RNA–Protein interactions for RNA: ENST00000471309.1

VPS52-216, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 505 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-216ENST00000471309 PSG3Q16557 428 aa7.14□□□□□ -1.27
VPS52-216ENST00000471309 TM4SF20Q53R12 229 aa7.14□□□□□ -1.27
VPS52-216ENST00000471309 KHDC1LQ5JSQ8 128 aa7.14□□□□□ -1.27
VPS52-216ENST00000471309 SAMD13Q5VXD3 122 aa7.14□□□□□ -1.27
VPS52-216ENST00000471309 BAGE2Q86Y30 109 aa7.14□□□□□ -1.27
VPS52-216ENST00000471309 AKAP9Q99996 3911 aa7.14□□□□□ -1.27
VPS52-216ENST00000471309 MLST8Q9BVC4 326 aa7.14□□□□□ -1.27
VPS52-216ENST00000471309 TRAV8-2A0A0B4J237 113 aa7.13□□□□□ -1.27
VPS52-216ENST00000471309 SOCS3O14543 225 aa7.13□□□□□ -1.27
VPS52-216ENST00000471309 MGST1P10620 155 aaKnown RBP7.13□□□□□ -1.27
VPS52-216ENST00000471309 SYNJ2BPP57105 145 aa7.13□□□□□ -1.27
VPS52-216ENST00000471309 FLI1Q01543 452 aaPredicted RBP7.13□□□□□ -1.27
VPS52-216ENST00000471309 KLF5Q13887 457 aaPredicted RBP7.13□□□□□ -1.27
VPS52-216ENST00000471309 ELOBQ15370 118 aa7.13□□□□□ -1.27
VPS52-216ENST00000471309 C18orf65Q6ZTR6 163 aa7.13□□□□□ -1.27
VPS52-216ENST00000471309 FAM231DQ6ZW35 169 aa7.13□□□□□ -1.27
VPS52-216ENST00000471309 KLHL30-AS1Q8NEE0 82 aa7.13□□□□□ -1.27
VPS52-216ENST00000471309 OR10G8Q8NGN5 311 aa7.13□□□□□ -1.27
VPS52-216ENST00000471309 IMMP2LQ96T52 175 aa7.13□□□□□ -1.27
VPS52-216ENST00000471309 NRN1Q9NPD7 142 aa7.13□□□□□ -1.27
VPS52-216ENST00000471309 BIN3Q9NQY0 253 aa7.13□□□□□ -1.27
VPS52-216ENST00000471309 OSTCQ9NRP0 149 aa7.13□□□□□ -1.27
VPS52-216ENST00000471309 NF1P21359 2839 aa7.12□□□□□ -1.27
VPS52-216ENST00000471309 TRAV8-1A0A0A6YYK1 113 aa7.12□□□□□ -1.27
VPS52-216ENST00000471309 RBAKDNA6NC62 111 aa7.12□□□□□ -1.27
VPS52-216ENST00000471309 CD28P10747 220 aa7.12□□□□□ -1.27
VPS52-216ENST00000471309 S100PP25815 95 aa7.12□□□□□ -1.27
VPS52-216ENST00000471309 PROK1P58294 105 aa7.12□□□□□ -1.27
VPS52-216ENST00000471309 ERVFC1-1P60608 527 aa7.12□□□□□ -1.27
VPS52-216ENST00000471309 FHL3Q13643 280 aa7.12□□□□□ -1.27
VPS52-216ENST00000471309 DEFB136Q30KP8 78 aa7.12□□□□□ -1.27
VPS52-216ENST00000471309 LCN12Q6JVE5 192 aa7.12□□□□□ -1.27
VPS52-216ENST00000471309 KCNIP4Q6PIL6 250 aa7.12□□□□□ -1.27
VPS52-216ENST00000471309 TMEM183AQ8IXX5 376 aa7.12□□□□□ -1.27
VPS52-216ENST00000471309 FAM24BQ8N5W8 94 aa7.12□□□□□ -1.27
VPS52-216ENST00000471309 NHLRC2Q8NBF2 726 aa7.12□□□□□ -1.27
VPS52-216ENST00000471309 OR11H1Q8NG94 326 aa7.12□□□□□ -1.27
VPS52-216ENST00000471309 OR1N2Q8NGR9 330 aa7.12□□□□□ -1.27
VPS52-216ENST00000471309 DPF1Q92782 380 aa7.12□□□□□ -1.27
VPS52-216ENST00000471309 ZNF492Q9P255 531 aa7.12□□□□□ -1.27
VPS52-216ENST00000471309 PSG8Q9UQ74 426 aa7.12□□□□□ -1.27
VPS52-216ENST00000471309 ZFP30Q9Y2G7 519 aa7.12□□□□□ -1.27
VPS52-216ENST00000471309 TSSC4Q9Y5U2 329 aaPredicted RBP7.12□□□□□ -1.27
VPS52-216ENST00000471309 MXRA5Q9NR99 2828 aa7.12□□□□□ -1.27
VPS52-216ENST00000471309 HIVEP1P15822 2718 aa7.12□□□□□ -1.27
VPS52-216ENST00000471309 MTORP42345 2549 aa7.11□□□□□ -1.27
VPS52-216ENST00000471309 TLN2Q9Y4G6 2542 aa7.11□□□□□ -1.27
VPS52-216ENST00000471309 ACANP16112 2415 aa7.11□□□□□ -1.27
VPS52-216ENST00000471309 TRBV24-1A0A075B6N3 115 aa7.11□□□□□ -1.27
VPS52-216ENST00000471309 IGKV2-40A0A087WW87 121 aaPredicted RBP7.11□□□□□ -1.27
VPS52-216ENST00000471309 C2orf70A6NJV1 201 aa7.11□□□□□ -1.27
VPS52-216ENST00000471309 M0QZ24 198 aa7.11□□□□□ -1.27
VPS52-216ENST00000471309 IGKV2D-40P01614 121 aaPredicted RBP7.11□□□□□ -1.27
VPS52-216ENST00000471309 PFN1P07737 140 aaKnown RBP7.11□□□□□ -1.27
VPS52-216ENST00000471309 EDN2P20800 178 aa7.11□□□□□ -1.27
VPS52-216ENST00000471309 CBLN1P23435 193 aa7.11□□□□□ -1.27
VPS52-216ENST00000471309 HLA-DMBP28068 263 aa7.11□□□□□ -1.27
VPS52-216ENST00000471309 SLURP1P55000 103 aa7.11□□□□□ -1.27
VPS52-216ENST00000471309 OR5I1Q13606 314 aa7.11□□□□□ -1.27
VPS52-216ENST00000471309 IBA57Q5T440 356 aaKnown RBP7.11□□□□□ -1.27
VPS52-216ENST00000471309 TCF24Q7RTU0 167 aa7.11□□□□□ -1.27
VPS52-216ENST00000471309 PRNTQ86SH4 94 aa7.11□□□□□ -1.27
VPS52-216ENST00000471309 RNF182Q8N6D2 247 aa7.11□□□□□ -1.27
VPS52-216ENST00000471309 C16orf92Q96LL3 132 aa7.11□□□□□ -1.27
VPS52-216ENST00000471309 SGK494Q96LW2 274 aa7.11□□□□□ -1.27
VPS52-216ENST00000471309 PEMTQ9UBM1 199 aa7.11□□□□□ -1.27
VPS52-216ENST00000471309 MLXQ9UH92 298 aa7.11□□□□□ -1.27
VPS52-216ENST00000471309 RNF114Q9Y508 228 aa7.11□□□□□ -1.27
VPS52-216ENST00000471309 URGCP-MRPS24S4R325 110 aa7.11□□□□□ -1.27
VPS52-216ENST00000471309 V9GYV3 84 aa7.11□□□□□ -1.27
VPS52-216ENST00000471309 SONP18583 2426 aaKnown RBP7.11□□□□□ -1.27
VPS52-216ENST00000471309 TRAV9-1A0A075B6T8 112 aa7.1□□□□□ -1.27
VPS52-216ENST00000471309 CXCL1P09341 107 aa7.1□□□□□ -1.27
VPS52-216ENST00000471309 FOLR2P14207 255 aa7.1□□□□□ -1.27
VPS52-216ENST00000471309 RAB5AP20339 215 aa7.1□□□□□ -1.27
VPS52-216ENST00000471309 FOXL1Q12952 345 aa7.1□□□□□ -1.27
VPS52-216ENST00000471309 IGFL4Q6B9Z1 124 aa7.1□□□□□ -1.27
VPS52-216ENST00000471309 COX8CQ7Z4L0 72 aa7.1□□□□□ -1.27
VPS52-216ENST00000471309 OR9G4Q8NGQ1 327 aa7.1□□□□□ -1.27
VPS52-216ENST00000471309 RAX2Q96IS3 184 aa7.1□□□□□ -1.27
VPS52-216ENST00000471309 BTF3L4Q96K17 158 aa7.1□□□□□ -1.27
VPS52-216ENST00000471309 CITED2Q99967 270 aaPredicted RBP7.1□□□□□ -1.27
VPS52-216ENST00000471309 PYGO2Q9BRQ0 406 aa7.1□□□□□ -1.27
VPS52-216ENST00000471309 RNASE7Q9H1E1 156 aaKnown RBP7.1□□□□□ -1.27
VPS52-216ENST00000471309 IL36BQ9NZH7 164 aa7.1□□□□□ -1.27
VPS52-216ENST00000471309 TMA7Q9Y2S6 64 aaKnown RBP7.1□□□□□ -1.27
VPS52-216ENST00000471309 HIVEP2P31629 2446 aa7.1□□□□□ -1.27
VPS52-216ENST00000471309 TGIF2-C20orf24A0A0A6YYL0 155 aa7.09□□□□□ -1.27
VPS52-216ENST00000471309 A0A1B0GUS0 222 aa7.09□□□□□ -1.27
VPS52-216ENST00000471309 C19orf71A6NCJ1 209 aa7.09□□□□□ -1.27
VPS52-216ENST00000471309 ZNF705FA8MVS1 300 aaPredicted RBP7.09□□□□□ -1.27
VPS52-216ENST00000471309 PRAC2D3DTV9 90 aa7.09□□□□□ -1.27
VPS52-216ENST00000471309 RPL11P62913 178 aaKnown RBP7.09□□□□□ -1.27
VPS52-216ENST00000471309 SAPCD1Q5SSQ6 148 aa7.09□□□□□ -1.27
VPS52-216ENST00000471309 PRR27Q6MZM9 219 aa7.09□□□□□ -1.27
VPS52-216ENST00000471309 GBGT1Q8N5D6 347 aa7.09□□□□□ -1.27
VPS52-216ENST00000471309 DCANP1Q8TF63 244 aa7.09□□□□□ -1.27
VPS52-216ENST00000471309 FAM210BQ96KR6 192 aa7.09□□□□□ -1.27
VPS52-216ENST00000471309 VGLL1Q99990 258 aa7.09□□□□□ -1.27
VPS52-216ENST00000471309 NDFIP1Q9BT67 221 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms