RNA–Protein interactions for RNA: ENST00000494090.6

COL27A1-207, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 5,329 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-207ENST00000494090 WDR86Q86TI4 376 aa15.42■□□□□ 0.06
COL27A1-207ENST00000494090 CEACAM8P31997 349 aaPredicted RBP15.41■□□□□ 0.06
COL27A1-207ENST00000494090 IGLV3-1P01715 115 aa15.41■□□□□ 0.06
COL27A1-207ENST00000494090 SPTBN1Q01082 2364 aaKnown RBP15.41■□□□□ 0.06
COL27A1-207ENST00000494090 PLXNA2O75051 1894 aa15.41■□□□□ 0.06
COL27A1-207ENST00000494090 SPTBN2O15020 2390 aa15.41■□□□□ 0.06
COL27A1-207ENST00000494090 IGHV2-70DA0A0C4DH43 119 aa15.41■□□□□ 0.06
COL27A1-207ENST00000494090 LEPROTO15243 131 aa15.41■□□□□ 0.06
COL27A1-207ENST00000494090 LY6HO94772 140 aa15.41■□□□□ 0.06
COL27A1-207ENST00000494090 ZNRD1Q9P1U0 126 aa15.4■□□□□ 0.06
COL27A1-207ENST00000494090 ATP6V0E1O15342 81 aa15.4■□□□□ 0.06
COL27A1-207ENST00000494090 C17orf58Q2M2W7 97 aa15.39■□□□□ 0.05
COL27A1-207ENST00000494090 LINC00311Q8N616 119 aa15.39■□□□□ 0.05
COL27A1-207ENST00000494090 ARMS2P0C7Q2 107 aa15.39■□□□□ 0.05
COL27A1-207ENST00000494090 RIPPLY3P57055 190 aa15.39■□□□□ 0.05
COL27A1-207ENST00000494090 C20orf144Q9BQM9 153 aa15.39■□□□□ 0.05
COL27A1-207ENST00000494090 TIMM21Q9BVV7 248 aa15.39■□□□□ 0.05
COL27A1-207ENST00000494090 SELENOKQ9Y6D0 94 aa15.39■□□□□ 0.05
COL27A1-207ENST00000494090 A8MWP6 167 aa15.39■□□□□ 0.05
COL27A1-207ENST00000494090 SMKR1H3BMG3 65 aa15.39■□□□□ 0.05
COL27A1-207ENST00000494090 C18orf32Q8TCD1 76 aa15.38■□□□□ 0.05
COL27A1-207ENST00000494090 POLR3KQ9Y2Y1 108 aaPredicted RBP15.38■□□□□ 0.05
COL27A1-207ENST00000494090 MCRIP2Q9BUT9 160 aaKnown RBP15.38■□□□□ 0.05
COL27A1-207ENST00000494090 ZNF503-AS2A6NEH8 195 aa15.38■□□□□ 0.05
COL27A1-207ENST00000494090 ZC2HC1BQ5TFG8 222 aa15.38■□□□□ 0.05
COL27A1-207ENST00000494090 DNAJC30Q96LL9 226 aa15.38■□□□□ 0.05
COL27A1-207ENST00000494090 NAA38Q9BRA0 125 aaKnown RBP15.38■□□□□ 0.05
COL27A1-207ENST00000494090 UBE2V1Q13404 147 aa15.38■□□□□ 0.05
COL27A1-207ENST00000494090 MGAMO43451 1857 aa15.38■□□□□ 0.05
COL27A1-207ENST00000494090 CYYR1Q96J86 154 aa15.37■□□□□ 0.05
COL27A1-207ENST00000494090 LAMTOR3Q9UHA4 124 aa15.37■□□□□ 0.05
COL27A1-207ENST00000494090 CD5LO43866 347 aa15.37■□□□□ 0.05
COL27A1-207ENST00000494090 KIAA2026Q5HYC2 2103 aa15.37■□□□□ 0.05
COL27A1-207ENST00000494090 DEFB130BP0DP73 79 aa15.37■□□□□ 0.05
COL27A1-207ENST00000494090 DEFB130AP0DP74 79 aa15.37■□□□□ 0.05
COL27A1-207ENST00000494090 CFHR2P36980 270 aa15.37■□□□□ 0.05
COL27A1-207ENST00000494090 RUSC1-AS1Q66K80 236 aa15.37■□□□□ 0.05
COL27A1-207ENST00000494090 PRIMA1Q86XR5 153 aa15.36■□□□□ 0.05
COL27A1-207ENST00000494090 WIPF3A6NGB9 483 aa15.36■□□□□ 0.05
COL27A1-207ENST00000494090 C15orf65H3BRN8 121 aa15.36■□□□□ 0.05
COL27A1-207ENST00000494090 TNFRSF6BO95407 300 aa15.36■□□□□ 0.05
COL27A1-207ENST00000494090 IL17RELQ6ZVW7 336 aa15.36■□□□□ 0.05
COL27A1-207ENST00000494090 KIR3DS1Q14943 382 aa15.36■□□□□ 0.05
COL27A1-207ENST00000494090 FAM231DQ6ZW35 169 aa15.36■□□□□ 0.05
COL27A1-207ENST00000494090 CACNA1GO43497 2377 aa15.36■□□□□ 0.05
COL27A1-207ENST00000494090 TRAV13-1A0A0B4J241 112 aa15.36■□□□□ 0.05
COL27A1-207ENST00000494090 TRBV19A0A075B6N1 114 aa15.35■□□□□ 0.05
COL27A1-207ENST00000494090 PRSS46E5RG02 174 aa15.35■□□□□ 0.05
COL27A1-207ENST00000494090 IL15RAQ13261 267 aa15.35■□□□□ 0.05
COL27A1-207ENST00000494090 PRR30Q53SZ7 412 aaPredicted RBP15.35■□□□□ 0.05
COL27A1-207ENST00000494090 TEX36Q5VZQ5 186 aa15.35■□□□□ 0.05
COL27A1-207ENST00000494090 NDUFA4O00483 81 aa15.35■□□□□ 0.05
COL27A1-207ENST00000494090 DOPEY2Q9Y3R5 2298 aa15.35■□□□□ 0.05
COL27A1-207ENST00000494090 A0A087WWL8 130 aa15.35■□□□□ 0.05
COL27A1-207ENST00000494090 NEGR1Q7Z3B1 354 aa15.35■□□□□ 0.05
COL27A1-207ENST00000494090 VOPP1Q96AW1 172 aa15.35■□□□□ 0.05
COL27A1-207ENST00000494090 IGLV1-44P01699 117 aa15.34■□□□□ 0.05
COL27A1-207ENST00000494090 PLA2G2CQ5R387 149 aa15.34■□□□□ 0.05
COL27A1-207ENST00000494090 V9GYV3 84 aa15.34■□□□□ 0.05
COL27A1-207ENST00000494090 J3QKU1 62 aa15.34■□□□□ 0.05
COL27A1-207ENST00000494090 NDUFS6O75380 124 aaKnown RBP15.34■□□□□ 0.05
COL27A1-207ENST00000494090 HAPLN4Q86UW8 402 aa15.34■□□□□ 0.05
COL27A1-207ENST00000494090 DAD1P61803 113 aa15.34■□□□□ 0.05
COL27A1-207ENST00000494090 Q96MF0 132 aa15.34■□□□□ 0.05
COL27A1-207ENST00000494090 TICRRQ7Z2Z1 1910 aa15.33■□□□□ 0.05
COL27A1-207ENST00000494090 TMEM141Q96I45 108 aa15.33■□□□□ 0.05
COL27A1-207ENST00000494090 HEATR1Q9H583 2144 aaKnown RBP15.33■□□□□ 0.04
COL27A1-207ENST00000494090 FANCMQ8IYD8 2048 aa15.33■□□□□ 0.04
COL27A1-207ENST00000494090 A0A1B0GUS0 222 aa15.33■□□□□ 0.04
COL27A1-207ENST00000494090 EREGO14944 169 aa15.33■□□□□ 0.04
COL27A1-207ENST00000494090 IGHV2-5P01817 119 aa15.33■□□□□ 0.04
COL27A1-207ENST00000494090 CR1LQ2VPA4 569 aa15.33■□□□□ 0.04
COL27A1-207ENST00000494090 FAM104BQ5XKR9 115 aa15.33■□□□□ 0.04
COL27A1-207ENST00000494090 ANAPC13Q9BS18 74 aa15.33■□□□□ 0.04
COL27A1-207ENST00000494090 CHAC1Q9BUX1 264 aa15.33■□□□□ 0.04
COL27A1-207ENST00000494090 LOXP28300 417 aaPredicted RBP15.33■□□□□ 0.04
COL27A1-207ENST00000494090 APOC4P55056 127 aa15.33■□□□□ 0.04
COL27A1-207ENST00000494090 KLF12Q9Y4X4 402 aa15.33■□□□□ 0.04
COL27A1-207ENST00000494090 TMEM213A2RRL7 107 aa15.32■□□□□ 0.04
COL27A1-207ENST00000494090 DLX4Q92988 240 aaPredicted RBP15.32■□□□□ 0.04
COL27A1-207ENST00000494090 PI4KAP42356 2102 aa15.32■□□□□ 0.04
COL27A1-207ENST00000494090 SMIM27A0A1W2PRY6 76 aa15.32■□□□□ 0.04
COL27A1-207ENST00000494090 TMEM14CQ9P0S9 112 aa15.32■□□□□ 0.04
COL27A1-207ENST00000494090 FER1L5A0AVI2 2057 aa15.32■□□□□ 0.04
COL27A1-207ENST00000494090 RIF1Q5UIP0 2472 aaKnown RBP15.32■□□□□ 0.04
COL27A1-207ENST00000494090 NCOR1O75376 2440 aa15.32■□□□□ 0.04
COL27A1-207ENST00000494090 HEATR5AQ86XA9 2040 aa15.32■□□□□ 0.04
COL27A1-207ENST00000494090 TRBV25-1A0A075B6N4 114 aa15.31■□□□□ 0.04
COL27A1-207ENST00000494090 NPC2P61916 151 aa15.31■□□□□ 0.04
COL27A1-207ENST00000494090 C8orf49Q96NF6 230 aa15.31■□□□□ 0.04
COL27A1-207ENST00000494090 DUX4L9Q6RFH8 374 aaPredicted RBP15.31■□□□□ 0.04
COL27A1-207ENST00000494090 DEFB104AQ8WTQ1 72 aa15.31■□□□□ 0.04
COL27A1-207ENST00000494090 INS-IGF2F8WCM5 200 aa15.31■□□□□ 0.04
COL27A1-207ENST00000494090 C2orf82Q6UX34 121 aa15.31■□□□□ 0.04
COL27A1-207ENST00000494090 Q8NFD4 153 aa15.3■□□□□ 0.04
COL27A1-207ENST00000494090 IGHV1OR15-1A0A075B7D0 117 aa15.3■□□□□ 0.04
COL27A1-207ENST00000494090 C11orf52Q96A22 123 aa15.3■□□□□ 0.04
COL27A1-207ENST00000494090 XCL2Q9UBD3 114 aa15.3■□□□□ 0.04
COL27A1-207ENST00000494090 COX11Q9Y6N1 276 aa15.3■□□□□ 0.04
COL27A1-207ENST00000494090 IGLV3-9A0A075B6K5 115 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 179.1 ms