RNA–Protein interactions for RNA: ENST00000497179.1

USP11-212, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 5

Gene USP11, Length 900 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-212ENST00000497179 MAP1LC3B2A6NCE7 125 aa10.63□□□□□ -0.71
USP11-212ENST00000497179 FHITP49789 147 aa10.63□□□□□ -0.71
USP11-212ENST00000497179 LYPD1Q8N2G4 141 aa10.63□□□□□ -0.71
USP11-212ENST00000497179 FAM213BQ8TBF2 198 aa10.63□□□□□ -0.71
USP11-212ENST00000497179 RPUSD4Q96CM3 377 aaKnown RBP10.63□□□□□ -0.71
USP11-212ENST00000497179 CLUHP3Q96NS8 147 aa10.63□□□□□ -0.71
USP11-212ENST00000497179 ASCL2Q99929 193 aa10.63□□□□□ -0.71
USP11-212ENST00000497179 MAP1LC3BQ9GZQ8 125 aa10.63□□□□□ -0.71
USP11-212ENST00000497179 AAMDCQ9H7C9 122 aa10.63□□□□□ -0.71
USP11-212ENST00000497179 BOLA1Q9Y3E2 137 aa10.63□□□□□ -0.71
USP11-212ENST00000497179 A8MTW9 85 aa10.62□□□□□ -0.71
USP11-212ENST00000497179 BOLA2-SMG1P6H3BVE0 249 aa10.62□□□□□ -0.71
USP11-212ENST00000497179 DUSP14O95147 198 aaKnown RBP10.62□□□□□ -0.71
USP11-212ENST00000497179 RAB5CP51148 216 aa10.62□□□□□ -0.71
USP11-212ENST00000497179 ICAM4Q14773 271 aa10.62□□□□□ -0.71
USP11-212ENST00000497179 MORN3Q6PF18 240 aaPredicted RBP10.62□□□□□ -0.71
USP11-212ENST00000497179 EXOC3-AS1Q8N2X6 119 aa10.62□□□□□ -0.71
USP11-212ENST00000497179 TM2D3Q9BRN9 247 aa10.62□□□□□ -0.71
USP11-212ENST00000497179 TMEM167BQ9NRX6 74 aa10.62□□□□□ -0.71
USP11-212ENST00000497179 ZNF705FA8MVS1 300 aaPredicted RBP10.61□□□□□ -0.71
USP11-212ENST00000497179 M0R3E3 92 aa10.61□□□□□ -0.71
USP11-212ENST00000497179 UBE2CO00762 179 aa10.61□□□□□ -0.71
USP11-212ENST00000497179 NHLRC4P0CG21 123 aaPredicted RBP10.61□□□□□ -0.71
USP11-212ENST00000497179 SULT1A2P50226 295 aa10.61□□□□□ -0.71
USP11-212ENST00000497179 RANP62826 216 aaKnown RBP10.61□□□□□ -0.71
USP11-212ENST00000497179 OR8A1Q8NGG7 326 aa10.61□□□□□ -0.71
USP11-212ENST00000497179 MBD3L1Q8WWY6 194 aa10.61□□□□□ -0.71
USP11-212ENST00000497179 CSTL1Q9H114 145 aa10.61□□□□□ -0.71
USP11-212ENST00000497179 Q9H3A6 140 aa10.61□□□□□ -0.71
USP11-212ENST00000497179 HUWE1Q7Z6Z7 4374 aaKnown RBP10.6□□□□□ -0.71
USP11-212ENST00000497179 PRAC2D3DTV9 90 aa10.6□□□□□ -0.71
USP11-212ENST00000497179 CNN1P51911 297 aaKnown RBP10.6□□□□□ -0.71
USP11-212ENST00000497179 FGF8P55075 233 aaPredicted RBP10.6□□□□□ -0.71
USP11-212ENST00000497179 HIST1H1AQ02539 215 aaPredicted RBP10.6□□□□□ -0.71
USP11-212ENST00000497179 IQCF2Q8IXL9 164 aa10.6□□□□□ -0.71
USP11-212ENST00000497179 OR4B1Q8NGF8 309 aa10.6□□□□□ -0.71
USP11-212ENST00000497179 OTORQ9NRC9 128 aa10.6□□□□□ -0.71
USP11-212ENST00000497179 TENM3Q9P273 2699 aa10.59□□□□□ -0.71
USP11-212ENST00000497179 CA1P00915 261 aaPredicted RBP10.59□□□□□ -0.71
USP11-212ENST00000497179 IGKV3-20P01619 116 aa10.59□□□□□ -0.71
USP11-212ENST00000497179 ZNF705DP0CH99 300 aaPredicted RBP10.59□□□□□ -0.71
USP11-212ENST00000497179 ZNF705BP0CI00 300 aaPredicted RBP10.59□□□□□ -0.71
USP11-212ENST00000497179 AMTNQ6UX39 209 aa10.59□□□□□ -0.71
USP11-212ENST00000497179 Q6ZWC4 215 aa10.59□□□□□ -0.71
USP11-212ENST00000497179 SPATA25Q9BR10 227 aa10.59□□□□□ -0.71
USP11-212ENST00000497179 NPIPB6E9PJ23 425 aa10.58□□□□□ -0.72
USP11-212ENST00000497179 GIG44P09565 113 aaPredicted RBP10.58□□□□□ -0.72
USP11-212ENST00000497179 H2AFB1P0C5Y9 115 aa10.58□□□□□ -0.72
USP11-212ENST00000497179 PRB4P10163 310 aaPredicted RBP10.58□□□□□ -0.72
USP11-212ENST00000497179 NUTF2P61970 127 aaKnown RBP10.58□□□□□ -0.72
USP11-212ENST00000497179 FAM74A1Q5RGS3 127 aa10.58□□□□□ -0.72
USP11-212ENST00000497179 OR10J6PQ8NGY7 276 aa10.58□□□□□ -0.72
USP11-212ENST00000497179 SFT2D1Q8WV19 159 aa10.58□□□□□ -0.72
USP11-212ENST00000497179 TMPRSS5Q9H3S3 457 aa10.58□□□□□ -0.72
USP11-212ENST00000497179 A0A1W2PRE2 83 aa10.57□□□□□ -0.72
USP11-212ENST00000497179 CSN1S1P47710 185 aa10.57□□□□□ -0.72
USP11-212ENST00000497179 ALKAL2Q6UX46 152 aa10.57□□□□□ -0.72
USP11-212ENST00000497179 ARL6IP6Q8N6S5 226 aa10.57□□□□□ -0.72
USP11-212ENST00000497179 C1QTNF4Q9BXJ3 329 aa10.57□□□□□ -0.72
USP11-212ENST00000497179 SLC35B3Q9H1N7 401 aa10.57□□□□□ -0.72
USP11-212ENST00000497179 ZMAT4Q9H898 229 aa10.57□□□□□ -0.72
USP11-212ENST00000497179 TP53TG1Q9Y2A0 90 aa10.57□□□□□ -0.72
USP11-212ENST00000497179 AGRNO00468 2067 aa10.57□□□□□ -0.72
USP11-212ENST00000497179 TRAV1-1A0A0B4J248 108 aa10.56□□□□□ -0.72
USP11-212ENST00000497179 PGPA6NDG6 321 aa10.56□□□□□ -0.72
USP11-212ENST00000497179 GGTLC3B5MD39 225 aa10.56□□□□□ -0.72
USP11-212ENST00000497179 DEFB135Q30KP9 77 aa10.56□□□□□ -0.72
USP11-212ENST00000497179 RXFP4Q8TDU9 374 aa10.56□□□□□ -0.72
USP11-212ENST00000497179 RNF183Q96D59 192 aa10.56□□□□□ -0.72
USP11-212ENST00000497179 RETNQ9HD89 108 aa10.56□□□□□ -0.72
USP11-212ENST00000497179 YTHDF2Q9Y5A9 579 aaKnown RBP10.56□□□□□ -0.72
USP11-212ENST00000497179 ARL2-SNX15V9GYD0 113 aa10.56□□□□□ -0.72
USP11-212ENST00000497179 STAB2Q8WWQ8 2551 aa10.55□□□□□ -0.72
USP11-212ENST00000497179 IGKV2-40A0A087WW87 121 aaPredicted RBP10.55□□□□□ -0.72
USP11-212ENST00000497179 DIRC3C9JPN6 131 aa10.55□□□□□ -0.72
USP11-212ENST00000497179 IGKV2D-40P01614 121 aaPredicted RBP10.55□□□□□ -0.72
USP11-212ENST00000497179 AMBPP02760 352 aa10.55□□□□□ -0.72
USP11-212ENST00000497179 C9orf47Q6ZRZ4 202 aa10.55□□□□□ -0.72
USP11-212ENST00000497179 C5orf17Q8NAS9 161 aa10.55□□□□□ -0.72
USP11-212ENST00000497179 CMTM2Q8TAZ6 248 aa10.55□□□□□ -0.72
USP11-212ENST00000497179 RCHY1Q96PM5 261 aa10.55□□□□□ -0.72
USP11-212ENST00000497179 ODF3Q96PU9 254 aa10.55□□□□□ -0.72
USP11-212ENST00000497179 A0A1B0GV50 99 aa10.54□□□□□ -0.72
USP11-212ENST00000497179 RBAKDNA6NC62 111 aa10.54□□□□□ -0.72
USP11-212ENST00000497179 FAM74A7A6NL05 159 aa10.54□□□□□ -0.72
USP11-212ENST00000497179 SPRY2O43597 315 aa10.54□□□□□ -0.72
USP11-212ENST00000497179 HBE1P02100 147 aa10.54□□□□□ -0.72
USP11-212ENST00000497179 SLC25A5P05141 298 aaKnown RBP10.54□□□□□ -0.72
USP11-212ENST00000497179 FXYD7P58549 80 aa10.54□□□□□ -0.72
USP11-212ENST00000497179 UBE2G2P60604 165 aa10.54□□□□□ -0.72
USP11-212ENST00000497179 CSNK1G2-AS1Q8NCQ2 148 aa10.54□□□□□ -0.72
USP11-212ENST00000497179 LINC00477Q96M19 166 aa10.54□□□□□ -0.72
USP11-212ENST00000497179 OVOL2Q9BRP0 275 aa10.54□□□□□ -0.72
USP11-212ENST00000497179 NKX6-2Q9C056 277 aaPredicted RBP10.54□□□□□ -0.72
USP11-212ENST00000497179 XCL2Q9UBD3 114 aa10.54□□□□□ -0.72
USP11-212ENST00000497179 ZNF705EA8MWA4 302 aaPredicted RBP10.53□□□□□ -0.72
USP11-212ENST00000497179 TEX46H3BTG2 121 aa10.53□□□□□ -0.72
USP11-212ENST00000497179 CT45A10P0DMU9 189 aa10.53□□□□□ -0.72
USP11-212ENST00000497179 PPT1P50897 306 aa10.53□□□□□ -0.72
USP11-212ENST00000497179 SUMO1P63165 101 aaKnown RBP10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 102.7 ms