RNA–Protein interactions for RNA: ENST00000472442.2

SCAMP4-207, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2

Gene SCAMP4, Length 2,973 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-207ENST00000472442 LY6LH3BQJ8 138 aa10.44□□□□□ -0.74
SCAMP4-207ENST00000472442 LOXL1Q08397 574 aaPredicted RBP10.44□□□□□ -0.74
SCAMP4-207ENST00000472442 OR2K2Q8NGT1 345 aa10.44□□□□□ -0.74
SCAMP4-207ENST00000472442 UBTD1Q9HAC8 227 aa10.44□□□□□ -0.74
SCAMP4-207ENST00000472442 PLXNB1O43157 2135 aa10.43□□□□□ -0.74
SCAMP4-207ENST00000472442 COL12A1Q99715 3063 aa10.43□□□□□ -0.74
SCAMP4-207ENST00000472442 CSMD1Q96PZ7 3565 aa10.43□□□□□ -0.74
SCAMP4-207ENST00000472442 VPS13CQ709C8 3753 aa10.43□□□□□ -0.74
SCAMP4-207ENST00000472442 HCP5Q6MZN7 132 aa10.43□□□□□ -0.74
SCAMP4-207ENST00000472442 SRSF12Q8WXF0 261 aaKnown RBP10.43□□□□□ -0.74
SCAMP4-207ENST00000472442 INSIG2Q9Y5U4 225 aa10.43□□□□□ -0.74
SCAMP4-207ENST00000472442 GOLT1AQ6ZVE7 132 aa10.43□□□□□ -0.74
SCAMP4-207ENST00000472442 TPPP3Q9BW30 176 aa10.43□□□□□ -0.74
SCAMP4-207ENST00000472442 A0A096LNJ9 63 aa10.42□□□□□ -0.74
SCAMP4-207ENST00000472442 A0A1W2PPI3 338 aa10.42□□□□□ -0.74
SCAMP4-207ENST00000472442 IFI27P40305 119 aaPredicted RBP10.42□□□□□ -0.74
SCAMP4-207ENST00000472442 LGALS7P47929 136 aa10.42□□□□□ -0.74
SCAMP4-207ENST00000472442 CLEC2AQ6UVW9 174 aa10.42□□□□□ -0.74
SCAMP4-207ENST00000472442 BOD1L2Q8IYS8 172 aa10.42□□□□□ -0.74
SCAMP4-207ENST00000472442 EXOC3-AS1Q8N2X6 119 aa10.42□□□□□ -0.74
SCAMP4-207ENST00000472442 OR1N2Q8NGR9 330 aa10.42□□□□□ -0.74
SCAMP4-207ENST00000472442 LOC389332A0A1B0GUA5 103 aa10.42□□□□□ -0.74
SCAMP4-207ENST00000472442 CRYGBP07316 175 aa10.42□□□□□ -0.74
SCAMP4-207ENST00000472442 APELAP0DMC3 54 aa10.42□□□□□ -0.74
SCAMP4-207ENST00000472442 VMA21Q3ZAQ7 101 aa10.42□□□□□ -0.74
SCAMP4-207ENST00000472442 NEGR1Q7Z3B1 354 aa10.42□□□□□ -0.74
SCAMP4-207ENST00000472442 ACACBO00763 2458 aa10.42□□□□□ -0.74
SCAMP4-207ENST00000472442 A1L4Q6 167 aa10.41□□□□□ -0.74
SCAMP4-207ENST00000472442 IGLV2-11P01706 119 aa10.41□□□□□ -0.74
SCAMP4-207ENST00000472442 FXYD7P58549 80 aa10.41□□□□□ -0.74
SCAMP4-207ENST00000472442 CACNG7P62955 275 aa10.41□□□□□ -0.74
SCAMP4-207ENST00000472442 HSD52Q0P140 79 aa10.41□□□□□ -0.74
SCAMP4-207ENST00000472442 RIGQ13278 110 aa10.41□□□□□ -0.74
SCAMP4-207ENST00000472442 CHTOPQ9Y3Y2 248 aaKnown RBP10.41□□□□□ -0.74
SCAMP4-207ENST00000472442 SPCS1Q9Y6A9 102 aa10.41□□□□□ -0.74
SCAMP4-207ENST00000472442 ZNF785A8K8V0 405 aa10.41□□□□□ -0.74
SCAMP4-207ENST00000472442 SMAD7O15105 426 aaKnown RBP10.41□□□□□ -0.74
SCAMP4-207ENST00000472442 C16orf54Q6UWD8 224 aa10.41□□□□□ -0.74
SCAMP4-207ENST00000472442 PRSS57Q6UWY2 283 aa10.41□□□□□ -0.74
SCAMP4-207ENST00000472442 IGFBPL1Q8WX77 278 aa10.41□□□□□ -0.74
SCAMP4-207ENST00000472442 DPF1Q92782 380 aa10.41□□□□□ -0.74
SCAMP4-207ENST00000472442 RPEQ96AT9 228 aa10.41□□□□□ -0.74
SCAMP4-207ENST00000472442 CIDEAO60543 219 aa10.4□□□□□ -0.74
SCAMP4-207ENST00000472442 ZFP36P26651 326 aaKnown RBP10.4□□□□□ -0.74
SCAMP4-207ENST00000472442 KLRD1Q13241 179 aa10.4□□□□□ -0.74
SCAMP4-207ENST00000472442 OR11H6Q8NGC7 330 aa10.4□□□□□ -0.74
SCAMP4-207ENST00000472442 A0A1W2PPM0 123 aa10.4□□□□□ -0.75
SCAMP4-207ENST00000472442 TM4SF20Q53R12 229 aa10.4□□□□□ -0.75
SCAMP4-207ENST00000472442 ADAMTSL5Q6ZMM2 481 aa10.4□□□□□ -0.75
SCAMP4-207ENST00000472442 TRGV9Q99603 122 aa10.4□□□□□ -0.75
SCAMP4-207ENST00000472442 NPFFR1Q9GZQ6 430 aa10.4□□□□□ -0.75
SCAMP4-207ENST00000472442 OTORQ9NRC9 128 aa10.4□□□□□ -0.75
SCAMP4-207ENST00000472442 SIGLEC9Q9Y336 463 aa10.4□□□□□ -0.75
SCAMP4-207ENST00000472442 M0R1W7 72 aa10.39□□□□□ -0.75
SCAMP4-207ENST00000472442 GOSR1O95249 250 aa10.39□□□□□ -0.75
SCAMP4-207ENST00000472442 CRYGCP07315 174 aa10.39□□□□□ -0.75
SCAMP4-207ENST00000472442 NMUP48645 174 aa10.39□□□□□ -0.75
SCAMP4-207ENST00000472442 LGALS9BQ3B8N2 356 aa10.39□□□□□ -0.75
SCAMP4-207ENST00000472442 LGALS9CQ6DKI2 356 aa10.39□□□□□ -0.75
SCAMP4-207ENST00000472442 PCP2Q8IVA1 136 aa10.39□□□□□ -0.75
SCAMP4-207ENST00000472442 OR9G4Q8NGQ1 327 aa10.39□□□□□ -0.75
SCAMP4-207ENST00000472442 SIGLEC8Q9NYZ4 499 aa10.39□□□□□ -0.75
SCAMP4-207ENST00000472442 F11RQ9Y624 299 aaKnown RBP10.39□□□□□ -0.75
SCAMP4-207ENST00000472442 D6R8Y8 96 aa10.38□□□□□ -0.75
SCAMP4-207ENST00000472442 PRTN3P24158 256 aa10.38□□□□□ -0.75
SCAMP4-207ENST00000472442 PLP1P60201 277 aa10.38□□□□□ -0.75
SCAMP4-207ENST00000472442 LYZP61626 148 aa10.38□□□□□ -0.75
SCAMP4-207ENST00000472442 OR5A1Q8NGJ0 315 aa10.38□□□□□ -0.75
SCAMP4-207ENST00000472442 AKAP6Q13023 2319 aa10.38□□□□□ -0.75
SCAMP4-207ENST00000472442 SERTM2A0A1B0GWG4 89 aa10.38□□□□□ -0.75
SCAMP4-207ENST00000472442 TIMM23O14925 209 aa10.38□□□□□ -0.75
SCAMP4-207ENST00000472442 EFNA4P52798 201 aa10.38□□□□□ -0.75
SCAMP4-207ENST00000472442 SPOCK3Q9BQ16 436 aa10.38□□□□□ -0.75
SCAMP4-207ENST00000472442 HIGD1AQ9Y241 93 aa10.38□□□□□ -0.75
SCAMP4-207ENST00000472442 ODF3BA8MYP8 253 aa10.38□□□□□ -0.75
SCAMP4-207ENST00000472442 GATD1Q8NB37 220 aa10.38□□□□□ -0.75
SCAMP4-207ENST00000472442 PPP1R27Q86WC6 154 aa10.37□□□□□ -0.75
SCAMP4-207ENST00000472442 OR4X2Q8NGF9 303 aa10.37□□□□□ -0.75
SCAMP4-207ENST00000472442 CFHR4Q92496 578 aa10.37□□□□□ -0.75
SCAMP4-207ENST00000472442 FBXL15Q9H469 300 aa10.37□□□□□ -0.75
SCAMP4-207ENST00000472442 DPM3Q9P2X0 92 aa10.37□□□□□ -0.75
SCAMP4-207ENST00000472442 FLNCQ14315 2725 aa10.37□□□□□ -0.75
SCAMP4-207ENST00000472442 A0A1W2PRD5 423 aa10.37□□□□□ -0.75
SCAMP4-207ENST00000472442 A0A1W2PRF3 423 aa10.37□□□□□ -0.75
SCAMP4-207ENST00000472442 A0A1W2PRM7 423 aa10.37□□□□□ -0.75
SCAMP4-207ENST00000472442 HOXB4P17483 251 aaPredicted RBP10.37□□□□□ -0.75
SCAMP4-207ENST00000472442 RPL24P83731 157 aaKnown RBP10.37□□□□□ -0.75
SCAMP4-207ENST00000472442 SPTAN1Q13813 2472 aaKnown RBP10.37□□□□□ -0.75
SCAMP4-207ENST00000472442 MED13LQ71F56 2210 aa10.36□□□□□ -0.75
SCAMP4-207ENST00000472442 GNG7O60262 68 aa10.36□□□□□ -0.75
SCAMP4-207ENST00000472442 FABP2P12104 132 aa10.36□□□□□ -0.75
SCAMP4-207ENST00000472442 SAMD13Q5VXD3 122 aa10.36□□□□□ -0.75
SCAMP4-207ENST00000472442 ZNF414Q96IQ9 312 aa10.36□□□□□ -0.75
SCAMP4-207ENST00000472442 TMEM213A2RRL7 107 aa10.36□□□□□ -0.75
SCAMP4-207ENST00000472442 TEX22C9J3V5 150 aa10.36□□□□□ -0.75
SCAMP4-207ENST00000472442 RPL27AP46776 148 aaKnown RBP10.36□□□□□ -0.75
SCAMP4-207ENST00000472442 PVRIGQ6DKI7 326 aa10.36□□□□□ -0.75
SCAMP4-207ENST00000472442 VMO1Q7Z5L0 202 aa10.36□□□□□ -0.75
SCAMP4-207ENST00000472442 AMN1Q8IY45 258 aa10.36□□□□□ -0.75
SCAMP4-207ENST00000472442 PRELID3AQ96N28 172 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 103.6 ms