RNA–Protein interactions for RNA: ENST00000469550.6

HDAC3-205, Transcript of histone deacetylase 3, humanhuman

TSL 1 (best)

Gene HDAC3, Length 1,952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-205ENST00000469550 Q9H3A6 140 aa7.6□□□□□ -1.19
HDAC3-205ENST00000469550 OTORQ9NRC9 128 aa7.6□□□□□ -1.19
HDAC3-205ENST00000469550 MRPL36Q9P0J6 103 aaKnown RBP7.6□□□□□ -1.19
HDAC3-205ENST00000469550 TMEM238C9JI98 176 aa7.59□□□□□ -1.19
HDAC3-205ENST00000469550 G3V4G9 280 aa7.59□□□□□ -1.19
HDAC3-205ENST00000469550 SPRY3O43610 288 aa7.59□□□□□ -1.19
HDAC3-205ENST00000469550 ORM2P19652 201 aa7.59□□□□□ -1.19
HDAC3-205ENST00000469550 MEF2CQ06413 473 aaPredicted RBP7.59□□□□□ -1.19
HDAC3-205ENST00000469550 C11orf71Q6IPW1 123 aa7.59□□□□□ -1.19
HDAC3-205ENST00000469550 Q86TA4 180 aa7.59□□□□□ -1.19
HDAC3-205ENST00000469550 BOD1L2Q8IYS8 172 aa7.59□□□□□ -1.19
HDAC3-205ENST00000469550 C8orf31Q8N9H6 132 aa7.59□□□□□ -1.19
HDAC3-205ENST00000469550 TMEM116Q8NCL8 245 aa7.59□□□□□ -1.19
HDAC3-205ENST00000469550 OR9G4Q8NGQ1 327 aa7.59□□□□□ -1.19
HDAC3-205ENST00000469550 C8orf46Q8TAG6 207 aa7.59□□□□□ -1.19
HDAC3-205ENST00000469550 SGK494Q96LW2 274 aa7.59□□□□□ -1.19
HDAC3-205ENST00000469550 MEGF9Q9H1U4 602 aa7.59□□□□□ -1.19
HDAC3-205ENST00000469550 TMEM14CQ9P0S9 112 aa7.59□□□□□ -1.19
HDAC3-205ENST00000469550 TNCP24821 2201 aa7.59□□□□□ -1.19
HDAC3-205ENST00000469550 ABCA1O95477 2261 aa7.59□□□□□ -1.19
HDAC3-205ENST00000469550 K7EP34 96 aa7.59□□□□□ -1.2
HDAC3-205ENST00000469550 ZNF138P52744 262 aa7.59□□□□□ -1.2
HDAC3-205ENST00000469550 DSCR9P59020 149 aa7.59□□□□□ -1.2
HDAC3-205ENST00000469550 LGALS9BQ3B8N2 356 aa7.59□□□□□ -1.2
HDAC3-205ENST00000469550 TEX36Q5VZQ5 186 aa7.59□□□□□ -1.2
HDAC3-205ENST00000469550 Q6AWC8 147 aa7.59□□□□□ -1.2
HDAC3-205ENST00000469550 LGALS9CQ6DKI2 356 aa7.59□□□□□ -1.2
HDAC3-205ENST00000469550 ALKBH2Q6NS38 261 aa7.59□□□□□ -1.2
HDAC3-205ENST00000469550 DUX4L9Q6RFH8 374 aaPredicted RBP7.59□□□□□ -1.2
HDAC3-205ENST00000469550 OR1B1Q8NGR6 318 aa7.59□□□□□ -1.2
HDAC3-205ENST00000469550 AP1S3Q96PC3 154 aa7.59□□□□□ -1.2
HDAC3-205ENST00000469550 TMEM160Q9NX00 188 aa7.59□□□□□ -1.2
HDAC3-205ENST00000469550 CHTOPQ9Y3Y2 248 aaKnown RBP7.59□□□□□ -1.2
HDAC3-205ENST00000469550 TANC2Q9HCD6 1990 aa7.59□□□□□ -1.2
HDAC3-205ENST00000469550 CADP27708 2225 aa7.58□□□□□ -1.2
HDAC3-205ENST00000469550 IGLV2-23P01705 113 aa7.58□□□□□ -1.2
HDAC3-205ENST00000469550 IGLV2-11P01706 119 aa7.58□□□□□ -1.2
HDAC3-205ENST00000469550 HSD52Q0P140 79 aa7.58□□□□□ -1.2
HDAC3-205ENST00000469550 FAM201AQ5SY85 155 aa7.58□□□□□ -1.2
HDAC3-205ENST00000469550 FA2HQ7L5A8 372 aa7.58□□□□□ -1.2
HDAC3-205ENST00000469550 NEGR1Q7Z3B1 354 aa7.58□□□□□ -1.2
HDAC3-205ENST00000469550 LINC00311Q8N616 119 aa7.58□□□□□ -1.2
HDAC3-205ENST00000469550 MAPK1IP1LQ8NDC0 245 aa7.58□□□□□ -1.2
HDAC3-205ENST00000469550 TMEM186Q96B77 213 aa7.58□□□□□ -1.2
HDAC3-205ENST00000469550 CCL13Q99616 98 aa7.58□□□□□ -1.2
HDAC3-205ENST00000469550 COL6A5A8TX70 2615 aa7.58□□□□□ -1.2
HDAC3-205ENST00000469550 FBN1P35555 2871 aaKnown RBP7.58□□□□□ -1.2
HDAC3-205ENST00000469550 PPIAL4DF5H284 164 aa7.57□□□□□ -1.2
HDAC3-205ENST00000469550 NDUFS7O75251 213 aa7.57□□□□□ -1.2
HDAC3-205ENST00000469550 DYSFO75923 2080 aa7.57□□□□□ -1.2
HDAC3-205ENST00000469550 SMIM17P0DL12 118 aa7.57□□□□□ -1.2
HDAC3-205ENST00000469550 LOXL1Q08397 574 aaPredicted RBP7.57□□□□□ -1.2
HDAC3-205ENST00000469550 ATRQ13535 2644 aa7.57□□□□□ -1.2
HDAC3-205ENST00000469550 VMA21Q3ZAQ7 101 aa7.57□□□□□ -1.2
HDAC3-205ENST00000469550 PSMG4Q5JS54 123 aa7.57□□□□□ -1.2
HDAC3-205ENST00000469550 ZNF493Q6ZR52 646 aa7.57□□□□□ -1.2
HDAC3-205ENST00000469550 OR4X2Q8NGF9 303 aa7.57□□□□□ -1.2
HDAC3-205ENST00000469550 OR5A1Q8NGJ0 315 aa7.57□□□□□ -1.2
HDAC3-205ENST00000469550 PRSS3P2Q8NHM4 247 aa7.57□□□□□ -1.2
HDAC3-205ENST00000469550 MCRIP2Q9BUT9 160 aaKnown RBP7.57□□□□□ -1.2
HDAC3-205ENST00000469550 YAE1D1Q9NRH1 226 aa7.57□□□□□ -1.2
HDAC3-205ENST00000469550 RABAC1Q9UI14 185 aa7.57□□□□□ -1.2
HDAC3-205ENST00000469550 RPH3ALQ9UNE2 315 aa7.57□□□□□ -1.2
HDAC3-205ENST00000469550 SONP18583 2426 aaKnown RBP7.57□□□□□ -1.2
HDAC3-205ENST00000469550 A0A1W2PPI3 338 aa7.57□□□□□ -1.2
HDAC3-205ENST00000469550 SLC25A16P16260 332 aa7.57□□□□□ -1.2
HDAC3-205ENST00000469550 APOBEC3AP31941 199 aaPredicted RBP7.57□□□□□ -1.2
HDAC3-205ENST00000469550 TNFAIP6P98066 277 aaPredicted RBP7.57□□□□□ -1.2
HDAC3-205ENST00000469550 PRR31Q5SQ13 230 aa7.57□□□□□ -1.2
HDAC3-205ENST00000469550 TMEM108Q6UXF1 575 aa7.57□□□□□ -1.2
HDAC3-205ENST00000469550 FAM216BQ8N7L0 139 aa7.57□□□□□ -1.2
HDAC3-205ENST00000469550 NPFFR1Q9GZQ6 430 aa7.57□□□□□ -1.2
HDAC3-205ENST00000469550 ZNRD1Q9P1U0 126 aa7.57□□□□□ -1.2
HDAC3-205ENST00000469550 U3KQK5 164 aa7.57□□□□□ -1.2
HDAC3-205ENST00000469550 IGHV4-30-2A0A087WSY4 118 aa7.56□□□□□ -1.2
HDAC3-205ENST00000469550 ZNF785A8K8V0 405 aa7.56□□□□□ -1.2
HDAC3-205ENST00000469550 E7EQL1 145 aa7.56□□□□□ -1.2
HDAC3-205ENST00000469550 H0Y8G0 127 aa7.56□□□□□ -1.2
HDAC3-205ENST00000469550 SAP30O75446 220 aa7.56□□□□□ -1.2
HDAC3-205ENST00000469550 NCR2O95944 276 aa7.56□□□□□ -1.2
HDAC3-205ENST00000469550 IGHV3-48P01763 117 aa7.56□□□□□ -1.2
HDAC3-205ENST00000469550 CSN3P07498 182 aa7.56□□□□□ -1.2
HDAC3-205ENST00000469550 CD40P25942 277 aa7.56□□□□□ -1.2
HDAC3-205ENST00000469550 MC5RP33032 325 aa7.56□□□□□ -1.2
HDAC3-205ENST00000469550 LGALS7P47929 136 aa7.56□□□□□ -1.2
HDAC3-205ENST00000469550 FOXE3Q13461 319 aa7.56□□□□□ -1.2
HDAC3-205ENST00000469550 C10orf55Q5SWW7 151 aa7.56□□□□□ -1.2
HDAC3-205ENST00000469550 TMEM75Q8N9X5 138 aa7.56□□□□□ -1.2
HDAC3-205ENST00000469550 OR2K2Q8NGT1 345 aa7.56□□□□□ -1.2
HDAC3-205ENST00000469550 PIFOQ8TCI5 191 aa7.56□□□□□ -1.2
HDAC3-205ENST00000469550 PLCE1Q9P212 2302 aa7.56□□□□□ -1.2
HDAC3-205ENST00000469550 A0A096LNJ9 63 aa7.55□□□□□ -1.2
HDAC3-205ENST00000469550 A0A0G2JLM5 398 aa7.55□□□□□ -1.2
HDAC3-205ENST00000469550 CIDEAO60543 219 aa7.55□□□□□ -1.2
HDAC3-205ENST00000469550 IGHV1-46P01743 117 aa7.55□□□□□ -1.2
HDAC3-205ENST00000469550 ARMS2P0C7Q2 107 aa7.55□□□□□ -1.2
HDAC3-205ENST00000469550 MRGPRG-AS1Q2M3A8 158 aa7.55□□□□□ -1.2
HDAC3-205ENST00000469550 CLEC2AQ6UVW9 174 aa7.55□□□□□ -1.2
HDAC3-205ENST00000469550 ADAMTSL5Q6ZMM2 481 aa7.55□□□□□ -1.2
HDAC3-205ENST00000469550 DEFB108BQ8NET1 73 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms