RNA–Protein interactions for RNA: ENST00000442054.5

CDC42BPA-208, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-208ENST00000442054 RHOBP62745 196 aa5.74□□□□□ -1.49
CDC42BPA-208ENST00000442054 TMEM177Q53S58 311 aa5.74□□□□□ -1.49
CDC42BPA-208ENST00000442054 OR10J3Q5JRS4 329 aa5.74□□□□□ -1.49
CDC42BPA-208ENST00000442054 ETFRF1Q6IPR1 90 aa5.74□□□□□ -1.49
CDC42BPA-208ENST00000442054 ZMAT4Q9H898 229 aa5.74□□□□□ -1.49
CDC42BPA-208ENST00000442054 KLF12Q9Y4X4 402 aa5.74□□□□□ -1.49
CDC42BPA-208ENST00000442054 A0A1W2PRE2 83 aa5.74□□□□□ -1.49
CDC42BPA-208ENST00000442054 A0A1W2PS18 150 aa5.74□□□□□ -1.49
CDC42BPA-208ENST00000442054 CENPWQ5EE01 88 aa5.74□□□□□ -1.49
CDC42BPA-208ENST00000442054 C10orf99Q6UWK7 81 aa5.74□□□□□ -1.49
CDC42BPA-208ENST00000442054 Q6ZS46 218 aa5.74□□□□□ -1.49
CDC42BPA-208ENST00000442054 OR4A5Q8NH83 315 aa5.74□□□□□ -1.49
CDC42BPA-208ENST00000442054 HSPB9Q9BQS6 159 aa5.74□□□□□ -1.49
CDC42BPA-208ENST00000442054 C21orf62Q9NYP8 219 aa5.74□□□□□ -1.49
CDC42BPA-208ENST00000442054 FSHBP01225 129 aa5.73□□□□□ -1.49
CDC42BPA-208ENST00000442054 CLEC3BP05452 202 aa5.73□□□□□ -1.49
CDC42BPA-208ENST00000442054 MFAP2P55001 183 aa5.73□□□□□ -1.49
CDC42BPA-208ENST00000442054 WT1-ASQ06250 92 aa5.73□□□□□ -1.49
CDC42BPA-208ENST00000442054 CST9LP1Q5W188 147 aa5.73□□□□□ -1.49
CDC42BPA-208ENST00000442054 SPATA12Q7Z6I5 190 aa5.73□□□□□ -1.49
CDC42BPA-208ENST00000442054 FXYD5Q96DB9 178 aa5.73□□□□□ -1.49
CDC42BPA-208ENST00000442054 PLXNB1O43157 2135 aa5.73□□□□□ -1.49
CDC42BPA-208ENST00000442054 KLF5Q13887 457 aaPredicted RBP5.73□□□□□ -1.49
CDC42BPA-208ENST00000442054 OR10W1Q8NGF6 305 aa5.73□□□□□ -1.49
CDC42BPA-208ENST00000442054 TMEM208Q9BTX3 173 aa5.73□□□□□ -1.49
CDC42BPA-208ENST00000442054 RNASE7Q9H1E1 156 aaKnown RBP5.73□□□□□ -1.49
CDC42BPA-208ENST00000442054 TECRQ9NZ01 308 aaKnown RBP5.73□□□□□ -1.49
CDC42BPA-208ENST00000442054 GATA2P23769 480 aaPredicted RBP5.73□□□□□ -1.49
CDC42BPA-208ENST00000442054 GAGE1Q13065 139 aa5.73□□□□□ -1.49
CDC42BPA-208ENST00000442054 RITA1Q96K30 269 aa5.73□□□□□ -1.49
CDC42BPA-208ENST00000442054 IGHV7-81A0A0B4J1V7 117 aa5.72□□□□□ -1.49
CDC42BPA-208ENST00000442054 A0A1W2PPV4 95 aa5.72□□□□□ -1.49
CDC42BPA-208ENST00000442054 CRYBB3P26998 211 aa5.72□□□□□ -1.49
CDC42BPA-208ENST00000442054 KRTAP21-3Q3LHN1 58 aa5.72□□□□□ -1.49
CDC42BPA-208ENST00000442054 STXBP6Q8NFX7 210 aa5.72□□□□□ -1.49
CDC42BPA-208ENST00000442054 CMTM2Q8TAZ6 248 aa5.72□□□□□ -1.49
CDC42BPA-208ENST00000442054 MIEN1Q9BRT3 115 aa5.72□□□□□ -1.49
CDC42BPA-208ENST00000442054 KLK15Q9H2R5 256 aa5.72□□□□□ -1.49
CDC42BPA-208ENST00000442054 CR1P17927 2039 aa5.72□□□□□ -1.49
CDC42BPA-208ENST00000442054 LINC01548A6NM66 108 aa5.72□□□□□ -1.49
CDC42BPA-208ENST00000442054 APOHP02749 345 aaPredicted RBP5.72□□□□□ -1.49
CDC42BPA-208ENST00000442054 SLAQ13239 276 aa5.72□□□□□ -1.49
CDC42BPA-208ENST00000442054 OR5B3Q8NH48 314 aa5.72□□□□□ -1.49
CDC42BPA-208ENST00000442054 UBE2E2Q96LR5 201 aa5.72□□□□□ -1.49
CDC42BPA-208ENST00000442054 ATG101Q9BSB4 218 aa5.72□□□□□ -1.49
CDC42BPA-208ENST00000442054 C16orf95Q9H693 158 aa5.72□□□□□ -1.49
CDC42BPA-208ENST00000442054 TRAV5A0A0B4J249 113 aa5.72□□□□□ -1.49
CDC42BPA-208ENST00000442054 OR2T8A6NH00 312 aa5.72□□□□□ -1.49
CDC42BPA-208ENST00000442054 CORTO00230 105 aa5.72□□□□□ -1.49
CDC42BPA-208ENST00000442054 NDUFB8O95169 186 aa5.72□□□□□ -1.49
CDC42BPA-208ENST00000442054 SLURP1P55000 103 aa5.72□□□□□ -1.49
CDC42BPA-208ENST00000442054 ASPHD1Q5U4P2 390 aa5.72□□□□□ -1.49
CDC42BPA-208ENST00000442054 LINC00322Q6ZN03 302 aaPredicted RBP5.72□□□□□ -1.49
CDC42BPA-208ENST00000442054 ZNF575Q86XF7 245 aa5.72□□□□□ -1.49
CDC42BPA-208ENST00000442054 TMEM167AQ8TBQ9 72 aa5.72□□□□□ -1.49
CDC42BPA-208ENST00000442054 UHRF2Q96PU4 802 aa5.72□□□□□ -1.49
CDC42BPA-208ENST00000442054 ASCL2Q99929 193 aa5.72□□□□□ -1.49
CDC42BPA-208ENST00000442054 TPSG1Q9NRR2 321 aa5.72□□□□□ -1.49
CDC42BPA-208ENST00000442054 ZANQ9Y493 2812 aa5.71□□□□□ -1.49
CDC42BPA-208ENST00000442054 C19orf71A6NCJ1 209 aa5.71□□□□□ -1.49
CDC42BPA-208ENST00000442054 SAPCD1Q5SSQ6 148 aa5.71□□□□□ -1.49
CDC42BPA-208ENST00000442054 RASL11AQ6T310 242 aa5.71□□□□□ -1.49
CDC42BPA-208ENST00000442054 PQLC2Q6ZP29 291 aa5.71□□□□□ -1.49
CDC42BPA-208ENST00000442054 CACNG8Q8WXS5 425 aa5.71□□□□□ -1.49
CDC42BPA-208ENST00000442054 ZNF414Q96IQ9 312 aa5.71□□□□□ -1.49
CDC42BPA-208ENST00000442054 LINC00479Q96M42 142 aa5.71□□□□□ -1.49
CDC42BPA-208ENST00000442054 PRR25Q96S07 402 aa5.71□□□□□ -1.49
CDC42BPA-208ENST00000442054 METTL26Q96S19 204 aa5.71□□□□□ -1.49
CDC42BPA-208ENST00000442054 SERTAD4Q9NUC0 356 aa5.71□□□□□ -1.49
CDC42BPA-208ENST00000442054 SMAD5-AS1Q9Y6J3 95 aa5.71□□□□□ -1.49
CDC42BPA-208ENST00000442054 NPIPB6E9PJ23 425 aa5.71□□□□□ -1.5
CDC42BPA-208ENST00000442054 LGALS1P09382 135 aaKnown RBP5.71□□□□□ -1.5
CDC42BPA-208ENST00000442054 RBX1P62877 108 aa5.71□□□□□ -1.5
CDC42BPA-208ENST00000442054 LCN12Q6JVE5 192 aa5.71□□□□□ -1.5
CDC42BPA-208ENST00000442054 OR8I2Q8N0Y5 310 aa5.71□□□□□ -1.5
CDC42BPA-208ENST00000442054 TSKUQ8WUA8 353 aa5.71□□□□□ -1.5
CDC42BPA-208ENST00000442054 MRPL32Q9BYC8 188 aaKnown RBP5.71□□□□□ -1.5
CDC42BPA-208ENST00000442054 TMEM167BQ9NRX6 74 aa5.71□□□□□ -1.5
CDC42BPA-208ENST00000442054 UFC1Q9Y3C8 167 aa5.71□□□□□ -1.5
CDC42BPA-208ENST00000442054 HELTA6NFD8 242 aa5.71□□□□□ -1.5
CDC42BPA-208ENST00000442054 C2orf70A6NJV1 201 aa5.71□□□□□ -1.5
CDC42BPA-208ENST00000442054 CRXO43186 299 aaPredicted RBP5.71□□□□□ -1.5
CDC42BPA-208ENST00000442054 IGLV2-11P01706 119 aa5.71□□□□□ -1.5
CDC42BPA-208ENST00000442054 LYZP61626 148 aa5.71□□□□□ -1.5
CDC42BPA-208ENST00000442054 LDLRAD2Q5SZI1 272 aa5.71□□□□□ -1.5
CDC42BPA-208ENST00000442054 C18orf32Q8TCD1 76 aa5.71□□□□□ -1.5
CDC42BPA-208ENST00000442054 KCNS1Q96KK3 526 aa5.71□□□□□ -1.5
CDC42BPA-208ENST00000442054 ZNF705GA8MUZ8 300 aaPredicted RBP5.7□□□□□ -1.5
CDC42BPA-208ENST00000442054 CRISP2P16562 243 aa5.7□□□□□ -1.5
CDC42BPA-208ENST00000442054 GATD1Q8NB37 220 aa5.7□□□□□ -1.5
CDC42BPA-208ENST00000442054 MRPL27Q9P0M9 148 aaKnown RBP5.7□□□□□ -1.5
CDC42BPA-208ENST00000442054 IGLC7A0M8Q6 106 aa5.7□□□□□ -1.5
CDC42BPA-208ENST00000442054 IZUMO1RA6ND01 250 aa5.7□□□□□ -1.5
CDC42BPA-208ENST00000442054 FAM223BA6NKX1 122 aa5.7□□□□□ -1.5
CDC42BPA-208ENST00000442054 TCAPO15273 167 aa5.7□□□□□ -1.5
CDC42BPA-208ENST00000442054 GP9P14770 177 aa5.7□□□□□ -1.5
CDC42BPA-208ENST00000442054 PLP1P60201 277 aa5.7□□□□□ -1.5
CDC42BPA-208ENST00000442054 FAM223AQ8IWN6 122 aa5.7□□□□□ -1.5
CDC42BPA-208ENST00000442054 IGHV3-66A0A0C4DH42 116 aa5.7□□□□□ -1.5
CDC42BPA-208ENST00000442054 MT-CO2P00403 227 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms