RNA–Protein interactions for RNA: ENST00000508466.1

LIMCH1-207, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 2

Gene LIMCH1, Length 3,051 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-207ENST00000508466 RITA1Q96K30 269 aa5.76□□□□□ -1.49
LIMCH1-207ENST00000508466 MLST8Q9BVC4 326 aa5.76□□□□□ -1.49
LIMCH1-207ENST00000508466 PRSS22Q9GZN4 317 aa5.76□□□□□ -1.49
LIMCH1-207ENST00000508466 KLK5Q9Y337 293 aaPredicted RBP5.76□□□□□ -1.49
LIMCH1-207ENST00000508466 COL5A1P20908 1838 aaPredicted RBP5.76□□□□□ -1.49
LIMCH1-207ENST00000508466 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.76□□□□□ -1.49
LIMCH1-207ENST00000508466 C19orf71A6NCJ1 209 aa5.76□□□□□ -1.49
LIMCH1-207ENST00000508466 GAGE12JA6NER3 117 aa5.76□□□□□ -1.49
LIMCH1-207ENST00000508466 EPOPA6NHQ4 379 aa5.76□□□□□ -1.49
LIMCH1-207ENST00000508466 LMO7DNF2Z398 122 aa5.76□□□□□ -1.49
LIMCH1-207ENST00000508466 C15orf65H3BRN8 121 aa5.76□□□□□ -1.49
LIMCH1-207ENST00000508466 HOXA3O43365 443 aaPredicted RBP5.76□□□□□ -1.49
LIMCH1-207ENST00000508466 GAGE7O76087 117 aa5.76□□□□□ -1.49
LIMCH1-207ENST00000508466 GAGE12FP0CL80 117 aa5.76□□□□□ -1.49
LIMCH1-207ENST00000508466 GAGE12GP0CL81 117 aa5.76□□□□□ -1.49
LIMCH1-207ENST00000508466 GAGE12IP0CL82 117 aa5.76□□□□□ -1.49
LIMCH1-207ENST00000508466 SAA1P0DJI8 122 aaPredicted RBP5.76□□□□□ -1.49
LIMCH1-207ENST00000508466 RNASE2P10153 161 aaKnown RBP5.76□□□□□ -1.49
LIMCH1-207ENST00000508466 WT1P19544 449 aaPredicted RBP5.76□□□□□ -1.49
LIMCH1-207ENST00000508466 CCL7P80098 99 aa5.76□□□□□ -1.49
LIMCH1-207ENST00000508466 WT1-ASQ06250 92 aa5.76□□□□□ -1.49
LIMCH1-207ENST00000508466 CD69Q07108 199 aa5.76□□□□□ -1.49
LIMCH1-207ENST00000508466 GAGE4Q13068 117 aa5.76□□□□□ -1.49
LIMCH1-207ENST00000508466 LGALS9BQ3B8N2 356 aa5.76□□□□□ -1.49
LIMCH1-207ENST00000508466 LGALS9CQ6DKI2 356 aa5.76□□□□□ -1.49
LIMCH1-207ENST00000508466 MORN3Q6PF18 240 aaPredicted RBP5.76□□□□□ -1.49
LIMCH1-207ENST00000508466 TMEM158Q8WZ71 300 aa5.76□□□□□ -1.49
LIMCH1-207ENST00000508466 VKORC1Q9BQB6 163 aa5.76□□□□□ -1.49
LIMCH1-207ENST00000508466 CALYQ9NYX4 217 aa5.76□□□□□ -1.49
LIMCH1-207ENST00000508466 PRNDQ9UKY0 176 aa5.76□□□□□ -1.49
LIMCH1-207ENST00000508466 PROCRQ9UNN8 238 aa5.76□□□□□ -1.49
LIMCH1-207ENST00000508466 AKAP13Q12802 2813 aa5.75□□□□□ -1.49
LIMCH1-207ENST00000508466 ENSAO43768 121 aaKnown RBP5.75□□□□□ -1.49
LIMCH1-207ENST00000508466 IGKCP01834 107 aa5.75□□□□□ -1.49
LIMCH1-207ENST00000508466 GAGE2BQ13066 116 aa5.75□□□□□ -1.49
LIMCH1-207ENST00000508466 GAGE2EQ4V326 116 aa5.75□□□□□ -1.49
LIMCH1-207ENST00000508466 DEFB127Q9H1M4 99 aa5.75□□□□□ -1.49
LIMCH1-207ENST00000508466 GAGE2DQ9UEU5 116 aa5.75□□□□□ -1.49
LIMCH1-207ENST00000508466 A0A1W2PQM1 296 aa5.75□□□□□ -1.49
LIMCH1-207ENST00000508466 J3KRW8 73 aa5.75□□□□□ -1.49
LIMCH1-207ENST00000508466 TIMM8AO60220 97 aaPredicted RBP5.75□□□□□ -1.49
LIMCH1-207ENST00000508466 DKK1O94907 266 aa5.75□□□□□ -1.49
LIMCH1-207ENST00000508466 TMEM155Q4W5P6 130 aa5.75□□□□□ -1.49
LIMCH1-207ENST00000508466 DUSP23Q9BVJ7 150 aa5.75□□□□□ -1.49
LIMCH1-207ENST00000508466 TMEM14BQ9NUH8 114 aa5.75□□□□□ -1.49
LIMCH1-207ENST00000508466 COL6A6A6NMZ7 2263 aa5.75□□□□□ -1.49
LIMCH1-207ENST00000508466 FABP5P3A8MUU1 101 aa5.74□□□□□ -1.49
LIMCH1-207ENST00000508466 RIGQ13278 110 aa5.74□□□□□ -1.49
LIMCH1-207ENST00000508466 ZCCHC24Q8N2G6 241 aaKnown RBP5.74□□□□□ -1.49
LIMCH1-207ENST00000508466 ANKRD29Q8N6D5 301 aa5.74□□□□□ -1.49
LIMCH1-207ENST00000508466 KLF14Q8TD94 323 aaPredicted RBP5.74□□□□□ -1.49
LIMCH1-207ENST00000508466 PLEKHB2Q96CS7 222 aa5.74□□□□□ -1.49
LIMCH1-207ENST00000508466 RAXQ9Y2V3 346 aa5.74□□□□□ -1.49
LIMCH1-207ENST00000508466 CREBBPQ92793 2442 aa5.74□□□□□ -1.49
LIMCH1-207ENST00000508466 IGKV1D-37A0A075B6S9 117 aa5.74□□□□□ -1.49
LIMCH1-207ENST00000508466 FAM90A9PA6NNJ1 464 aa5.74□□□□□ -1.49
LIMCH1-207ENST00000508466 IL4P05112 153 aa5.74□□□□□ -1.49
LIMCH1-207ENST00000508466 NDUFV3P56181 108 aaKnown RBP5.74□□□□□ -1.49
LIMCH1-207ENST00000508466 SCGB1D4Q6XE38 83 aa5.74□□□□□ -1.49
LIMCH1-207ENST00000508466 ORMDL3Q8N138 153 aa5.74□□□□□ -1.49
LIMCH1-207ENST00000508466 ZNF502Q8TBZ5 544 aa5.74□□□□□ -1.49
LIMCH1-207ENST00000508466 PKIBQ9C010 78 aa5.74□□□□□ -1.49
LIMCH1-207ENST00000508466 SOX21Q9Y651 276 aaPredicted RBP5.74□□□□□ -1.49
LIMCH1-207ENST00000508466 DLL1O00548 723 aa5.73□□□□□ -1.49
LIMCH1-207ENST00000508466 TCL1BO95988 128 aa5.73□□□□□ -1.49
LIMCH1-207ENST00000508466 CT45A10P0DMU9 189 aa5.73□□□□□ -1.49
LIMCH1-207ENST00000508466 KLRD1Q13241 179 aa5.73□□□□□ -1.49
LIMCH1-207ENST00000508466 CFAP126Q5VTH2 177 aa5.73□□□□□ -1.49
LIMCH1-207ENST00000508466 PMS2CLQ68D20 193 aa5.73□□□□□ -1.49
LIMCH1-207ENST00000508466 LINC00596Q86U02 117 aa5.73□□□□□ -1.49
LIMCH1-207ENST00000508466 ZNF436-AS1Q8NC38 126 aaPredicted RBP5.73□□□□□ -1.49
LIMCH1-207ENST00000508466 DLX4Q92988 240 aaPredicted RBP5.73□□□□□ -1.49
LIMCH1-207ENST00000508466 DSCAMO60469 2012 aa5.73□□□□□ -1.49
LIMCH1-207ENST00000508466 SPTAN1Q13813 2472 aaKnown RBP5.73□□□□□ -1.49
LIMCH1-207ENST00000508466 IGKV1D-17A0A075B6S4 117 aa5.73□□□□□ -1.49
LIMCH1-207ENST00000508466 OVOL3O00110 214 aa5.73□□□□□ -1.49
LIMCH1-207ENST00000508466 LAMTOR5O43504 91 aa5.73□□□□□ -1.49
LIMCH1-207ENST00000508466 SPRY3O43610 288 aa5.73□□□□□ -1.49
LIMCH1-207ENST00000508466 HLA-DMBP28068 263 aa5.73□□□□□ -1.49
LIMCH1-207ENST00000508466 TMEM240Q5SV17 173 aa5.73□□□□□ -1.49
LIMCH1-207ENST00000508466 Q86TA4 180 aa5.73□□□□□ -1.49
LIMCH1-207ENST00000508466 RPEQ96AT9 228 aa5.73□□□□□ -1.49
LIMCH1-207ENST00000508466 FBXL15Q9H469 300 aa5.73□□□□□ -1.49
LIMCH1-207ENST00000508466 YAE1D1Q9NRH1 226 aa5.73□□□□□ -1.49
LIMCH1-207ENST00000508466 IGKV2-40A0A087WW87 121 aaPredicted RBP5.73□□□□□ -1.49
LIMCH1-207ENST00000508466 IGKV2D-40P01614 121 aaPredicted RBP5.73□□□□□ -1.49
LIMCH1-207ENST00000508466 IGHV4-39P01824 125 aa5.73□□□□□ -1.49
LIMCH1-207ENST00000508466 ORM1P02763 201 aa5.73□□□□□ -1.49
LIMCH1-207ENST00000508466 GLRXP35754 106 aa5.73□□□□□ -1.49
LIMCH1-207ENST00000508466 Q0VFX4 171 aa5.73□□□□□ -1.49
LIMCH1-207ENST00000508466 RNF138Q8WVD3 245 aa5.73□□□□□ -1.49
LIMCH1-207ENST00000508466 FAM110AQ9BQ89 295 aa5.73□□□□□ -1.49
LIMCH1-207ENST00000508466 SORL1Q92673 2214 aa5.72□□□□□ -1.49
LIMCH1-207ENST00000508466 IGHV3OR16-13A0A075B7E8 117 aa5.72□□□□□ -1.49
LIMCH1-207ENST00000508466 IGHV1-45A0A0A0MS14 117 aa5.72□□□□□ -1.49
LIMCH1-207ENST00000508466 IGHV3-74A0A0B4J1X5 117 aa5.72□□□□□ -1.49
LIMCH1-207ENST00000508466 C9JAW5 83 aa5.72□□□□□ -1.49
LIMCH1-207ENST00000508466 RS1O15537 224 aa5.72□□□□□ -1.49
LIMCH1-207ENST00000508466 SNCGO76070 127 aa5.72□□□□□ -1.49
LIMCH1-207ENST00000508466 COX6A1P12074 109 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 120.7 ms