RNA–Protein interactions for RNA: ENST00000506706.5

RNF4-207, Transcript of ring finger protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF4, Length 2,098 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-207ENST00000506706 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa17.09■□□□□ 0.33
RNF4-207ENST00000506706 C9orf139Q6ZV77 190 aa17.09■□□□□ 0.33
RNF4-207ENST00000506706 ASCL2Q99929 193 aa17.09■□□□□ 0.33
RNF4-207ENST00000506706 SLC50A1Q9BRV3 221 aa17.09■□□□□ 0.33
RNF4-207ENST00000506706 IGKV2-40A0A087WW87 121 aaPredicted RBP17.08■□□□□ 0.33
RNF4-207ENST00000506706 FAM231BA6NCW3 169 aa17.08■□□□□ 0.33
RNF4-207ENST00000506706 IGKV2D-40P01614 121 aaPredicted RBP17.08■□□□□ 0.33
RNF4-207ENST00000506706 TRBV12-3P01733 135 aa17.08■□□□□ 0.33
RNF4-207ENST00000506706 IGHG4P01861 327 aa17.08■□□□□ 0.33
RNF4-207ENST00000506706 PYY3Q5JQD4 70 aa17.08■□□□□ 0.33
RNF4-207ENST00000506706 C16orf54Q6UWD8 224 aa17.08■□□□□ 0.33
RNF4-207ENST00000506706 POLQO75417 2590 aa17.08■□□□□ 0.32
RNF4-207ENST00000506706 IGHV3-49A0A0A0MS15 119 aa17.08■□□□□ 0.32
RNF4-207ENST00000506706 NDUFA4O00483 81 aa17.08■□□□□ 0.32
RNF4-207ENST00000506706 IGHV3-11P01762 117 aa17.08■□□□□ 0.32
RNF4-207ENST00000506706 OR2D3Q8NGH3 330 aa17.08■□□□□ 0.32
RNF4-207ENST00000506706 GTSF1Q8WW33 167 aa17.08■□□□□ 0.32
RNF4-207ENST00000506706 HLA-DMBP28068 263 aa17.07■□□□□ 0.32
RNF4-207ENST00000506706 LCN12Q6JVE5 192 aa17.07■□□□□ 0.32
RNF4-207ENST00000506706 OR4X2Q8NGF9 303 aa17.07■□□□□ 0.32
RNF4-207ENST00000506706 TMEM18Q96B42 140 aa17.07■□□□□ 0.32
RNF4-207ENST00000506706 PTPN13Q12923 2485 aa17.06■□□□□ 0.32
RNF4-207ENST00000506706 APCSP02743 223 aa17.06■□□□□ 0.32
RNF4-207ENST00000506706 CT45A10P0DMU9 189 aa17.06■□□□□ 0.32
RNF4-207ENST00000506706 SAPCD1Q5SSQ6 148 aa17.06■□□□□ 0.32
RNF4-207ENST00000506706 KRTAP1-3Q8IUG1 177 aa17.06■□□□□ 0.32
RNF4-207ENST00000506706 TMEM256Q8N2U0 113 aa17.06■□□□□ 0.32
RNF4-207ENST00000506706 USP9YO00507 2555 aaPredicted RBP17.06■□□□□ 0.32
RNF4-207ENST00000506706 A0A1B0GUS0 222 aa17.06■□□□□ 0.32
RNF4-207ENST00000506706 CYB5R2Q6BCY4 276 aa17.06■□□□□ 0.32
RNF4-207ENST00000506706 Q6YL49 198 aa17.06■□□□□ 0.32
RNF4-207ENST00000506706 RBPMS2Q6ZRY4 209 aaKnown RBP17.06■□□□□ 0.32
RNF4-207ENST00000506706 C8orf49Q96NF6 230 aa17.06■□□□□ 0.32
RNF4-207ENST00000506706 CSPG4Q6UVK1 2322 aa17.06■□□□□ 0.32
RNF4-207ENST00000506706 ZNF705FA8MVS1 300 aaPredicted RBP17.05■□□□□ 0.32
RNF4-207ENST00000506706 PLA2G2AP14555 144 aa17.05■□□□□ 0.32
RNF4-207ENST00000506706 Q0VG73 95 aa17.05■□□□□ 0.32
RNF4-207ENST00000506706 TMEM95Q3KNT9 176 aa17.05■□□□□ 0.32
RNF4-207ENST00000506706 VPREB3Q9UKI3 123 aa17.05■□□□□ 0.32
RNF4-207ENST00000506706 A0A1B0GXF2 115 aa17.05■□□□□ 0.32
RNF4-207ENST00000506706 CRIP1P50238 77 aa17.05■□□□□ 0.32
RNF4-207ENST00000506706 KIAA1644Q3SXP7 199 aa17.05■□□□□ 0.32
RNF4-207ENST00000506706 LCNL1Q6ZST4 164 aa17.05■□□□□ 0.32
RNF4-207ENST00000506706 PGLYRP4Q96LB8 373 aa17.05■□□□□ 0.32
RNF4-207ENST00000506706 J3QKU1 62 aa17.04■□□□□ 0.32
RNF4-207ENST00000506706 UNQ9165/PRO28630Q6UXU0 137 aa17.04■□□□□ 0.32
RNF4-207ENST00000506706 PRR25Q96S07 402 aa17.04■□□□□ 0.32
RNF4-207ENST00000506706 TP53TG3Q9ULZ0 132 aa17.04■□□□□ 0.32
RNF4-207ENST00000506706 CAMPP49913 170 aa17.03■□□□□ 0.32
RNF4-207ENST00000506706 FAM209BQ5JX69 171 aa17.03■□□□□ 0.32
RNF4-207ENST00000506706 GDF5OSQ5U4N7 250 aa17.03■□□□□ 0.32
RNF4-207ENST00000506706 COX8CQ7Z4L0 72 aa17.03■□□□□ 0.32
RNF4-207ENST00000506706 VGLL1Q99990 258 aa17.03■□□□□ 0.32
RNF4-207ENST00000506706 PRRC2AP48634 2157 aaKnown RBP17.03■□□□□ 0.32
RNF4-207ENST00000506706 HBBP68871 147 aa17.03■□□□□ 0.32
RNF4-207ENST00000506706 SLAQ13239 276 aa17.03■□□□□ 0.32
RNF4-207ENST00000506706 BAGE3Q86Y29 109 aa17.03■□□□□ 0.32
RNF4-207ENST00000506706 CENPEQ02224 2701 aa17.03■□□□□ 0.32
RNF4-207ENST00000506706 NUPR1O60356 82 aa17.02■□□□□ 0.32
RNF4-207ENST00000506706 GZMBP10144 247 aa17.02■□□□□ 0.32
RNF4-207ENST00000506706 GLMPQ8WWB7 406 aa17.02■□□□□ 0.32
RNF4-207ENST00000506706 RBAKDNA6NC62 111 aa17.01■□□□□ 0.31
RNF4-207ENST00000506706 FOXA3P55318 350 aaPredicted RBP17.01■□□□□ 0.31
RNF4-207ENST00000506706 OR10J3Q5JRS4 329 aa17.01■□□□□ 0.31
RNF4-207ENST00000506706 C8orf86Q6ZUL3 223 aa17.01■□□□□ 0.31
RNF4-207ENST00000506706 RNF182Q8N6D2 247 aa17.01■□□□□ 0.31
RNF4-207ENST00000506706 PSMB8P28062 276 aa17.01■□□□□ 0.31
RNF4-207ENST00000506706 SRIP30626 198 aa17.01■□□□□ 0.31
RNF4-207ENST00000506706 MRPL53Q96EL3 112 aaKnown RBP17.01■□□□□ 0.31
RNF4-207ENST00000506706 NPFFR1Q9GZQ6 430 aa17.01■□□□□ 0.31
RNF4-207ENST00000506706 NAV2Q8IVL1 2488 aa17■□□□□ 0.31
RNF4-207ENST00000506706 TMEM89A2RUT3 159 aa17■□□□□ 0.31
RNF4-207ENST00000506706 FAM162BQ5T6X4 162 aa17■□□□□ 0.31
RNF4-207ENST00000506706 Q8TAT8 98 aa17■□□□□ 0.31
RNF4-207ENST00000506706 NDFIP1Q9BT67 221 aa17■□□□□ 0.31
RNF4-207ENST00000506706 TRAV8-2A0A0B4J237 113 aa17■□□□□ 0.31
RNF4-207ENST00000506706 PRAC2D3DTV9 90 aa17■□□□□ 0.31
RNF4-207ENST00000506706 ESDP10768 282 aa17■□□□□ 0.31
RNF4-207ENST00000506706 PSMG3-AS1Q96PY0 264 aa17■□□□□ 0.31
RNF4-207ENST00000506706 SMAD7O15105 426 aaKnown RBP16.99■□□□□ 0.31
RNF4-207ENST00000506706 SH2D1AO60880 128 aa16.99■□□□□ 0.31
RNF4-207ENST00000506706 SERF1AO75920 110 aa16.99■□□□□ 0.31
RNF4-207ENST00000506706 LINC00310P59036 64 aa16.99■□□□□ 0.31
RNF4-207ENST00000506706 S100A12P80511 92 aa16.99■□□□□ 0.31
RNF4-207ENST00000506706 PEF1Q9UBV8 284 aaKnown RBP16.99■□□□□ 0.31
RNF4-207ENST00000506706 A0A1W2PS18 150 aa16.98■□□□□ 0.31
RNF4-207ENST00000506706 A8MWP6 167 aa16.98■□□□□ 0.31
RNF4-207ENST00000506706 HOXA3O43365 443 aaPredicted RBP16.98■□□□□ 0.31
RNF4-207ENST00000506706 HIST2H2BCQ6DN03 193 aa16.98■□□□□ 0.31
RNF4-207ENST00000506706 SSBP4Q9BWG4 385 aaPredicted RBP16.98■□□□□ 0.31
RNF4-207ENST00000506706 PRDM13Q9H4Q3 707 aa16.98■□□□□ 0.31
RNF4-207ENST00000506706 CLEC5AQ9NY25 188 aa16.98■□□□□ 0.31
RNF4-207ENST00000506706 ABCA12Q86UK0 2595 aa16.98■□□□□ 0.31
RNF4-207ENST00000506706 F2Z2F3 143 aa16.98■□□□□ 0.31
RNF4-207ENST00000506706 JOSD1Q15040 202 aaPredicted RBP16.98■□□□□ 0.31
RNF4-207ENST00000506706 DNLZQ5SXM8 178 aa16.98■□□□□ 0.31
RNF4-207ENST00000506706 ERCC8Q13216 396 aa16.97■□□□□ 0.31
RNF4-207ENST00000506706 C16orf92Q96LL3 132 aa16.97■□□□□ 0.31
RNF4-207ENST00000506706 TMEM189A5PLL7 270 aa16.97■□□□□ 0.31
RNF4-207ENST00000506706 HAX1O00165 279 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms