RNA–Protein interactions for RNA: ENST00000452489.6

PTPA-223, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

TSL 1 (best) BASIC

Gene PTPA, Length 2,526 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-223ENST00000452489 C1orf210Q8IVY1 113 aa14.71□□□□□ -0.05
PTPA-223ENST00000452489 FBXL15Q9H469 300 aa14.71□□□□□ -0.05
PTPA-223ENST00000452489 GAGE2DQ9UEU5 116 aa14.71□□□□□ -0.05
PTPA-223ENST00000452489 H3BVH4 76 aa14.71□□□□□ -0.05
PTPA-223ENST00000452489 SPINK14Q6IE38 97 aa14.71□□□□□ -0.05
PTPA-223ENST00000452489 ANKRD29Q8N6D5 301 aa14.71□□□□□ -0.05
PTPA-223ENST00000452489 THBDP07204 575 aa14.7□□□□□ -0.06
PTPA-223ENST00000452489 Q0VFX4 171 aa14.7□□□□□ -0.06
PTPA-223ENST00000452489 ZNF71Q9NQZ8 489 aaPredicted RBP14.7□□□□□ -0.06
PTPA-223ENST00000452489 DNAJC13O75165 2243 aa14.7□□□□□ -0.06
PTPA-223ENST00000452489 SCGB2A1O75556 95 aa14.7□□□□□ -0.06
PTPA-223ENST00000452489 FAM159AQ6UWV7 190 aa14.7□□□□□ -0.06
PTPA-223ENST00000452489 RPEQ96AT9 228 aa14.7□□□□□ -0.06
PTPA-223ENST00000452489 C17orf77Q96MU5 243 aa14.7□□□□□ -0.06
PTPA-223ENST00000452489 YAE1D1Q9NRH1 226 aa14.7□□□□□ -0.06
PTPA-223ENST00000452489 NDUFA3O95167 84 aa14.69□□□□□ -0.06
PTPA-223ENST00000452489 PPP1R35Q8TAP8 253 aa14.69□□□□□ -0.06
PTPA-223ENST00000452489 MAP1LC3AQ9H492 121 aa14.69□□□□□ -0.06
PTPA-223ENST00000452489 TIMM8AO60220 97 aaPredicted RBP14.69□□□□□ -0.06
PTPA-223ENST00000452489 CGB3P0DN86 165 aa14.68□□□□□ -0.06
PTPA-223ENST00000452489 CGB7P0DN87 165 aa14.68□□□□□ -0.06
PTPA-223ENST00000452489 VCX2Q9H322 139 aa14.68□□□□□ -0.06
PTPA-223ENST00000452489 PPDPFQ9H3Y8 114 aa14.68□□□□□ -0.06
PTPA-223ENST00000452489 NCBP2LA6PVI3 153 aaKnown RBP14.68□□□□□ -0.06
PTPA-223ENST00000452489 IFITM1P13164 125 aa14.68□□□□□ -0.06
PTPA-223ENST00000452489 TTC32Q5I0X7 151 aa14.68□□□□□ -0.06
PTPA-223ENST00000452489 CFAP47Q6ZTR5 3102 aa14.68□□□□□ -0.06
PTPA-223ENST00000452489 ATP5LO75964 103 aa14.67□□□□□ -0.06
PTPA-223ENST00000452489 TCL1BO95988 128 aa14.67□□□□□ -0.06
PTPA-223ENST00000452489 HES7Q9BYE0 225 aa14.67□□□□□ -0.06
PTPA-223ENST00000452489 VPREB3Q9UKI3 123 aa14.67□□□□□ -0.06
PTPA-223ENST00000452489 HCP5Q6MZN7 132 aa14.67□□□□□ -0.06
PTPA-223ENST00000452489 DUX4L9Q6RFH8 374 aaPredicted RBP14.67□□□□□ -0.06
PTPA-223ENST00000452489 TMEM75Q8N9X5 138 aa14.67□□□□□ -0.06
PTPA-223ENST00000452489 SPRY4Q9C004 299 aa14.67□□□□□ -0.06
PTPA-223ENST00000452489 MSRB1Q9NZV6 116 aa14.67□□□□□ -0.06
PTPA-223ENST00000452489 PRR14LQ5THK1 2151 aa14.67□□□□□ -0.06
PTPA-223ENST00000452489 A8MWV9 139 aa14.66□□□□□ -0.06
PTPA-223ENST00000452489 SNCGO76070 127 aa14.66□□□□□ -0.06
PTPA-223ENST00000452489 GATA1P15976 413 aaPredicted RBP14.66□□□□□ -0.06
PTPA-223ENST00000452489 MYMXA0A1B0GTQ4 84 aa14.66□□□□□ -0.06
PTPA-223ENST00000452489 TMEM262E9PQX1 116 aa14.66□□□□□ -0.06
PTPA-223ENST00000452489 UBE2D3P61077 147 aa14.66□□□□□ -0.06
PTPA-223ENST00000452489 UBE2D2P62837 147 aa14.66□□□□□ -0.06
PTPA-223ENST00000452489 TRBV6-1A0A0K0K1D8 114 aa14.65□□□□□ -0.06
PTPA-223ENST00000452489 CENPVL3A0A0U1RRI6 287 aa14.65□□□□□ -0.06
PTPA-223ENST00000452489 APELAP0DMC3 54 aa14.65□□□□□ -0.06
PTPA-223ENST00000452489 LYZP61626 148 aa14.65□□□□□ -0.06
PTPA-223ENST00000452489 PROCRQ9UNN8 238 aa14.65□□□□□ -0.06
PTPA-223ENST00000452489 INTS1Q8N201 2190 aaKnown RBP14.65□□□□□ -0.06
PTPA-223ENST00000452489 PLXNB1O43157 2135 aa14.65□□□□□ -0.06
PTPA-223ENST00000452489 Q6ZQT7 251 aa14.65□□□□□ -0.06
PTPA-223ENST00000452489 C3orf56Q8N813 242 aa14.65□□□□□ -0.06
PTPA-223ENST00000452489 RNF185Q96GF1 192 aa14.65□□□□□ -0.06
PTPA-223ENST00000452489 RPUSD1Q9UJJ7 312 aaKnown RBP14.65□□□□□ -0.06
PTPA-223ENST00000452489 ZNF318Q5VUA4 2279 aa14.65□□□□□ -0.07
PTPA-223ENST00000452489 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa14.64□□□□□ -0.07
PTPA-223ENST00000452489 SUB1P53999 127 aaKnown RBP eCLIP14.64□□□□□ -0.07
PTPA-223ENST00000452489 MRPL20Q9BYC9 149 aaKnown RBP14.64□□□□□ -0.07
PTPA-223ENST00000452489 HIGD1AQ9Y241 93 aa14.64□□□□□ -0.07
PTPA-223ENST00000452489 M0R3E3 92 aa14.64□□□□□ -0.07
PTPA-223ENST00000452489 TNFRSF6BO95407 300 aa14.64□□□□□ -0.07
PTPA-223ENST00000452489 FAM201AQ5SY85 155 aa14.64□□□□□ -0.07
PTPA-223ENST00000452489 KIAA0100Q14667 2235 aaKnown RBP14.64□□□□□ -0.07
PTPA-223ENST00000452489 LINC01546A6NGU7 62 aa14.63□□□□□ -0.07
PTPA-223ENST00000452489 EPOPA6NHQ4 379 aa14.63□□□□□ -0.07
PTPA-223ENST00000452489 SH2D1AO60880 128 aa14.63□□□□□ -0.07
PTPA-223ENST00000452489 LYZL6O75951 148 aa14.63□□□□□ -0.07
PTPA-223ENST00000452489 TRGV9Q99603 122 aa14.63□□□□□ -0.07
PTPA-223ENST00000452489 SLC25A39Q9BZJ4 359 aaPredicted RBP14.63□□□□□ -0.07
PTPA-223ENST00000452489 TRAV8-2A0A0B4J237 113 aa14.63□□□□□ -0.07
PTPA-223ENST00000452489 M0QXV9 152 aa14.63□□□□□ -0.07
PTPA-223ENST00000452489 LGALS1P09382 135 aaKnown RBP14.63□□□□□ -0.07
PTPA-223ENST00000452489 SPRNQ5BIV9 151 aa14.63□□□□□ -0.07
PTPA-223ENST00000452489 PIP4P1Q86T03 277 aa14.63□□□□□ -0.07
PTPA-223ENST00000452489 PPP1R27Q86WC6 154 aa14.63□□□□□ -0.07
PTPA-223ENST00000452489 SRRM5B3KS81 715 aa14.62□□□□□ -0.07
PTPA-223ENST00000452489 SBSPONQ8IVN8 264 aa14.62□□□□□ -0.07
PTPA-223ENST00000452489 RAB9BQ9NP90 201 aa14.62□□□□□ -0.07
PTPA-223ENST00000452489 CTSZQ9UBR2 303 aa14.62□□□□□ -0.07
PTPA-223ENST00000452489 A0A1W2PPI3 338 aa14.62□□□□□ -0.07
PTPA-223ENST00000452489 INS-IGF2F8WCM5 200 aa14.62□□□□□ -0.07
PTPA-223ENST00000452489 ATP5J2P56134 94 aa14.62□□□□□ -0.07
PTPA-223ENST00000452489 MEIG1Q5JSS6 88 aa14.62□□□□□ -0.07
PTPA-223ENST00000452489 UBE2D1P51668 147 aa14.61□□□□□ -0.07
PTPA-223ENST00000452489 NXT2Q9NPJ8 142 aaKnown RBP14.61□□□□□ -0.07
PTPA-223ENST00000452489 LINC01619G3V211 115 aa14.61□□□□□ -0.07
PTPA-223ENST00000452489 J3KRW8 73 aa14.61□□□□□ -0.07
PTPA-223ENST00000452489 TPSG1Q9NRR2 321 aa14.61□□□□□ -0.07
PTPA-223ENST00000452489 ABCA1O95477 2261 aa14.61□□□□□ -0.07
PTPA-223ENST00000452489 FOLR3P41439 243 aa14.6□□□□□ -0.07
PTPA-223ENST00000452489 RASL11BQ9BPW5 248 aa14.6□□□□□ -0.07
PTPA-223ENST00000452489 TRBV19A0A075B6N1 114 aa14.6□□□□□ -0.07
PTPA-223ENST00000452489 SIGLEC15Q6ZMC9 328 aa14.6□□□□□ -0.07
PTPA-223ENST00000452489 FCN3O75636 299 aa14.59□□□□□ -0.07
PTPA-223ENST00000452489 CCL4P13236 92 aa14.59□□□□□ -0.07
PTPA-223ENST00000452489 EFNA4P52798 201 aa14.59□□□□□ -0.07
PTPA-223ENST00000452489 TMEM78Q5T7P6 136 aa14.59□□□□□ -0.07
PTPA-223ENST00000452489 EGR2P11161 476 aaPredicted RBP14.59□□□□□ -0.07
PTPA-223ENST00000452489 TMEM14CQ9P0S9 112 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 166.6 ms