RNA–Protein interactions for RNA: ENST00000540013.5

MRE11-209, Transcript of MRE11 homolog, double strand break repair nuclease, humanhuman

TSL 1 (best) BASIC

Gene MRE11, Length 1,212 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11-209ENST00000540013 ADAT3Q96EY9 351 aaPredicted RBP4.12□□□□□ -1.75
MRE11-209ENST00000540013 PHYHIPLQ96FC7 376 aa4.12□□□□□ -1.75
MRE11-209ENST00000540013 ERMAPQ96PL5 475 aaPredicted RBP4.12□□□□□ -1.75
MRE11-209ENST00000540013 VGLL1Q99990 258 aa4.12□□□□□ -1.75
MRE11-209ENST00000540013 SOSTQ9BQB4 213 aa4.12□□□□□ -1.75
MRE11-209ENST00000540013 HDHD3Q9BSH5 251 aaPredicted RBP4.12□□□□□ -1.75
MRE11-209ENST00000540013 CHCHD7Q9BUK0 85 aa4.12□□□□□ -1.75
MRE11-209ENST00000540013 REG4Q9BYZ8 158 aa4.12□□□□□ -1.75
MRE11-209ENST00000540013 HMG20AQ9NP66 347 aa4.12□□□□□ -1.75
MRE11-209ENST00000540013 LAMTOR3Q9UHA4 124 aa4.12□□□□□ -1.75
MRE11-209ENST00000540013 CYSLTR1Q9Y271 337 aa4.12□□□□□ -1.75
MRE11-209ENST00000540013 MRPS16Q9Y3D3 137 aaKnown RBP4.12□□□□□ -1.75
MRE11-209ENST00000540013 IGHV1-18A0A0C4DH31 117 aa4.11□□□□□ -1.75
MRE11-209ENST00000540013 LOC102725191A0A1B0GVB3 256 aa4.11□□□□□ -1.75
MRE11-209ENST00000540013 ATP6V1G2-DDX39BF2Z307 99 aa4.11□□□□□ -1.75
MRE11-209ENST00000540013 RPL36A-HNRNPH2H7BZ11 118 aa4.11□□□□□ -1.75
MRE11-209ENST00000540013 COX7A2LO14548 114 aa4.11□□□□□ -1.75
MRE11-209ENST00000540013 CYB5BO43169 146 aa4.11□□□□□ -1.75
MRE11-209ENST00000540013 RPL7P18124 248 aaKnown RBP4.11□□□□□ -1.75
MRE11-209ENST00000540013 S100A2P29034 98 aa4.11□□□□□ -1.75
MRE11-209ENST00000540013 ZNF616Q08AN1 781 aa4.11□□□□□ -1.75
MRE11-209ENST00000540013 ENDOGQ14249 297 aaKnown RBP4.11□□□□□ -1.75
MRE11-209ENST00000540013 TMEM256Q8N2U0 113 aa4.11□□□□□ -1.75
MRE11-209ENST00000540013 WFDC6Q9BQY6 131 aa4.11□□□□□ -1.75
MRE11-209ENST00000540013 VCXQ9H320 206 aa4.11□□□□□ -1.75
MRE11-209ENST00000540013 TMEM38BQ9NVV0 291 aa4.11□□□□□ -1.75
MRE11-209ENST00000540013 COL6A5A8TX70 2615 aa4.11□□□□□ -1.75
MRE11-209ENST00000540013 ANK3Q12955 4377 aaKnown RBP4.11□□□□□ -1.75
MRE11-209ENST00000540013 IGHV3OR15-7A0A075B7D8 119 aa4.1□□□□□ -1.75
MRE11-209ENST00000540013 IGHV3-49A0A0A0MS15 119 aa4.1□□□□□ -1.75
MRE11-209ENST00000540013 CPSF4LA6NMK7 179 aaKnown RBP4.1□□□□□ -1.75
MRE11-209ENST00000540013 BBIP1A8MTZ0 92 aa4.1□□□□□ -1.75
MRE11-209ENST00000540013 IGKV3-15P01624 115 aa4.1□□□□□ -1.75
MRE11-209ENST00000540013 APCSP02743 223 aa4.1□□□□□ -1.75
MRE11-209ENST00000540013 SMIM17P0DL12 118 aa4.1□□□□□ -1.75
MRE11-209ENST00000540013 SLC25A16P16260 332 aa4.1□□□□□ -1.75
MRE11-209ENST00000540013 OPRK1P41145 380 aa4.1□□□□□ -1.75
MRE11-209ENST00000540013 DEFA3P59666 94 aa4.1□□□□□ -1.75
MRE11-209ENST00000540013 FGF12P61328 243 aa4.1□□□□□ -1.75
MRE11-209ENST00000540013 PSG9Q00887 426 aa4.1□□□□□ -1.75
MRE11-209ENST00000540013 DHRS2Q13268 280 aa4.1□□□□□ -1.75
MRE11-209ENST00000540013 C15orf56Q8N910 161 aa4.1□□□□□ -1.75
MRE11-209ENST00000540013 OR4K15Q8NH41 348 aa4.1□□□□□ -1.75
MRE11-209ENST00000540013 MRPL30Q8TCC3 161 aaKnown RBP4.1□□□□□ -1.75
MRE11-209ENST00000540013 CANT1Q8WVQ1 401 aa4.1□□□□□ -1.75
MRE11-209ENST00000540013 IMUPQ9GZP8 106 aa4.1□□□□□ -1.75
MRE11-209ENST00000540013 WDR61Q9GZS3 305 aaKnown RBP4.1□□□□□ -1.75
MRE11-209ENST00000540013 ARHGAP32A7KAX9 2087 aa4.1□□□□□ -1.75
MRE11-209ENST00000540013 TRBV20OR9-2A0A075B6H5 130 aa4.09□□□□□ -1.75
MRE11-209ENST00000540013 A0A096LNT2 108 aa4.09□□□□□ -1.75
MRE11-209ENST00000540013 IGKV3D-20A0A0C4DH25 116 aa4.09□□□□□ -1.75
MRE11-209ENST00000540013 CLDN25C9JDP6 229 aa4.09□□□□□ -1.75
MRE11-209ENST00000540013 FXYD1O00168 92 aa4.09□□□□□ -1.75
MRE11-209ENST00000540013 ADRA2AP08913 450 aa4.09□□□□□ -1.75
MRE11-209ENST00000540013 CD7P09564 240 aa4.09□□□□□ -1.75
MRE11-209ENST00000540013 UBBP0CG47 229 aa4.09□□□□□ -1.75
MRE11-209ENST00000540013 ZNF823P16415 610 aa4.09□□□□□ -1.75
MRE11-209ENST00000540013 EFNA4P52798 201 aa4.09□□□□□ -1.75
MRE11-209ENST00000540013 Q8N7P7 452 aa4.09□□□□□ -1.75
MRE11-209ENST00000540013 RHOXF1Q8NHV9 184 aa4.09□□□□□ -1.75
MRE11-209ENST00000540013 C10orf105Q8TEF2 133 aa4.09□□□□□ -1.75
MRE11-209ENST00000540013 RAB2BQ8WUD1 216 aa4.09□□□□□ -1.75
MRE11-209ENST00000540013 ACOT12Q8WYK0 555 aa4.09□□□□□ -1.75
MRE11-209ENST00000540013 CMBLQ96DG6 245 aa4.09□□□□□ -1.75
MRE11-209ENST00000540013 RMI2Q96E14 147 aa4.09□□□□□ -1.75
MRE11-209ENST00000540013 C11orf68Q9H3H3 251 aaKnown RBP4.09□□□□□ -1.75
MRE11-209ENST00000540013 ZNF286AQ9HBT8 521 aa4.09□□□□□ -1.75
MRE11-209ENST00000540013 SAR1AQ9NR31 198 aa4.09□□□□□ -1.75
MRE11-209ENST00000540013 RPUSD1Q9UJJ7 312 aaKnown RBP4.09□□□□□ -1.75
MRE11-209ENST00000540013 AMMECR1Q9Y4X0 333 aaPredicted RBP4.09□□□□□ -1.75
MRE11-209ENST00000540013 TRAV9-1A0A075B6T8 112 aa4.08□□□□□ -1.76
MRE11-209ENST00000540013 DUXBA0A1W2PPF3 345 aa4.08□□□□□ -1.76
MRE11-209ENST00000540013 LINC00862A6NCI5 91 aa4.08□□□□□ -1.76
MRE11-209ENST00000540013 J3QRK9 145 aa4.08□□□□□ -1.76
MRE11-209ENST00000540013 LY6HO94772 140 aa4.08□□□□□ -1.76
MRE11-209ENST00000540013 UBL3O95164 117 aa4.08□□□□□ -1.76
MRE11-209ENST00000540013 ASAH2BP0C7U1 165 aa4.08□□□□□ -1.76
MRE11-209ENST00000540013 CMC4P56277 68 aaPredicted RBP4.08□□□□□ -1.76
MRE11-209ENST00000540013 DEFA6Q01524 100 aa4.08□□□□□ -1.76
MRE11-209ENST00000540013 MORN2Q502X0 79 aa4.08□□□□□ -1.76
MRE11-209ENST00000540013 LUZP6Q538Z0 58 aa4.08□□□□□ -1.76
MRE11-209ENST00000540013 PRSS54Q6PEW0 395 aa4.08□□□□□ -1.76
MRE11-209ENST00000540013 ARPINQ7Z6K5 226 aa4.08□□□□□ -1.76
MRE11-209ENST00000540013 WDR86Q86TI4 376 aa4.08□□□□□ -1.76
MRE11-209ENST00000540013 PCP2Q8IVA1 136 aa4.08□□□□□ -1.76
MRE11-209ENST00000540013 LYG1Q8N1E2 194 aa4.08□□□□□ -1.76
MRE11-209ENST00000540013 FER1L6-AS1Q8NA97 138 aa4.08□□□□□ -1.76
MRE11-209ENST00000540013 OR4A5Q8NH83 315 aa4.08□□□□□ -1.76
MRE11-209ENST00000540013 C10orf82Q8WW14 230 aa4.08□□□□□ -1.76
MRE11-209ENST00000540013 TMEM158Q8WZ71 300 aa4.08□□□□□ -1.76
MRE11-209ENST00000540013 C2orf50Q96LR7 162 aa4.08□□□□□ -1.76
MRE11-209ENST00000540013 SPIN2AQ99865 258 aa4.08□□□□□ -1.76
MRE11-209ENST00000540013 SPIN2BQ9BPZ2 258 aa4.08□□□□□ -1.76
MRE11-209ENST00000540013 TET2Q6N021 2002 aaPredicted RBP4.07□□□□□ -1.76
MRE11-209ENST00000540013 TANC2Q9HCD6 1990 aa4.07□□□□□ -1.76
MRE11-209ENST00000540013 DNHD1Q96M86 4753 aa4.07□□□□□ -1.76
MRE11-209ENST00000540013 STAB1Q9NY15 2570 aa4.07□□□□□ -1.76
MRE11-209ENST00000540013 IGHV3-43A0A0B4J1X8 118 aa4.07□□□□□ -1.76
MRE11-209ENST00000540013 CCDC160A6NGH7 325 aa4.07□□□□□ -1.76
MRE11-209ENST00000540013 OR5H14A6NHG9 310 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms