RNA–Protein interactions for RNA: ENST00000510099.5

PDLIM5-214, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-214ENST00000510099 TMEM256Q8N2U0 113 aa3.68□□□□□ -1.82
PDLIM5-214ENST00000510099 CIARTQ8N365 385 aaPredicted RBP3.68□□□□□ -1.82
PDLIM5-214ENST00000510099 LINC01356Q8N9X3 169 aa3.68□□□□□ -1.82
PDLIM5-214ENST00000510099 GTSF1Q8WW33 167 aa3.68□□□□□ -1.82
PDLIM5-214ENST00000510099 ZC2HC1AQ96GY0 325 aa3.68□□□□□ -1.82
PDLIM5-214ENST00000510099 NOL4LQ96MY1 436 aaPredicted RBP3.68□□□□□ -1.82
PDLIM5-214ENST00000510099 KRTAP4-2Q9BYR5 136 aa3.68□□□□□ -1.82
PDLIM5-214ENST00000510099 AAMDCQ9H7C9 122 aa3.68□□□□□ -1.82
PDLIM5-214ENST00000510099 GNB4Q9HAV0 340 aa3.68□□□□□ -1.82
PDLIM5-214ENST00000510099 ZNF331Q9NQX6 463 aaPredicted RBP3.68□□□□□ -1.82
PDLIM5-214ENST00000510099 GSN-AS1Q9NRJ2 163 aa3.68□□□□□ -1.82
PDLIM5-214ENST00000510099 BEX4Q9NWD9 120 aaPredicted RBP3.68□□□□□ -1.82
PDLIM5-214ENST00000510099 PSG8Q9UQ74 426 aa3.68□□□□□ -1.82
PDLIM5-214ENST00000510099 SMAD5-AS1Q9Y6J3 95 aa3.68□□□□□ -1.82
PDLIM5-214ENST00000510099 U3KQE9 123 aa3.68□□□□□ -1.82
PDLIM5-214ENST00000510099 UBR5O95071 2799 aaPredicted RBP3.68□□□□□ -1.82
PDLIM5-214ENST00000510099 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP3.67□□□□□ -1.824e-6■□□□□ 9.7
PDLIM5-214ENST00000510099 IGKV2-40A0A087WW87 121 aaPredicted RBP3.67□□□□□ -1.82
PDLIM5-214ENST00000510099 IGHV3-35A0A0C4DH35 117 aa3.67□□□□□ -1.82
PDLIM5-214ENST00000510099 A1L4Q6 167 aa3.67□□□□□ -1.82
PDLIM5-214ENST00000510099 F2Z2F3 143 aa3.67□□□□□ -1.82
PDLIM5-214ENST00000510099 CHEK1O14757 476 aa3.67□□□□□ -1.82
PDLIM5-214ENST00000510099 NUPR1O60356 82 aa3.67□□□□□ -1.82
PDLIM5-214ENST00000510099 SPINK4O60575 86 aa3.67□□□□□ -1.82
PDLIM5-214ENST00000510099 SERF1AO75920 110 aa3.67□□□□□ -1.82
PDLIM5-214ENST00000510099 IGKV2D-40P01614 121 aaPredicted RBP3.67□□□□□ -1.82
PDLIM5-214ENST00000510099 IGHG4P01861 327 aa3.67□□□□□ -1.82
PDLIM5-214ENST00000510099 APCSP02743 223 aa3.67□□□□□ -1.82
PDLIM5-214ENST00000510099 APOHP02749 345 aaPredicted RBP3.67□□□□□ -1.82
PDLIM5-214ENST00000510099 TRGV3P03979 118 aa3.67□□□□□ -1.82
PDLIM5-214ENST00000510099 GZMBP10144 247 aa3.67□□□□□ -1.82
PDLIM5-214ENST00000510099 PPIFP30405 207 aaKnown RBP3.67□□□□□ -1.82
PDLIM5-214ENST00000510099 SRIP30626 198 aa3.67□□□□□ -1.82
PDLIM5-214ENST00000510099 TPPP2P59282 170 aa3.67□□□□□ -1.82
PDLIM5-214ENST00000510099 RAB4BP61018 213 aa3.67□□□□□ -1.82
PDLIM5-214ENST00000510099 LOXL1Q08397 574 aaPredicted RBP3.67□□□□□ -1.82
PDLIM5-214ENST00000510099 KLF5Q13887 457 aaPredicted RBP3.67□□□□□ -1.82
PDLIM5-214ENST00000510099 LY6EQ16553 131 aa3.67□□□□□ -1.82
PDLIM5-214ENST00000510099 OR10J3Q5JRS4 329 aa3.67□□□□□ -1.82
PDLIM5-214ENST00000510099 RBPMS2Q6ZRY4 209 aaKnown RBP3.67□□□□□ -1.82
PDLIM5-214ENST00000510099 TCF24Q7RTU0 167 aa3.67□□□□□ -1.82
PDLIM5-214ENST00000510099 LRRC75A-AS1Q8N1F1 130 aa3.67□□□□□ -1.82
PDLIM5-214ENST00000510099 GATD1Q8NB37 220 aa3.67□□□□□ -1.82
PDLIM5-214ENST00000510099 OR2D3Q8NGH3 330 aa3.67□□□□□ -1.82
PDLIM5-214ENST00000510099 MRPL53Q96EL3 112 aaKnown RBP3.67□□□□□ -1.82
PDLIM5-214ENST00000510099 DAZAP1Q96EP5 407 aaKnown RBP3.67□□□□□ -1.82
PDLIM5-214ENST00000510099 USMG5Q96IX5 58 aa3.67□□□□□ -1.82
PDLIM5-214ENST00000510099 KCNS1Q96KK3 526 aa3.67□□□□□ -1.82
PDLIM5-214ENST00000510099 MS4A10Q96PG2 267 aa3.67□□□□□ -1.82
PDLIM5-214ENST00000510099 METTL26Q96S19 204 aa3.67□□□□□ -1.82
PDLIM5-214ENST00000510099 SLC50A1Q9BRV3 221 aa3.67□□□□□ -1.82
PDLIM5-214ENST00000510099 PRDM13Q9H4Q3 707 aa3.67□□□□□ -1.82
PDLIM5-214ENST00000510099 NAV2Q8IVL1 2488 aa3.67□□□□□ -1.82
PDLIM5-214ENST00000510099 IGHV3OR16-8A0A075B7F1 116 aa3.66□□□□□ -1.82
PDLIM5-214ENST00000510099 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP3.66□□□□□ -1.82
PDLIM5-214ENST00000510099 RBAKDNA6NC62 111 aa3.66□□□□□ -1.82
PDLIM5-214ENST00000510099 LINC00587B1AMM8 73 aa3.66□□□□□ -1.82
PDLIM5-214ENST00000510099 NDUFA4O00483 81 aa3.66□□□□□ -1.82
PDLIM5-214ENST00000510099 IGLV1-40P01703 118 aa3.66□□□□□ -1.82
PDLIM5-214ENST00000510099 CT45A10P0DMU9 189 aa3.66□□□□□ -1.82
PDLIM5-214ENST00000510099 IGHV4-31P0DP07 118 aa3.66□□□□□ -1.82
PDLIM5-214ENST00000510099 ARL3P36405 182 aa3.66□□□□□ -1.82
PDLIM5-214ENST00000510099 CRIP1P50238 77 aa3.66□□□□□ -1.82
PDLIM5-214ENST00000510099 FOXA3P55318 350 aaPredicted RBP3.66□□□□□ -1.82
PDLIM5-214ENST00000510099 PAFAH1B2P68402 229 aa3.66□□□□□ -1.82
PDLIM5-214ENST00000510099 KIAA1644Q3SXP7 199 aa3.66□□□□□ -1.82
PDLIM5-214ENST00000510099 C9orf152Q5JTZ5 239 aa3.66□□□□□ -1.82
PDLIM5-214ENST00000510099 Q6AWC8 147 aa3.66□□□□□ -1.82
PDLIM5-214ENST00000510099 C9orf139Q6ZV77 190 aa3.66□□□□□ -1.82
PDLIM5-214ENST00000510099 Q6ZWC4 215 aa3.66□□□□□ -1.82
PDLIM5-214ENST00000510099 BAGE3Q86Y29 109 aa3.66□□□□□ -1.82
PDLIM5-214ENST00000510099 C18orf32Q8TCD1 76 aa3.66□□□□□ -1.82
PDLIM5-214ENST00000510099 GLMPQ8WWB7 406 aa3.66□□□□□ -1.82
PDLIM5-214ENST00000510099 PGLYRP4Q96LB8 373 aa3.66□□□□□ -1.82
PDLIM5-214ENST00000510099 C8orf49Q96NF6 230 aa3.66□□□□□ -1.82
PDLIM5-214ENST00000510099 RCHY1Q96PM5 261 aa3.66□□□□□ -1.82
PDLIM5-214ENST00000510099 LINC00527Q9UJ94 153 aa3.66□□□□□ -1.82
PDLIM5-214ENST00000510099 USP9YO00507 2555 aaPredicted RBP3.66□□□□□ -1.82
PDLIM5-214ENST00000510099 FBN2P35556 2912 aa3.65□□□□□ -1.82
PDLIM5-214ENST00000510099 TRAV8-2A0A0B4J237 113 aa3.65□□□□□ -1.83
PDLIM5-214ENST00000510099 A0A1B0GUT8 65 aa3.65□□□□□ -1.83
PDLIM5-214ENST00000510099 A0A1B0GW15 77 aa3.65□□□□□ -1.83
PDLIM5-214ENST00000510099 SH2D1AO60880 128 aa3.65□□□□□ -1.83
PDLIM5-214ENST00000510099 ZNF324O75467 553 aaPredicted RBP3.65□□□□□ -1.83
PDLIM5-214ENST00000510099 TRBV12-3P01733 135 aa3.65□□□□□ -1.83
PDLIM5-214ENST00000510099 IGHV4-59P01825 116 aa3.65□□□□□ -1.83
PDLIM5-214ENST00000510099 HLA-DMBP28068 263 aa3.65□□□□□ -1.83
PDLIM5-214ENST00000510099 CTRLP40313 264 aa3.65□□□□□ -1.83
PDLIM5-214ENST00000510099 CAMPP49913 170 aa3.65□□□□□ -1.83
PDLIM5-214ENST00000510099 KRTAP10-9P60411 292 aa3.65□□□□□ -1.83
PDLIM5-214ENST00000510099 PKIAP61925 76 aa3.65□□□□□ -1.83
PDLIM5-214ENST00000510099 BLCAPP62952 87 aa3.65□□□□□ -1.83
PDLIM5-214ENST00000510099 SRSF2Q01130 221 aaKnown RBP3.65□□□□□ -1.83
PDLIM5-214ENST00000510099 IQCJQ1A5X6 159 aa3.65□□□□□ -1.83
PDLIM5-214ENST00000510099 DEFB113Q30KQ7 82 aa3.65□□□□□ -1.83
PDLIM5-214ENST00000510099 DEFB112Q30KQ8 113 aa3.65□□□□□ -1.83
PDLIM5-214ENST00000510099 FAM209BQ5JX69 171 aa3.65□□□□□ -1.83
PDLIM5-214ENST00000510099 Q5PR19 223 aa3.65□□□□□ -1.83
PDLIM5-214ENST00000510099 SAPCD1Q5SSQ6 148 aa3.65□□□□□ -1.83
PDLIM5-214ENST00000510099 FAM162BQ5T6X4 162 aa3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms