RNA–Protein interactions for RNA: ENST00000494255.5

TRA2A-209, Transcript of transformer 2 alpha homolog, humanhuman

TSL 1 (best)

Gene TRA2A, Length 1,653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-209ENST00000494255 HMGB3O15347 200 aaKnown RBP9.13□□□□□ -0.95
TRA2A-209ENST00000494255 EIF3GO75821 320 aaKnown RBP eCLIP9.13□□□□□ -0.95
TRA2A-209ENST00000494255 ZNF705DP0CH99 300 aaPredicted RBP9.13□□□□□ -0.95
TRA2A-209ENST00000494255 ZNF705BP0CI00 300 aaPredicted RBP9.13□□□□□ -0.95
TRA2A-209ENST00000494255 CNN1P51911 297 aaKnown RBP9.13□□□□□ -0.95
TRA2A-209ENST00000494255 ZNF503Q96F45 646 aa9.13□□□□□ -0.95
TRA2A-209ENST00000494255 PPP1R14DQ9NXH3 145 aa9.13□□□□□ -0.95
TRA2A-209ENST00000494255 XCL2Q9UBD3 114 aa9.13□□□□□ -0.95
TRA2A-209ENST00000494255 A8MTW9 85 aa9.12□□□□□ -0.95
TRA2A-209ENST00000494255 ARL14EPLP0DKL9 152 aa9.12□□□□□ -0.95
TRA2A-209ENST00000494255 ICAM4Q14773 271 aa9.12□□□□□ -0.95
TRA2A-209ENST00000494255 LGALSLQ3ZCW2 172 aaPredicted RBP9.12□□□□□ -0.95
TRA2A-209ENST00000494255 ZFP69Q49AA0 526 aa9.12□□□□□ -0.95
TRA2A-209ENST00000494255 LYPD1Q8N2G4 141 aa9.12□□□□□ -0.95
TRA2A-209ENST00000494255 PHYHIPLQ96FC7 376 aa9.12□□□□□ -0.95
TRA2A-209ENST00000494255 CXorf1O96002 111 aa9.11□□□□□ -0.95
TRA2A-209ENST00000494255 AMBPP02760 352 aa9.11□□□□□ -0.95
TRA2A-209ENST00000494255 GIG44P09565 113 aaPredicted RBP9.11□□□□□ -0.95
TRA2A-209ENST00000494255 SEC11BP0C7V7 166 aa9.11□□□□□ -0.95
TRA2A-209ENST00000494255 STAG3L2P0CL84 134 aa9.11□□□□□ -0.95
TRA2A-209ENST00000494255 STAG3L3P0CL85 134 aa9.11□□□□□ -0.95
TRA2A-209ENST00000494255 TPT1P13693 172 aaKnown RBP9.11□□□□□ -0.95
TRA2A-209ENST00000494255 FXYD7P58549 80 aa9.11□□□□□ -0.95
TRA2A-209ENST00000494255 EXOC3-AS1Q8N2X6 119 aa9.11□□□□□ -0.95
TRA2A-209ENST00000494255 WWC2-AS2Q96NR7 200 aa9.11□□□□□ -0.95
TRA2A-209ENST00000494255 RARRES2Q99969 163 aa9.11□□□□□ -0.95
TRA2A-209ENST00000494255 SLC35B3Q9H1N7 401 aa9.11□□□□□ -0.95
TRA2A-209ENST00000494255 CTXND1A0A1B0GTU2 59 aa9.1□□□□□ -0.95
TRA2A-209ENST00000494255 PRB4P10163 310 aaPredicted RBP9.1□□□□□ -0.95
TRA2A-209ENST00000494255 CSN1S1P47710 185 aa9.1□□□□□ -0.95
TRA2A-209ENST00000494255 RANP62826 216 aaKnown RBP9.1□□□□□ -0.95
TRA2A-209ENST00000494255 CD300CQ08708 224 aa9.1□□□□□ -0.95
TRA2A-209ENST00000494255 BAP18Q8IXM2 172 aa9.1□□□□□ -0.95
TRA2A-209ENST00000494255 OR11H2Q8NH07 326 aa9.1□□□□□ -0.95
TRA2A-209ENST00000494255 Q9H3A6 140 aa9.1□□□□□ -0.95
TRA2A-209ENST00000494255 COL7A1Q02388 2944 aa9.1□□□□□ -0.95
TRA2A-209ENST00000494255 PRAC2D3DTV9 90 aa9.1□□□□□ -0.95
TRA2A-209ENST00000494255 BOLA2-SMG1P6H3BVE0 249 aa9.1□□□□□ -0.95
TRA2A-209ENST00000494255 M0R3E3 92 aa9.1□□□□□ -0.95
TRA2A-209ENST00000494255 GCHFRP30047 84 aa9.1□□□□□ -0.95
TRA2A-209ENST00000494255 FAM74A1Q5RGS3 127 aa9.1□□□□□ -0.95
TRA2A-209ENST00000494255 AMTNQ6UX39 209 aa9.1□□□□□ -0.95
TRA2A-209ENST00000494255 IQCF2Q8IXL9 164 aa9.1□□□□□ -0.95
TRA2A-209ENST00000494255 STOML3Q8TAV4 291 aa9.1□□□□□ -0.95
TRA2A-209ENST00000494255 UMAD1C9J7I0 102 aa9.09□□□□□ -0.95
TRA2A-209ENST00000494255 EIF5AL1Q6IS14 154 aaKnown RBP9.09□□□□□ -0.95
TRA2A-209ENST00000494255 OTORQ9NRC9 128 aa9.09□□□□□ -0.95
TRA2A-209ENST00000494255 TMEM167BQ9NRX6 74 aa9.09□□□□□ -0.95
TRA2A-209ENST00000494255 NPIPB6E9PJ23 425 aa9.08□□□□□ -0.96
TRA2A-209ENST00000494255 M0R2Z0 102 aa9.08□□□□□ -0.96
TRA2A-209ENST00000494255 TSPOP30536 169 aa9.08□□□□□ -0.96
TRA2A-209ENST00000494255 ZNF726P1Q15940 193 aa9.08□□□□□ -0.96
TRA2A-209ENST00000494255 SPINK13Q1W4C9 94 aa9.08□□□□□ -0.96
TRA2A-209ENST00000494255 SSX7Q7RTT5 188 aa9.08□□□□□ -0.96
TRA2A-209ENST00000494255 CSNK1G2-AS1Q8NCQ2 148 aa9.08□□□□□ -0.96
TRA2A-209ENST00000494255 CMTM2Q8TAZ6 248 aa9.08□□□□□ -0.96
TRA2A-209ENST00000494255 TMED6Q8WW62 240 aa9.08□□□□□ -0.96
TRA2A-209ENST00000494255 GOLT1BQ9Y3E0 138 aa9.08□□□□□ -0.96
TRA2A-209ENST00000494255 PGPA6NDG6 321 aa9.07□□□□□ -0.96
TRA2A-209ENST00000494255 INSP01308 110 aa9.07□□□□□ -0.96
TRA2A-209ENST00000494255 SLC51BQ86UW2 128 aa9.07□□□□□ -0.96
TRA2A-209ENST00000494255 C9orf62Q8N4C0 152 aa9.07□□□□□ -0.96
TRA2A-209ENST00000494255 RXFP4Q8TDU9 374 aa9.07□□□□□ -0.96
TRA2A-209ENST00000494255 IGF2BP2-AS1Q96M15 143 aa9.07□□□□□ -0.96
TRA2A-209ENST00000494255 DNAH9Q9NYC9 4486 aa9.07□□□□□ -0.96
TRA2A-209ENST00000494255 IGHV3OR16-12A0A075B7B8 117 aa9.07□□□□□ -0.96
TRA2A-209ENST00000494255 IGKV2-40A0A087WW87 121 aaPredicted RBP9.07□□□□□ -0.96
TRA2A-209ENST00000494255 MAP1LC3B2A6NCE7 125 aa9.07□□□□□ -0.96
TRA2A-209ENST00000494255 IGKV2D-40P01614 121 aaPredicted RBP9.07□□□□□ -0.96
TRA2A-209ENST00000494255 LEPP41159 167 aa9.07□□□□□ -0.96
TRA2A-209ENST00000494255 CDKN1BP46527 198 aa9.07□□□□□ -0.96
TRA2A-209ENST00000494255 ERCC8Q13216 396 aa9.07□□□□□ -0.96
TRA2A-209ENST00000494255 TMEM78Q5T7P6 136 aa9.07□□□□□ -0.96
TRA2A-209ENST00000494255 DPPA3Q6W0C5 159 aa9.07□□□□□ -0.96
TRA2A-209ENST00000494255 FAM213BQ8TBF2 198 aa9.07□□□□□ -0.96
TRA2A-209ENST00000494255 LINC00477Q96M19 166 aa9.07□□□□□ -0.96
TRA2A-209ENST00000494255 ODF3Q96PU9 254 aa9.07□□□□□ -0.96
TRA2A-209ENST00000494255 MAP1LC3BQ9GZQ8 125 aa9.07□□□□□ -0.96
TRA2A-209ENST00000494255 EDA2RQ9HAV5 297 aa9.07□□□□□ -0.96
TRA2A-209ENST00000494255 A0A0J9YWU9 116 aa9.06□□□□□ -0.96
TRA2A-209ENST00000494255 ZNF705EA8MWA4 302 aaPredicted RBP9.06□□□□□ -0.96
TRA2A-209ENST00000494255 MIFP14174 115 aa9.06□□□□□ -0.96
TRA2A-209ENST00000494255 FGF8P55075 233 aaPredicted RBP9.06□□□□□ -0.96
TRA2A-209ENST00000494255 SUN5Q8TC36 379 aa9.06□□□□□ -0.96
TRA2A-209ENST00000494255 TMEM208Q9BTX3 173 aa9.06□□□□□ -0.96
TRA2A-209ENST00000494255 RPH3ALQ9UNE2 315 aa9.06□□□□□ -0.96
TRA2A-209ENST00000494255 NBEAL2Q6ZNJ1 2754 aa9.05□□□□□ -0.96
TRA2A-209ENST00000494255 RBAKDNA6NC62 111 aa9.05□□□□□ -0.96
TRA2A-209ENST00000494255 SLC25A5P05141 298 aaKnown RBP9.05□□□□□ -0.96
TRA2A-209ENST00000494255 CT45A10P0DMU9 189 aa9.05□□□□□ -0.96
TRA2A-209ENST00000494255 FHITP49789 147 aa9.05□□□□□ -0.96
TRA2A-209ENST00000494255 ZNF705AQ6ZN79 300 aaPredicted RBP9.05□□□□□ -0.96
TRA2A-209ENST00000494255 C9orf47Q6ZRZ4 202 aa9.05□□□□□ -0.96
TRA2A-209ENST00000494255 ARL6IP6Q8N6S5 226 aa9.05□□□□□ -0.96
TRA2A-209ENST00000494255 AGPAT4-IT1Q9H0P7 198 aa9.05□□□□□ -0.96
TRA2A-209ENST00000494255 PLA2G2EQ9NZK7 142 aa9.05□□□□□ -0.96
TRA2A-209ENST00000494255 TRAV12-2A0A075B6T6 113 aa9.04□□□□□ -0.96
TRA2A-209ENST00000494255 DIRC3C9JPN6 131 aa9.04□□□□□ -0.96
TRA2A-209ENST00000494255 RAB5CP51148 216 aa9.04□□□□□ -0.96
TRA2A-209ENST00000494255 C5orf17Q8NAS9 161 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms