RNA–Protein interactions for RNA: ENST00000463048.3

NUP43-205, Transcript of nucleoporin 43, humanhuman

TSL 3

Gene NUP43, Length 523 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-205ENST00000463048 SPATA25Q9BR10 227 aa14.87□□□□□ -0.03
NUP43-205ENST00000463048 CLEC5AQ9NY25 188 aa14.87□□□□□ -0.03
NUP43-205ENST00000463048 KIR2DL5BA0A0G2JN68 375 aa14.86□□□□□ -0.03
NUP43-205ENST00000463048 KIR2DL5BA0A0G2JPC4 375 aa14.86□□□□□ -0.03
NUP43-205ENST00000463048 STAG3L2P0CL84 134 aa14.86□□□□□ -0.03
NUP43-205ENST00000463048 STAG3L3P0CL85 134 aa14.86□□□□□ -0.03
NUP43-205ENST00000463048 C4BPBP20851 252 aa14.86□□□□□ -0.03
NUP43-205ENST00000463048 FGF8P55075 233 aaPredicted RBP14.86□□□□□ -0.03
NUP43-205ENST00000463048 PQLC2Q6ZP29 291 aa14.86□□□□□ -0.03
NUP43-205ENST00000463048 KIR2DL5AQ8N109 375 aa14.86□□□□□ -0.03
NUP43-205ENST00000463048 KIR2DL5BQ8NHK3 375 aa14.86□□□□□ -0.03
NUP43-205ENST00000463048 AAMDCQ9H7C9 122 aa14.86□□□□□ -0.03
NUP43-205ENST00000463048 COL7A1Q02388 2944 aa14.86□□□□□ -0.03
NUP43-205ENST00000463048 ZNF253O75346 499 aa14.85□□□□□ -0.03
NUP43-205ENST00000463048 SEC11BP0C7V7 166 aa14.85□□□□□ -0.03
NUP43-205ENST00000463048 CNN1P51911 297 aaKnown RBP14.85□□□□□ -0.03
NUP43-205ENST00000463048 PDE6HQ13956 83 aa14.85□□□□□ -0.03
NUP43-205ENST00000463048 OR8A1Q8NGG7 326 aa14.85□□□□□ -0.03
NUP43-205ENST00000463048 FAM213BQ8TBF2 198 aa14.85□□□□□ -0.03
NUP43-205ENST00000463048 RCHY1Q96PM5 261 aa14.85□□□□□ -0.03
NUP43-205ENST00000463048 SLC35B3Q9H1N7 401 aa14.85□□□□□ -0.03
NUP43-205ENST00000463048 BOLA1Q9Y3E2 137 aa14.85□□□□□ -0.03
NUP43-205ENST00000463048 CTXND1A0A1B0GTU2 59 aa14.84□□□□□ -0.03
NUP43-205ENST00000463048 GCHFRP30047 84 aa14.84□□□□□ -0.03
NUP43-205ENST00000463048 STOML3Q8TAV4 291 aa14.84□□□□□ -0.03
NUP43-205ENST00000463048 Q9H3A6 140 aa14.84□□□□□ -0.03
NUP43-205ENST00000463048 XCL2Q9UBD3 114 aa14.84□□□□□ -0.03
NUP43-205ENST00000463048 U3KQK5 164 aa14.84□□□□□ -0.03
NUP43-205ENST00000463048 NBEAL2Q6ZNJ1 2754 aa14.84□□□□□ -0.03
NUP43-205ENST00000463048 A0A1B0GV50 99 aa14.83□□□□□ -0.04
NUP43-205ENST00000463048 UBE2CO00762 179 aa14.83□□□□□ -0.04
NUP43-205ENST00000463048 DUSP14O95147 198 aaKnown RBP14.83□□□□□ -0.04
NUP43-205ENST00000463048 CXorf1O96002 111 aa14.83□□□□□ -0.04
NUP43-205ENST00000463048 MORN3Q6PF18 240 aaPredicted RBP14.83□□□□□ -0.04
NUP43-205ENST00000463048 SLC51BQ86UW2 128 aa14.83□□□□□ -0.04
NUP43-205ENST00000463048 TMPRSS5Q9H3S3 457 aa14.83□□□□□ -0.04
NUP43-205ENST00000463048 PPP1R14DQ9NXH3 145 aa14.83□□□□□ -0.04
NUP43-205ENST00000463048 RPH3ALQ9UNE2 315 aa14.83□□□□□ -0.04
NUP43-205ENST00000463048 MAP1LC3B2A6NCE7 125 aa14.82□□□□□ -0.04
NUP43-205ENST00000463048 SPRY2O43597 315 aa14.82□□□□□ -0.04
NUP43-205ENST00000463048 GIG44P09565 113 aaPredicted RBP14.82□□□□□ -0.04
NUP43-205ENST00000463048 OR10J6PQ8NGY7 276 aa14.82□□□□□ -0.04
NUP43-205ENST00000463048 OVOL2Q9BRP0 275 aa14.82□□□□□ -0.04
NUP43-205ENST00000463048 MAP1LC3BQ9GZQ8 125 aa14.82□□□□□ -0.04
NUP43-205ENST00000463048 IGKV2-40A0A087WW87 121 aaPredicted RBP14.81□□□□□ -0.04
NUP43-205ENST00000463048 IGKV2D-40P01614 121 aaPredicted RBP14.81□□□□□ -0.04
NUP43-205ENST00000463048 NUTF2P61970 127 aaKnown RBP14.81□□□□□ -0.04
NUP43-205ENST00000463048 ERCC8Q13216 396 aa14.81□□□□□ -0.04
NUP43-205ENST00000463048 Q6ZWC4 215 aa14.81□□□□□ -0.04
NUP43-205ENST00000463048 PRELID1Q9Y255 219 aa14.81□□□□□ -0.04
NUP43-205ENST00000463048 HUWE1Q7Z6Z7 4374 aaKnown RBP14.8□□□□□ -0.04
NUP43-205ENST00000463048 PGPA6NDG6 321 aa14.8□□□□□ -0.04
NUP43-205ENST00000463048 M0R2Z0 102 aa14.8□□□□□ -0.04
NUP43-205ENST00000463048 SPINK13Q1W4C9 94 aa14.8□□□□□ -0.04
NUP43-205ENST00000463048 RNF183Q96D59 192 aa14.8□□□□□ -0.04
NUP43-205ENST00000463048 UMAD1C9J7I0 102 aa14.79□□□□□ -0.04
NUP43-205ENST00000463048 UBE2G2P60604 165 aa14.79□□□□□ -0.04
NUP43-205ENST00000463048 AMTNQ6UX39 209 aa14.79□□□□□ -0.04
NUP43-205ENST00000463048 TENM3Q9P273 2699 aa14.78□□□□□ -0.04
NUP43-205ENST00000463048 IGHV3OR16-12A0A075B7B8 117 aa14.78□□□□□ -0.04
NUP43-205ENST00000463048 BOLA2-SMG1P6H3BVE0 249 aa14.78□□□□□ -0.04
NUP43-205ENST00000463048 J3KRW8 73 aa14.78□□□□□ -0.04
NUP43-205ENST00000463048 CSN1S1P47710 185 aa14.78□□□□□ -0.04
NUP43-205ENST00000463048 FAM74A1Q5RGS3 127 aa14.78□□□□□ -0.04
NUP43-205ENST00000463048 EIF5AL1Q6IS14 154 aaKnown RBP14.78□□□□□ -0.04
NUP43-205ENST00000463048 SFT2D1Q8WV19 159 aa14.78□□□□□ -0.04
NUP43-205ENST00000463048 MRPL53Q96EL3 112 aaKnown RBP14.78□□□□□ -0.04
NUP43-205ENST00000463048 OTORQ9NRC9 128 aa14.78□□□□□ -0.04
NUP43-205ENST00000463048 TMEM167BQ9NRX6 74 aa14.78□□□□□ -0.04
NUP43-205ENST00000463048 TRAV12-2A0A075B6T6 113 aa14.77□□□□□ -0.05
NUP43-205ENST00000463048 GNG5P63218 68 aa14.77□□□□□ -0.05
NUP43-205ENST00000463048 LYPD1Q8N2G4 141 aa14.77□□□□□ -0.05
NUP43-205ENST00000463048 OR11H2Q8NH07 326 aa14.77□□□□□ -0.05
NUP43-205ENST00000463048 CMTM2Q8TAZ6 248 aa14.77□□□□□ -0.05
NUP43-205ENST00000463048 SLC25A5P05141 298 aaKnown RBP14.76□□□□□ -0.05
NUP43-205ENST00000463048 CLUHP3Q96NS8 147 aa14.76□□□□□ -0.05
NUP43-205ENST00000463048 RARRES2Q99969 163 aa14.76□□□□□ -0.05
NUP43-205ENST00000463048 VGLL1Q99990 258 aa14.76□□□□□ -0.05
NUP43-205ENST00000463048 C1QTNF4Q9BXJ3 329 aa14.76□□□□□ -0.05
NUP43-205ENST00000463048 A8MTW9 85 aa14.75□□□□□ -0.05
NUP43-205ENST00000463048 NPIPB6E9PJ23 425 aa14.75□□□□□ -0.05
NUP43-205ENST00000463048 H2AFB1P0C5Y9 115 aa14.75□□□□□ -0.05
NUP43-205ENST00000463048 CT45A10P0DMU9 189 aa14.75□□□□□ -0.05
NUP43-205ENST00000463048 ALKAL2Q6UX46 152 aa14.75□□□□□ -0.05
NUP43-205ENST00000463048 AGPAT4-IT1Q9H0P7 198 aa14.75□□□□□ -0.05
NUP43-205ENST00000463048 TP53TG1Q9Y2A0 90 aa14.75□□□□□ -0.05
NUP43-205ENST00000463048 YTHDF2Q9Y5A9 579 aaKnown RBP14.75□□□□□ -0.05
NUP43-205ENST00000463048 SUMO1P63165 101 aaKnown RBP14.74□□□□□ -0.05
NUP43-205ENST00000463048 KIR3DS1Q14943 382 aa14.74□□□□□ -0.05
NUP43-205ENST00000463048 DPPA3Q6W0C5 159 aa14.74□□□□□ -0.05
NUP43-205ENST00000463048 CSNK1G2-AS1Q8NCQ2 148 aa14.74□□□□□ -0.05
NUP43-205ENST00000463048 SUN5Q8TC36 379 aa14.74□□□□□ -0.05
NUP43-205ENST00000463048 GGTLC3B5MD39 225 aa14.73□□□□□ -0.05
NUP43-205ENST00000463048 DIRC3C9JPN6 131 aa14.73□□□□□ -0.05
NUP43-205ENST00000463048 DEFB4AO15263 64 aa14.73□□□□□ -0.05
NUP43-205ENST00000463048 SULT1A2P50226 295 aa14.73□□□□□ -0.05
NUP43-205ENST00000463048 GOLT1AQ6ZVE7 132 aa14.73□□□□□ -0.05
NUP43-205ENST00000463048 Q8TAT8 98 aa14.73□□□□□ -0.05
NUP43-205ENST00000463048 RXFP4Q8TDU9 374 aa14.73□□□□□ -0.05
NUP43-205ENST00000463048 MBD3L1Q8WWY6 194 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms