RNA–Protein interactions for RNA: ENST00000544891.6

NECAP1-207, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 4,899 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-207ENST00000544891 TRAV8-2A0A0B4J237 113 aa7.27□□□□□ -1.25
NECAP1-207ENST00000544891 LY6G6EA0A0G2JKS1 128 aa7.27□□□□□ -1.25
NECAP1-207ENST00000544891 LYPD2Q6UXB3 125 aa7.27□□□□□ -1.25
NECAP1-207ENST00000544891 KLHL30-AS1Q8NEE0 82 aa7.27□□□□□ -1.25
NECAP1-207ENST00000544891 RNF138Q8WVD3 245 aa7.27□□□□□ -1.25
NECAP1-207ENST00000544891 JPT2Q9H910 190 aa7.27□□□□□ -1.25
NECAP1-207ENST00000544891 U3KQA8 63 aa7.27□□□□□ -1.25
NECAP1-207ENST00000544891 TRGV1A0A0A0MS02 117 aa7.26□□□□□ -1.25
NECAP1-207ENST00000544891 LINC00158P58513 81 aa7.26□□□□□ -1.25
NECAP1-207ENST00000544891 ERCC8Q13216 396 aa7.26□□□□□ -1.25
NECAP1-207ENST00000544891 DNAJC30Q96LL9 226 aa7.26□□□□□ -1.25
NECAP1-207ENST00000544891 IGKV1-6A0A0C4DH72 117 aa7.26□□□□□ -1.25
NECAP1-207ENST00000544891 SNAI2O43623 268 aa7.26□□□□□ -1.25
NECAP1-207ENST00000544891 ELANEP08246 267 aa7.26□□□□□ -1.25
NECAP1-207ENST00000544891 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.26□□□□□ -1.259e-7■■■■■ 30.3
NECAP1-207ENST00000544891 IGLV3-1P01715 115 aa7.26□□□□□ -1.25
NECAP1-207ENST00000544891 CD300EQ496F6 205 aaPredicted RBP7.26□□□□□ -1.25
NECAP1-207ENST00000544891 PIP4P1Q86T03 277 aa7.26□□□□□ -1.25
NECAP1-207ENST00000544891 TMEM141Q96I45 108 aa7.26□□□□□ -1.25
NECAP1-207ENST00000544891 PROK2Q9HC23 129 aa7.26□□□□□ -1.25
NECAP1-207ENST00000544891 A0A0G2JRQ6 117 aa7.26□□□□□ -1.25
NECAP1-207ENST00000544891 PRSS46E5RG02 174 aa7.26□□□□□ -1.25
NECAP1-207ENST00000544891 SYS1-DBNDD2H3BUS1 97 aa7.26□□□□□ -1.25
NECAP1-207ENST00000544891 FCN3O75636 299 aa7.26□□□□□ -1.25
NECAP1-207ENST00000544891 EVI2AP22794 236 aa7.26□□□□□ -1.25
NECAP1-207ENST00000544891 NSUN5P1Q3KNT7 163 aa7.26□□□□□ -1.25
NECAP1-207ENST00000544891 GAGE13Q4V321 117 aa7.26□□□□□ -1.25
NECAP1-207ENST00000544891 DMRTA1Q5VZB9 504 aa7.26□□□□□ -1.25
NECAP1-207ENST00000544891 LINC00527Q9UJ94 153 aa7.26□□□□□ -1.25
NECAP1-207ENST00000544891 IGKV1-16P04430 117 aa7.25□□□□□ -1.25
NECAP1-207ENST00000544891 LOXP28300 417 aaPredicted RBP7.25□□□□□ -1.25
NECAP1-207ENST00000544891 SS18Q15532 418 aa7.25□□□□□ -1.25
NECAP1-207ENST00000544891 LCNL1Q6ZST4 164 aa7.25□□□□□ -1.25
NECAP1-207ENST00000544891 SAMD5Q5TGI4 173 aa7.25□□□□□ -1.25
NECAP1-207ENST00000544891 BRD3OSQ6XYD6 125 aa7.25□□□□□ -1.25
NECAP1-207ENST00000544891 BCL6BQ8N143 479 aaPredicted RBP7.25□□□□□ -1.25
NECAP1-207ENST00000544891 TRBV19A0A075B6N1 114 aa7.25□□□□□ -1.25
NECAP1-207ENST00000544891 TRAV12-3A0A0B4J271 114 aa7.25□□□□□ -1.25
NECAP1-207ENST00000544891 PFN1P07737 140 aaKnown RBP7.25□□□□□ -1.25
NECAP1-207ENST00000544891 LGALS1P09382 135 aaKnown RBP7.25□□□□□ -1.25
NECAP1-207ENST00000544891 SPANXDQ9BXN6 97 aa7.25□□□□□ -1.25
NECAP1-207ENST00000544891 CSTL1Q9H114 145 aa7.25□□□□□ -1.25
NECAP1-207ENST00000544891 LENEPQ9Y5L5 61 aa7.24□□□□□ -1.25
NECAP1-207ENST00000544891 OVOL3O00110 214 aa7.24□□□□□ -1.25
NECAP1-207ENST00000544891 SP5Q6BEB4 398 aaPredicted RBP7.24□□□□□ -1.25
NECAP1-207ENST00000544891 C11orf52Q96A22 123 aa7.24□□□□□ -1.25
NECAP1-207ENST00000544891 KIAA2026Q5HYC2 2103 aa7.24□□□□□ -1.25
NECAP1-207ENST00000544891 CADP27708 2225 aa7.24□□□□□ -1.25
NECAP1-207ENST00000544891 USF3Q68DE3 2245 aa7.24□□□□□ -1.25
NECAP1-207ENST00000544891 LINC01619G3V211 115 aa7.24□□□□□ -1.25
NECAP1-207ENST00000544891 ARMS2P0C7Q2 107 aa7.24□□□□□ -1.25
NECAP1-207ENST00000544891 ADAMTS9Q9P2N4 1935 aa7.24□□□□□ -1.25
NECAP1-207ENST00000544891 C3orf79P0CE67 100 aa7.24□□□□□ -1.25
NECAP1-207ENST00000544891 PRB3Q04118 309 aaPredicted RBP7.24□□□□□ -1.25
NECAP1-207ENST00000544891 C6orf226Q5I0X4 101 aa7.24□□□□□ -1.25
NECAP1-207ENST00000544891 HTTP42858 3142 aa7.23□□□□□ -1.25
NECAP1-207ENST00000544891 K7EM74 188 aa7.23□□□□□ -1.25
NECAP1-207ENST00000544891 Q6ZR03 302 aa7.23□□□□□ -1.25
NECAP1-207ENST00000544891 HAPLN4Q86UW8 402 aa7.23□□□□□ -1.25
NECAP1-207ENST00000544891 THAP8Q8NA92 274 aa7.23□□□□□ -1.25
NECAP1-207ENST00000544891 MRPL53Q96EL3 112 aaKnown RBP7.23□□□□□ -1.25
NECAP1-207ENST00000544891 TDGF1P3P51864 188 aa7.23□□□□□ -1.25
NECAP1-207ENST00000544891 LEPROTO15243 131 aa7.23□□□□□ -1.25
NECAP1-207ENST00000544891 ATP6V0E1O15342 81 aa7.23□□□□□ -1.25
NECAP1-207ENST00000544891 C17orf58Q2M2W7 97 aa7.23□□□□□ -1.25
NECAP1-207ENST00000544891 GFI1BQ5VTD9 330 aa7.23□□□□□ -1.25
NECAP1-207ENST00000544891 TMEM158Q8WZ71 300 aa7.23□□□□□ -1.25
NECAP1-207ENST00000544891 DLX4Q92988 240 aaPredicted RBP7.23□□□□□ -1.25
NECAP1-207ENST00000544891 CST9LQ9H4G1 147 aa7.23□□□□□ -1.25
NECAP1-207ENST00000544891 TRAV8-4A0A0B4J246 113 aa7.23□□□□□ -1.25
NECAP1-207ENST00000544891 K7EMI3 77 aa7.23□□□□□ -1.25
NECAP1-207ENST00000544891 PAX4O43316 350 aa7.23□□□□□ -1.25
NECAP1-207ENST00000544891 CD5LO43866 347 aa7.23□□□□□ -1.25
NECAP1-207ENST00000544891 NCR2O95944 276 aa7.23□□□□□ -1.25
NECAP1-207ENST00000544891 ZC2HC1BQ5TFG8 222 aa7.23□□□□□ -1.25
NECAP1-207ENST00000544891 FAM104BQ5XKR9 115 aa7.23□□□□□ -1.25
NECAP1-207ENST00000544891 IGFL2Q6UWQ7 119 aa7.23□□□□□ -1.25
NECAP1-207ENST00000544891 BOD1L2Q8IYS8 172 aa7.23□□□□□ -1.25
NECAP1-207ENST00000544891 C14orf178Q8N769 122 aaPredicted RBP7.23□□□□□ -1.25
NECAP1-207ENST00000544891 TIMM21Q9BVV7 248 aa7.23□□□□□ -1.25
NECAP1-207ENST00000544891 C11orf68Q9H3H3 251 aaKnown RBP7.23□□□□□ -1.25
NECAP1-207ENST00000544891 LSM4Q9Y4Z0 139 aaKnown RBP7.23□□□□□ -1.25
NECAP1-207ENST00000544891 ZNF407Q9C0G0 2248 aa7.22□□□□□ -1.25
NECAP1-207ENST00000544891 C15orf65H3BRN8 121 aa7.22□□□□□ -1.25
NECAP1-207ENST00000544891 RNF144BQ7Z419 303 aa7.22□□□□□ -1.25
NECAP1-207ENST00000544891 UBE2DNLQ8IWF7 75 aa7.22□□□□□ -1.25
NECAP1-207ENST00000544891 PCDH15Q96QU1 1955 aa7.22□□□□□ -1.25
NECAP1-207ENST00000544891 TNFRSF6BO95407 300 aa7.22□□□□□ -1.25
NECAP1-207ENST00000544891 DEFB131AP59861 70 aa7.22□□□□□ -1.25
NECAP1-207ENST00000544891 GUSBP1Q15486 140 aa7.22□□□□□ -1.25
NECAP1-207ENST00000544891 Q8N8P6 123 aa7.22□□□□□ -1.25
NECAP1-207ENST00000544891 C20orf144Q9BQM9 153 aa7.22□□□□□ -1.25
NECAP1-207ENST00000544891 EML5Q05BV3 1969 aa7.22□□□□□ -1.25
NECAP1-207ENST00000544891 A4D1N5 150 aa7.22□□□□□ -1.25
NECAP1-207ENST00000544891 Q8TAT8 98 aa7.22□□□□□ -1.25
NECAP1-207ENST00000544891 SIGMAR1Q99720 223 aa7.22□□□□□ -1.25
NECAP1-207ENST00000544891 MPDZO75970 2070 aa7.22□□□□□ -1.25
NECAP1-207ENST00000544891 H3BRN7 92 aa7.22□□□□□ -1.25
NECAP1-207ENST00000544891 DLEU1O43261 78 aa7.22□□□□□ -1.25
NECAP1-207ENST00000544891 PAX9P55771 341 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms