.45
FOXN3-216ENST00000557496 A0A0J9YY99 117 aa-0.23□□□□□ -2.45
FOXN3-216ENST00000557496 DUXBA0A1W2PPF3 345 aa-0.23□□□□□ -2.45
FOXN3-216ENST00000557496 FAM159BA6NKW6 160 aa-0.23□□□□□ -2.45
FOXN3-216ENST00000557496 GPR31O00270 319 aa-0.23□□□□□ -2.45
FOXN3-216ENST00000557496 PDE6DO43924 150 aa-0.23□□□□□ -2.45
FOXN3-216ENST00000557496 CST8O60676 142 aa-0.23□□□□□ -2.45
FOXN3-216ENST00000557496 OR7C1O76099 320 aaPredicted RBP-0.23□□□□□ -2.45
FOXN3-216ENST00000557496 HAND1O96004 215 aa-0.23□□□□□ -2.45
FOXN3-216ENST00000557496 SPINK1P00995 79 aa-0.23□□□□□ -2.45
FOXN3-216ENST00000557496 IGHV3-33P01772 117 aa-0.23□□□□□ -2.45
FOXN3-216ENST00000557496 APOEP02649 317 aa-0.23□□□□□ -2.45
FOXN3-216ENST00000557496 HLA-EP13747 358 aa-0.23□□□□□ -2.45
FOXN3-216ENST00000557496 IDO1P14902 403 aa-0.23□□□□□ -2.45
FOXN3-216ENST00000557496 SRP14P37108 136 aaKnown RBP-0.23□□□□□ -2.45
FOXN3-216ENST00000557496 ANP32AP39687 249 aaKnown RBP-0.23□□□□□ -2.45
FOXN3-216ENST00000557496 TMBIM6P55061 237 aa-0.23□□□□□ -2.45
FOXN3-216ENST00000557496 MYL6P60660 151 aa-0.23□□□□□ -2.45
FOXN3-216ENST00000557496 FXYD3Q14802 87 aa-0.23□□□□□ -2.45
FOXN3-216ENST00000557496 POU6F1Q14863 301 aa-0.23□□□□□ -2.45
FOXN3-216ENST00000557496 C2orf82Q6UX34 121 aa-0.23□□□□□ -2.45
FOXN3-216ENST00000557496 CASC2Q6XLA1 102 aa-0.23□□□□□ -2.45
FOXN3-216ENST00000557496 ARPINQ7Z6K5 226 aa-0.23□□□□□ -2.45
FOXN3-216ENST00000557496 TEN1Q86WV5 123 aa-0.23□□□□□ -2.45
FOXN3-216ENST00000557496 OTUD6BQ8N6M0 293 aa-0.23□□□□□ -2.45
FOXN3-216ENST00000557496 C5orf56Q8N8D9 126 aa-0.23□□□□□ -2.45
FOXN3-216ENST00000557496 OR8J2Q8NGG1 315 aa-0.23□□□□□ -2.45
FOXN3-216ENST00000557496 OR51A2Q8NGJ7 313 aa-0.23□□□□□ -2.45
FOXN3-216ENST00000557496 OR5D16Q8NGK9 328 aa-0.23□□□□□ -2.45
FOXN3-216ENST00000557496 FAM172AQ8WUF8 416 aa-0.23□□□□□ -2.45
FOXN3-216ENST00000557496 PLEKHB2Q96CS7 222 aa-0.23□□□□□ -2.45
FOXN3-216ENST00000557496 MUCL1Q96DR8 90 aa-0.23□□□□□ -2.45
FOXN3-216ENST00000557496 ZHX1-C8orf76Q96EF9 292 aa-0.23□□□□□ -2.45
FOXN3-216ENST00000557496 DCUN1D1Q96GG9 259 aa-0.23□□□□□ -2.45
FOXN3-216ENST00000557496 PRAP1Q96NZ9 151 aa-0.23□□□□□ -2.45
FOXN3-216ENST00000557496 MRPS26Q9BYN8 205 aaKnown RBP-0.23□□□□□ -2.45
FOXN3-216ENST00000557496 LPAR5Q9H1C0 372 aa-0.23□□□□□ -2.45
FOXN3-216ENST00000557496 CTNNBIP1Q9NSA3 81 aaPredicted RBP-0.23□□□□□ -2.45
FOXN3-216ENST00000557496 USE1Q9NZ43 259 aa-0.23□□□□□ -2.45
FOXN3-216ENST00000557496 NOSIPQ9Y314 301 aaKnown RBP-0.23□□□□□ -2.45
FOXN3-216ENST00000557496 ARL5AQ9Y689 179 aa-0.23□□□□□ -2.45
FOXN3-216ENST00000557496 LY96Q9Y6Y9 160 aa-0.23□□□□□ -2.45
FOXN3-216ENST00000557496 U3KQA8 63 aa-0.23□□□□□ -2.45
FOXN3-216ENST00000557496 PDZD2O15018 2839 aa-0.23□□□□□ -2.45
FOXN3-216ENST00000557496 PKHD1P08F94 4074 aa-0.23□□□□□ -2.45
FOXN3-216ENST00000557496 RTL1A6NKG5 1358 aa-0.23□□□□□ -2.45
FOXN3-216ENST00000557496 ADCY9O60503 1353 aa-0.23□□□□□ -2.45
FOXN3-216ENST00000557496 CPDO75976 1380 aa-0.23□□□□□ -2.45
FOXN3-216ENST00000557496 LAMC3Q9Y6N6 1575 aa-0.23□□□□□ -2.45
FOXN3-216ENST00000557496 SVEP1Q4LDE5 3571 aa-0.24□□□□□ -2.45
FOXN3-216ENST00000557496 RREB1Q92766 1687 aa-0.24□□□□□ -2.45
FOXN3-216ENST00000557496 PCLOQ9Y6V0 5065 aa-0.24□□□□□ -2.45
FOXN3-216ENST00000557496 SPTA1P02549 2419 aa-0.24□□□□□ -2.45
FOXN3-216ENST00000557496 VIRMAQ69YN4 1812 aaKnown RBP-0.24□□□□□ -2.45
FOXN3-216ENST00000557496 KIF13AQ9H1H9 1805 aa-0.24□□□□□ -2.45
FOXN3-216ENST00000557496 ARFGEF1Q9Y6D6 1849 aa-0.24□□□□□ -2.45
FOXN3-216ENST00000557496 STAB2Q8WWQ8 2551 aa-0.24□□□□□ -2.45
FOXN3-216ENST00000557496 FLNBO75369 2602 aaKnown RBP-0.24□□□□□ -2.45
FOXN3-216ENST00000557496 TRBV19A0A075B6N1 114 aa-0.24□□□□□ -2.45
FOXN3-216ENST00000557496 TRAV27A0A087WT01 109 aa-0.24□□□□□ -2.45
FOXN3-216ENST00000557496 A0A096LNT2 108 aa-0.24□□□□□ -2.45
FOXN3-216ENST00000557496 TRGV10A0A0A0MS01 117 aa-0.24□□□□□ -2.45
FOXN3-216ENST00000557496 hDV103S1A0JD37 113 aa-0.24□□□□□ -2.45
FOXN3-216ENST00000557496 A6NN06 94 aa-0.24□□□□□ -2.45
FOXN3-216ENST00000557496 C17orf112F2Z3M2 114 aa-0.24□□□□□ -2.45
FOXN3-216ENST00000557496 J3QRK9 145 aa-0.24□□□□□ -2.45
FOXN3-216ENST00000557496 TFF1P04155 84 aa-0.24□□□□□ -2.45
FOXN3-216ENST00000557496 PRM1P04553 51 aa-0.24□□□□□ -2.45
FOXN3-216ENST00000557496 TPM3P06753 285 aa-0.24□□□□□ -2.45
FOXN3-216ENST00000557496 OR10J4P0C629 311 aa-0.24□□□□□ -2.45
FOXN3-216ENST00000557496 NFYBP25208 207 aa-0.24□□□□□ -2.45
FOXN3-216ENST00000557496 ERP29P30040 261 aaKnown RBP-0.24□□□□□ -2.45
FOXN3-216ENST00000557496 PHBP35232 272 aa-0.24□□□□□ -2.45
FOXN3-216ENST00000557496 RAB5CP51148 216 aa-0.24□□□□□ -2.45
FOXN3-216ENST00000557496 CAV3P56539 151 aa-0.24□□□□□ -2.45
FOXN3-216ENST00000557496 AP3S2P59780 193 aa-0.24□□□□□ -2.45
FOXN3-216ENST00000557496 ERVS71-1P61550 626 aa-0.24□□□□□ -2.45
FOXN3-216ENST00000557496 UBE2BP63146 152 aa-0.24□□□□□ -2.45
FOXN3-216ENST00000557496 ITGB3BPQ13352 177 aaPredicted RBP-0.24□□□□□ -2.45
FOXN3-216ENST00000557496 COTL1Q14019 142 aa-0.24□□□□□ -2.45
FOXN3-216ENST00000557496 KRTAP19-7Q3SYF9 63 aa-0.24□□□□□ -2.45
FOXN3-216ENST00000557496 AKIRIN2Q53H80 203 aa-0.24□□□□□ -2.45
FOXN3-216ENST00000557496 TMEM97Q5BJF2 176 aa-0.24□□□□□ -2.45
FOXN3-216ENST00000557496 XAF1Q6GPH4 301 aa-0.24□□□□□ -2.45
FOXN3-216ENST00000557496 EIF5AL1Q6IS14 154 aaKnown RBP-0.24□□□□□ -2.45
FOXN3-216ENST00000557496 GOLT1AQ6ZVE7 132 aa-0.24□□□□□ -2.45
FOXN3-216ENST00000557496 VMO1Q7Z5L0 202 aa-0.24□□□□□ -2.45
FOXN3-216ENST00000557496 TRAPPC5Q8IUR0 188 aa-0.24□□□□□ -2.45
FOXN3-216ENST00000557496 OR10AG1Q8NH19 301 aa-0.24□□□□□ -2.45
FOXN3-216ENST00000557496 OR4K15Q8NH41 348 aa-0.24□□□□□ -2.45
FOXN3-216ENST00000557496 CANT1Q8WVQ1 401 aa-0.24□□□□□ -2.45
FOXN3-216ENST00000557496 BORCS7Q96B45 105 aa-0.24□□□□□ -2.45
FOXN3-216ENST00000557496 DGCR14Q96DF8 476 aaKnown RBP-0.24□□□□□ -2.45
FOXN3-216ENST00000557496 CCDC42Q96M95 316 aa-0.24□□□□□ -2.45
Retrieved 100 of 20,778 RNA–protein pairs in 111.3 ms