RNA–Protein interactions for RNA: ENST00000538266.5

SNHG1-208, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 347 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-208ENST00000538266 HIST2H2BDQ6DRA6 164 aa3.31□□□□□ -1.88
SNHG1-208ENST00000538266 LCN15Q6UWW0 184 aa3.31□□□□□ -1.88
SNHG1-208ENST00000538266 C19orf35Q6ZS72 473 aa3.31□□□□□ -1.88
SNHG1-208ENST00000538266 MRPL52Q86TS9 123 aaKnown RBP3.31□□□□□ -1.88
SNHG1-208ENST00000538266 OR4X1Q8NH49 305 aa3.31□□□□□ -1.88
SNHG1-208ENST00000538266 MYOZ3Q8TDC0 251 aa3.31□□□□□ -1.88
SNHG1-208ENST00000538266 VN1R17PQ8TDU5 208 aa3.31□□□□□ -1.88
SNHG1-208ENST00000538266 TMEM170AQ8WVE7 144 aa3.31□□□□□ -1.88
SNHG1-208ENST00000538266 RNF183Q96D59 192 aa3.31□□□□□ -1.88
SNHG1-208ENST00000538266 PYGO2Q9BRQ0 406 aa3.31□□□□□ -1.88
SNHG1-208ENST00000538266 RSG1Q9BU20 258 aa3.31□□□□□ -1.88
SNHG1-208ENST00000538266 TMEM147Q9BVK8 224 aa3.31□□□□□ -1.88
SNHG1-208ENST00000538266 ACTR3CQ9C0K3 210 aaPredicted RBP3.31□□□□□ -1.88
SNHG1-208ENST00000538266 WDR61Q9GZS3 305 aaKnown RBP3.31□□□□□ -1.88
SNHG1-208ENST00000538266 GNB4Q9HAV0 340 aa3.31□□□□□ -1.88
SNHG1-208ENST00000538266 RPRMQ9NS64 109 aa3.31□□□□□ -1.88
SNHG1-208ENST00000538266 C21orf62Q9NYP8 219 aa3.31□□□□□ -1.88
SNHG1-208ENST00000538266 PSENENQ9NZ42 101 aa3.31□□□□□ -1.88
SNHG1-208ENST00000538266 S4R3C0 116 aa3.31□□□□□ -1.88
SNHG1-208ENST00000538266 ATRQ13535 2644 aa3.3□□□□□ -1.88
SNHG1-208ENST00000538266 IGHV3-21A0A0B4J1V1 117 aa3.3□□□□□ -1.88
SNHG1-208ENST00000538266 GAGE10A6NGK3 116 aa3.3□□□□□ -1.88
SNHG1-208ENST00000538266 OR2T8A6NH00 312 aa3.3□□□□□ -1.88
SNHG1-208ENST00000538266 A8MWP6 167 aa3.3□□□□□ -1.88
SNHG1-208ENST00000538266 F6UZH7 168 aa3.3□□□□□ -1.88
SNHG1-208ENST00000538266 LINC01619G3V211 115 aa3.3□□□□□ -1.88
SNHG1-208ENST00000538266 K7EIM0 57 aa3.3□□□□□ -1.88
SNHG1-208ENST00000538266 GGCTO75223 188 aaKnown RBP3.3□□□□□ -1.88
SNHG1-208ENST00000538266 IGHV3-48P01763 117 aa3.3□□□□□ -1.88
SNHG1-208ENST00000538266 IGHV3-23P01764 117 aa3.3□□□□□ -1.88
SNHG1-208ENST00000538266 TYMSP04818 313 aa3.3□□□□□ -1.88
SNHG1-208ENST00000538266 PFN1P07737 140 aaKnown RBP3.3□□□□□ -1.88
SNHG1-208ENST00000538266 GZMBP10144 247 aa3.3□□□□□ -1.88
SNHG1-208ENST00000538266 RAB4AP20338 218 aa3.3□□□□□ -1.88
SNHG1-208ENST00000538266 GPR183P32249 361 aa3.3□□□□□ -1.88
SNHG1-208ENST00000538266 ARL3P36405 182 aa3.3□□□□□ -1.88
SNHG1-208ENST00000538266 MFAP2P55001 183 aa3.3□□□□□ -1.88
SNHG1-208ENST00000538266 FGF8P55075 233 aaPredicted RBP3.3□□□□□ -1.88
SNHG1-208ENST00000538266 MFAP4P55083 255 aa3.3□□□□□ -1.88
SNHG1-208ENST00000538266 KRTAP10-11P60412 298 aa3.3□□□□□ -1.88
SNHG1-208ENST00000538266 USF2Q15853 346 aaPredicted RBP3.3□□□□□ -1.88
SNHG1-208ENST00000538266 ZNF726P1Q15940 193 aa3.3□□□□□ -1.88
SNHG1-208ENST00000538266 ATP6V1FQ16864 119 aa3.3□□□□□ -1.88
SNHG1-208ENST00000538266 RPEL1Q2QD12 228 aa3.3□□□□□ -1.88
SNHG1-208ENST00000538266 OR8G2PQ6IF36 304 aa3.3□□□□□ -1.88
SNHG1-208ENST00000538266 CLEC19AQ6UXS0 136 aa3.3□□□□□ -1.88
SNHG1-208ENST00000538266 C18orf65Q6ZTR6 163 aa3.3□□□□□ -1.88
SNHG1-208ENST00000538266 SSX7Q7RTT5 188 aa3.3□□□□□ -1.88
SNHG1-208ENST00000538266 PRR26Q8N8Z3 221 aa3.3□□□□□ -1.88
SNHG1-208ENST00000538266 OR11H1Q8NG94 326 aa3.3□□□□□ -1.88
SNHG1-208ENST00000538266 OR10P1Q8NGE3 313 aa3.3□□□□□ -1.88
SNHG1-208ENST00000538266 OR1N2Q8NGR9 330 aa3.3□□□□□ -1.88
SNHG1-208ENST00000538266 ZNF502Q8TBZ5 544 aa3.3□□□□□ -1.88
SNHG1-208ENST00000538266 RPUSD4Q96CM3 377 aaKnown RBP3.3□□□□□ -1.88
SNHG1-208ENST00000538266 RNF125Q96EQ8 232 aa3.3□□□□□ -1.88
SNHG1-208ENST00000538266 SLC35E1Q96K37 410 aa3.3□□□□□ -1.88
SNHG1-208ENST00000538266 TXN2Q99757 166 aa3.3□□□□□ -1.88
SNHG1-208ENST00000538266 SLC25A22Q9H936 323 aa3.3□□□□□ -1.88
SNHG1-208ENST00000538266 SLC39A9Q9NUM3 307 aa3.3□□□□□ -1.88
SNHG1-208ENST00000538266 PPP1R14DQ9NXH3 145 aa3.3□□□□□ -1.88
SNHG1-208ENST00000538266 PEF1Q9UBV8 284 aaKnown RBP3.3□□□□□ -1.88
SNHG1-208ENST00000538266 NIPBLQ6KC79 2804 aaeCLIP3.3□□□□□ -1.888e-27■■■■□ 21.5
SNHG1-208ENST00000538266 NF1P21359 2839 aa3.29□□□□□ -1.88
SNHG1-208ENST00000538266 TRAV9-1A0A075B6T8 112 aa3.29□□□□□ -1.88
SNHG1-208ENST00000538266 IGHV4OR15-8A0A075B7B6 117 aa3.29□□□□□ -1.88
SNHG1-208ENST00000538266 TRAV30A0A087WSZ9 112 aa3.29□□□□□ -1.88
SNHG1-208ENST00000538266 A0A087WW49 117 aa3.29□□□□□ -1.88
SNHG1-208ENST00000538266 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP3.29□□□□□ -1.88
SNHG1-208ENST00000538266 KIR2DL5BA0A0G2JN68 375 aa3.29□□□□□ -1.88
SNHG1-208ENST00000538266 KIR2DL5BA0A0G2JPC4 375 aa3.29□□□□□ -1.88
SNHG1-208ENST00000538266 A0A1W2PPQ1 181 aa3.29□□□□□ -1.88
SNHG1-208ENST00000538266 ZNF320A2RRD8 509 aa3.29□□□□□ -1.88
SNHG1-208ENST00000538266 C15orf62A8K5M9 175 aa3.29□□□□□ -1.88
SNHG1-208ENST00000538266 ZNF705GA8MUZ8 300 aaPredicted RBP3.29□□□□□ -1.88
SNHG1-208ENST00000538266 C17orf112F2Z3M2 114 aa3.29□□□□□ -1.88
SNHG1-208ENST00000538266 I3L2K1 104 aa3.29□□□□□ -1.88
SNHG1-208ENST00000538266 BMPR1BO00238 502 aa3.29□□□□□ -1.88
SNHG1-208ENST00000538266 TCAPO15273 167 aa3.29□□□□□ -1.88
SNHG1-208ENST00000538266 PDE6DO43924 150 aa3.29□□□□□ -1.88
SNHG1-208ENST00000538266 TRBV12-3P01733 135 aa3.29□□□□□ -1.88
SNHG1-208ENST00000538266 CLEC3BP05452 202 aa3.29□□□□□ -1.88
SNHG1-208ENST00000538266 MYCNOSP40205 109 aa3.29□□□□□ -1.88
SNHG1-208ENST00000538266 NUTF2P61970 127 aaKnown RBP3.29□□□□□ -1.88
SNHG1-208ENST00000538266 RPL23P62829 140 aaKnown RBP3.29□□□□□ -1.88
SNHG1-208ENST00000538266 RELQ04864 619 aaPredicted RBP3.29□□□□□ -1.88
SNHG1-208ENST00000538266 KLK9Q2XQG4 91 aa3.29□□□□□ -1.88
SNHG1-208ENST00000538266 FAM106AQ4KMX7 169 aa3.29□□□□□ -1.88
SNHG1-208ENST00000538266 FFAR4Q5NUL3 377 aa3.29□□□□□ -1.88
SNHG1-208ENST00000538266 SERTAD4-AS1Q5TG53 156 aa3.29□□□□□ -1.88
SNHG1-208ENST00000538266 TMEM14EPQ6UXP3 125 aa3.29□□□□□ -1.88
SNHG1-208ENST00000538266 HAPLN4Q86UW8 402 aa3.29□□□□□ -1.88
SNHG1-208ENST00000538266 KIR2DL5AQ8N109 375 aa3.29□□□□□ -1.88
SNHG1-208ENST00000538266 ZNF709Q8N972 641 aa3.29□□□□□ -1.88
SNHG1-208ENST00000538266 OR51G1Q8NGK1 321 aa3.29□□□□□ -1.88
SNHG1-208ENST00000538266 CACNG8Q8WXS5 425 aa3.29□□□□□ -1.88
SNHG1-208ENST00000538266 DUX3Q96PT4 197 aa3.29□□□□□ -1.88
SNHG1-208ENST00000538266 OR4C12Q96R67 309 aa3.29□□□□□ -1.88
SNHG1-208ENST00000538266 IMMP2LQ96T52 175 aa3.29□□□□□ -1.88
SNHG1-208ENST00000538266 ATP6V0BQ99437 205 aa3.29□□□□□ -1.88
SNHG1-208ENST00000538266 MCRIP2Q9BUT9 160 aaKnown RBP3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms