RNA–Protein interactions for RNA: ENST00000483117.1

LAPTM4A-202, Transcript of lysosomal protein transmembrane 4 alpha, humanhuman

TSL 2

Gene LAPTM4A, Length 487 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4A-202ENST00000483117 C8orf59Q8N0T1 100 aaPredicted RBP1.53□□□□□ -2.16
LAPTM4A-202ENST00000483117 ACBD7Q8N6N7 88 aa1.53□□□□□ -2.16
LAPTM4A-202ENST00000483117 ANKRD31Q8N7Z5 1873 aa1.53□□□□□ -2.16
LAPTM4A-202ENST00000483117 LINC00301Q8NCQ3 95 aa1.53□□□□□ -2.16
LAPTM4A-202ENST00000483117 OR8B3Q8NGG8 313 aa1.53□□□□□ -2.16
LAPTM4A-202ENST00000483117 NUP205Q92621 2012 aa1.53□□□□□ -2.16
LAPTM4A-202ENST00000483117 HYLS1Q96M11 299 aa1.53□□□□□ -2.16
LAPTM4A-202ENST00000483117 OR4C12Q96R67 309 aa1.53□□□□□ -2.16
LAPTM4A-202ENST00000483117 RETNLBQ9BQ08 111 aa1.53□□□□□ -2.16
LAPTM4A-202ENST00000483117 SLC35B3Q9H1N7 401 aa1.53□□□□□ -2.16
LAPTM4A-202ENST00000483117 CXCL16Q9H2A7 254 aa1.53□□□□□ -2.16
LAPTM4A-202ENST00000483117 COA4Q9NYJ1 87 aa1.53□□□□□ -2.16
LAPTM4A-202ENST00000483117 COMMD3Q9UBI1 195 aa1.53□□□□□ -2.16
LAPTM4A-202ENST00000483117 NUP210LQ5VU65 1888 aa1.52□□□□□ -2.17
LAPTM4A-202ENST00000483117 SCN4AP35499 1836 aa1.52□□□□□ -2.17
LAPTM4A-202ENST00000483117 FRMPD1Q5SYB0 1578 aa1.52□□□□□ -2.17
LAPTM4A-202ENST00000483117 KDM5BQ9UGL1 1544 aa1.52□□□□□ -2.17
LAPTM4A-202ENST00000483117 COL1A1P02452 1464 aaPredicted RBP1.52□□□□□ -2.17
LAPTM4A-202ENST00000483117 IGLV10-54A0A075B6I4 117 aa1.52□□□□□ -2.17
LAPTM4A-202ENST00000483117 A0A0G2JMM0 328 aa1.52□□□□□ -2.17
LAPTM4A-202ENST00000483117 A0A1W2PPB8 328 aa1.52□□□□□ -2.17
LAPTM4A-202ENST00000483117 hDV103S1A0JD37 113 aa1.52□□□□□ -2.17
LAPTM4A-202ENST00000483117 KIR3DP1A8MWS1 328 aa1.52□□□□□ -2.17
LAPTM4A-202ENST00000483117 ODF3BA8MYP8 253 aa1.52□□□□□ -2.17
LAPTM4A-202ENST00000483117 IGLV3-19P01714 112 aa1.52□□□□□ -2.17
LAPTM4A-202ENST00000483117 TRACP01848 142 aa1.52□□□□□ -2.17
LAPTM4A-202ENST00000483117 AKAIN1P0CW23 69 aa1.52□□□□□ -2.17
LAPTM4A-202ENST00000483117 CRYGAP11844 174 aa1.52□□□□□ -2.17
LAPTM4A-202ENST00000483117 MIFP14174 115 aa1.52□□□□□ -2.17
LAPTM4A-202ENST00000483117 PEBP1P30086 187 aaKnown RBP1.52□□□□□ -2.17
LAPTM4A-202ENST00000483117 ZNF93P35789 620 aaPredicted RBP1.52□□□□□ -2.17
LAPTM4A-202ENST00000483117 SNRPD3P62318 126 aaKnown RBP1.52□□□□□ -2.17
LAPTM4A-202ENST00000483117 ZNF345Q14585 488 aa1.52□□□□□ -2.17
LAPTM4A-202ENST00000483117 KCNRGQ8N5I3 272 aa1.52□□□□□ -2.17
LAPTM4A-202ENST00000483117 OR5AK2Q8NH90 309 aa1.52□□□□□ -2.17
LAPTM4A-202ENST00000483117 RAB37Q96AX2 223 aa1.52□□□□□ -2.17
LAPTM4A-202ENST00000483117 ZC2HC1AQ96GY0 325 aa1.52□□□□□ -2.17
LAPTM4A-202ENST00000483117 SDF2Q99470 211 aa1.52□□□□□ -2.17
LAPTM4A-202ENST00000483117 SLC50A1Q9BRV3 221 aa1.52□□□□□ -2.17
LAPTM4A-202ENST00000483117 FER1L6Q2WGJ9 1857 aa1.52□□□□□ -2.17
LAPTM4A-202ENST00000483117 NUP98P52948 1817 aa1.52□□□□□ -2.17
LAPTM4A-202ENST00000483117 ERBINQ96RT1 1412 aa1.51□□□□□ -2.17
LAPTM4A-202ENST00000483117 ZNF638Q14966 1978 aaKnown RBP1.51□□□□□ -2.17
LAPTM4A-202ENST00000483117 DOCK4Q8N1I0 1966 aa1.51□□□□□ -2.17
LAPTM4A-202ENST00000483117 A0A087WSZ3 146 aa1.51□□□□□ -2.17
LAPTM4A-202ENST00000483117 MUC21A0A0G2JKD1 596 aa1.51□□□□□ -2.17
LAPTM4A-202ENST00000483117 MUC21A0A140T8X8 626 aa1.51□□□□□ -2.17
LAPTM4A-202ENST00000483117 FAM236AA0A1B0GUQ0 79 aa1.51□□□□□ -2.17
LAPTM4A-202ENST00000483117 FAM236BA0A1B0GV22 79 aa1.51□□□□□ -2.17
LAPTM4A-202ENST00000483117 M0R233 179 aa1.51□□□□□ -2.17
LAPTM4A-202ENST00000483117 M0R2P5 195 aa1.51□□□□□ -2.17
LAPTM4A-202ENST00000483117 HYPMO75409 117 aa1.51□□□□□ -2.17
LAPTM4A-202ENST00000483117 UBL3O95164 117 aa1.51□□□□□ -2.17
LAPTM4A-202ENST00000483117 TNFP01375 233 aa1.51□□□□□ -2.17
LAPTM4A-202ENST00000483117 IFNA17P01571 189 aa1.51□□□□□ -2.17
LAPTM4A-202ENST00000483117 CKS2P33552 79 aa1.51□□□□□ -2.17
LAPTM4A-202ENST00000483117 HINT1P49773 126 aaPredicted RBP1.51□□□□□ -2.17
LAPTM4A-202ENST00000483117 DSCR4P56555 118 aaPredicted RBP1.51□□□□□ -2.17
LAPTM4A-202ENST00000483117 PCBD1P61457 104 aa1.51□□□□□ -2.17
LAPTM4A-202ENST00000483117 BLCAPP62952 87 aa1.51□□□□□ -2.17
LAPTM4A-202ENST00000483117 CIRBPQ14011 172 aaKnown RBP1.51□□□□□ -2.17
LAPTM4A-202ENST00000483117 CCSMST1Q4G0I0 132 aa1.51□□□□□ -2.17
LAPTM4A-202ENST00000483117 DEFB134Q4QY38 66 aa1.51□□□□□ -2.17
LAPTM4A-202ENST00000483117 PYDC2Q56P42 97 aa1.51□□□□□ -2.17
LAPTM4A-202ENST00000483117 Q6ZTI0 123 aa1.51□□□□□ -2.17
LAPTM4A-202ENST00000483117 OR5AS1Q8N127 324 aa1.51□□□□□ -2.17
LAPTM4A-202ENST00000483117 LINC00311Q8N616 119 aa1.51□□□□□ -2.17
LAPTM4A-202ENST00000483117 TMEM254Q8TBM7 123 aa1.51□□□□□ -2.17
LAPTM4A-202ENST00000483117 POP5Q969H6 163 aaKnown RBP1.51□□□□□ -2.17
LAPTM4A-202ENST00000483117 MUCL1Q96DR8 90 aa1.51□□□□□ -2.17
LAPTM4A-202ENST00000483117 Q96M85 177 aa1.51□□□□□ -2.17
LAPTM4A-202ENST00000483117 PKMYT1Q99640 499 aa1.51□□□□□ -2.17
LAPTM4A-202ENST00000483117 CST9LQ9H4G1 147 aa1.51□□□□□ -2.17
LAPTM4A-202ENST00000483117 NAA60Q9H7X0 242 aa1.51□□□□□ -2.17
LAPTM4A-202ENST00000483117 SCN3BQ9NY72 215 aa1.51□□□□□ -2.17
LAPTM4A-202ENST00000483117 BOKQ9UMX3 212 aaPredicted RBP1.51□□□□□ -2.17
LAPTM4A-202ENST00000483117 ZFP30Q9Y2G7 519 aa1.51□□□□□ -2.17
LAPTM4A-202ENST00000483117 DNAJC15Q9Y5T4 150 aa1.51□□□□□ -2.17
LAPTM4A-202ENST00000483117 IER3IP1Q9Y5U9 82 aa1.51□□□□□ -2.17
LAPTM4A-202ENST00000483117 NYNRINQ9P2P1 1898 aaKnown RBP1.51□□□□□ -2.17
LAPTM4A-202ENST00000483117 SMARCA4P51532 1647 aa1.51□□□□□ -2.17
LAPTM4A-202ENST00000483117 MAPKBP1O60336 1514 aa1.5□□□□□ -2.17
LAPTM4A-202ENST00000483117 MYH11P35749 1972 aa1.5□□□□□ -2.17
LAPTM4A-202ENST00000483117 MBD5Q9P267 1494 aa1.5□□□□□ -2.17
LAPTM4A-202ENST00000483117 RGS12O14924 1447 aa1.5□□□□□ -2.17
LAPTM4A-202ENST00000483117 SBF1O95248 1867 aa1.5□□□□□ -2.17
LAPTM4A-202ENST00000483117 TRAV12-2A0A075B6T6 113 aa1.5□□□□□ -2.17
LAPTM4A-202ENST00000483117 A0A1W2PNM2 257 aa1.5□□□□□ -2.17
LAPTM4A-202ENST00000483117 E7EUB6 86 aa1.5□□□□□ -2.17
LAPTM4A-202ENST00000483117 MGST1P10620 155 aaKnown RBP1.5□□□□□ -2.17
LAPTM4A-202ENST00000483117 SLC25A4P12235 298 aa1.5□□□□□ -2.17
LAPTM4A-202ENST00000483117 HRES1P13985 223 aa1.5□□□□□ -2.17
LAPTM4A-202ENST00000483117 KRTAP12-4P60329 112 aa1.5□□□□□ -2.17
LAPTM4A-202ENST00000483117 ROMO1P60602 79 aa1.5□□□□□ -2.17
LAPTM4A-202ENST00000483117 CDK6Q00534 326 aa1.5□□□□□ -2.17
LAPTM4A-202ENST00000483117 MEIG1Q5JSS6 88 aa1.5□□□□□ -2.17
LAPTM4A-202ENST00000483117 TEX261Q6UWH6 196 aa1.5□□□□□ -2.17
LAPTM4A-202ENST00000483117 C2orf82Q6UX34 121 aa1.5□□□□□ -2.17
LAPTM4A-202ENST00000483117 OR2T35Q8NGX2 323 aa1.5□□□□□ -2.17
LAPTM4A-202ENST00000483117 ZNF431Q8TF32 576 aaPredicted RBP1.5□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 98.1 ms