RNA–Protein interactions for RNA: ENST00000441756.1

MCF2L-217, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 370 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-217ENST00000441756 SEC11CQ9BY50 192 aa11.99□□□□□ -0.49
MCF2L-217ENST00000441756 RPH3ALQ9UNE2 315 aa11.99□□□□□ -0.49
MCF2L-217ENST00000441756 SOCS3O14543 225 aa11.98□□□□□ -0.49
MCF2L-217ENST00000441756 TCRAP04437 139 aa11.98□□□□□ -0.49
MCF2L-217ENST00000441756 CD33P20138 364 aa11.98□□□□□ -0.49
MCF2L-217ENST00000441756 S100A1P23297 94 aa11.98□□□□□ -0.49
MCF2L-217ENST00000441756 UBE2G1P62253 170 aa11.98□□□□□ -0.49
MCF2L-217ENST00000441756 PSG3Q16557 428 aa11.98□□□□□ -0.49
MCF2L-217ENST00000441756 C9orf66Q5T8R8 295 aa11.98□□□□□ -0.49
MCF2L-217ENST00000441756 LCN12Q6JVE5 192 aa11.98□□□□□ -0.49
MCF2L-217ENST00000441756 TMEM61Q8N0U2 210 aa11.98□□□□□ -0.49
MCF2L-217ENST00000441756 GBGT1Q8N5D6 347 aa11.98□□□□□ -0.49
MCF2L-217ENST00000441756 DCANP1Q8TF63 244 aa11.98□□□□□ -0.49
MCF2L-217ENST00000441756 SMIM7Q9BQ49 75 aa11.98□□□□□ -0.49
MCF2L-217ENST00000441756 PARLQ9H300 379 aa11.98□□□□□ -0.49
MCF2L-217ENST00000441756 K7EQG2 157 aa11.97□□□□□ -0.49
MCF2L-217ENST00000441756 CD300EQ496F6 205 aaPredicted RBP11.97□□□□□ -0.49
MCF2L-217ENST00000441756 ZNF738Q8NE65 137 aa11.97□□□□□ -0.49
MCF2L-217ENST00000441756 C2CD4CQ8TF44 421 aa11.97□□□□□ -0.49
MCF2L-217ENST00000441756 FMC1Q96HJ9 113 aa11.97□□□□□ -0.49
MCF2L-217ENST00000441756 NIPSNAP3BQ9BS92 247 aa11.97□□□□□ -0.49
MCF2L-217ENST00000441756 GPR61Q9BZJ8 451 aa11.97□□□□□ -0.49
MCF2L-217ENST00000441756 TRAV8-2A0A0B4J237 113 aa11.96□□□□□ -0.49
MCF2L-217ENST00000441756 RBAKDNA6NC62 111 aa11.96□□□□□ -0.49
MCF2L-217ENST00000441756 ZNF727A8MUV8 499 aa11.96□□□□□ -0.49
MCF2L-217ENST00000441756 DIRC3C9JPN6 131 aa11.96□□□□□ -0.49
MCF2L-217ENST00000441756 M0R3E3 92 aa11.96□□□□□ -0.49
MCF2L-217ENST00000441756 IGLV1-51P01701 117 aa11.96□□□□□ -0.49
MCF2L-217ENST00000441756 TFPI2P48307 235 aa11.96□□□□□ -0.49
MCF2L-217ENST00000441756 TAS2R60P59551 318 aa11.96□□□□□ -0.49
MCF2L-217ENST00000441756 GNG5P63218 68 aa11.96□□□□□ -0.49
MCF2L-217ENST00000441756 ZNF674Q2M3X9 581 aa11.96□□□□□ -0.49
MCF2L-217ENST00000441756 GOLT1AQ6ZVE7 132 aa11.96□□□□□ -0.49
MCF2L-217ENST00000441756 WFDC3Q8IUB2 231 aa11.96□□□□□ -0.49
MCF2L-217ENST00000441756 RNF182Q8N6D2 247 aa11.96□□□□□ -0.49
MCF2L-217ENST00000441756 RPL35P42766 123 aaKnown RBP11.95□□□□□ -0.5
MCF2L-217ENST00000441756 KRTAP21-3Q3LHN1 58 aa11.95□□□□□ -0.5
MCF2L-217ENST00000441756 TMEM75Q8N9X5 138 aa11.95□□□□□ -0.5
MCF2L-217ENST00000441756 CARHSP1Q9Y2V2 147 aaKnown RBP11.95□□□□□ -0.5
MCF2L-217ENST00000441756 SELENOKQ9Y6D0 94 aa11.95□□□□□ -0.5
MCF2L-217ENST00000441756 ATRQ13535 2644 aa11.94□□□□□ -0.5
MCF2L-217ENST00000441756 C9JCJ5 164 aa11.94□□□□□ -0.5
MCF2L-217ENST00000441756 CMC4P56277 68 aaPredicted RBP11.94□□□□□ -0.5
MCF2L-217ENST00000441756 GUCA2BQ16661 112 aa11.94□□□□□ -0.5
MCF2L-217ENST00000441756 TMEM183BQ1AE95 376 aa11.94□□□□□ -0.5
MCF2L-217ENST00000441756 C10orf91Q5T1B1 145 aa11.94□□□□□ -0.5
MCF2L-217ENST00000441756 IGFL4Q6B9Z1 124 aa11.94□□□□□ -0.5
MCF2L-217ENST00000441756 WFDC9Q8NEX5 89 aa11.94□□□□□ -0.5
MCF2L-217ENST00000441756 OR10J6PQ8NGY7 276 aa11.94□□□□□ -0.5
MCF2L-217ENST00000441756 LINC00052Q96N35 136 aa11.94□□□□□ -0.5
MCF2L-217ENST00000441756 KLF12Q9Y4X4 402 aa11.94□□□□□ -0.5
MCF2L-217ENST00000441756 TRBV6-1A0A0K0K1D8 114 aa11.93□□□□□ -0.5
MCF2L-217ENST00000441756 ZNF688P0C7X2 276 aa11.93□□□□□ -0.5
MCF2L-217ENST00000441756 HLA-DMBP28068 263 aa11.93□□□□□ -0.5
MCF2L-217ENST00000441756 GNG4P50150 75 aa11.93□□□□□ -0.5
MCF2L-217ENST00000441756 PNRC1Q12796 327 aaPredicted RBP11.93□□□□□ -0.5
MCF2L-217ENST00000441756 PSMG4Q5JS54 123 aa11.93□□□□□ -0.5
MCF2L-217ENST00000441756 SMIM12Q96EX1 92 aa11.93□□□□□ -0.5
MCF2L-217ENST00000441756 DERL1Q9BUN8 251 aa11.93□□□□□ -0.5
MCF2L-217ENST00000441756 NAT8Q9UHE5 227 aa11.93□□□□□ -0.5
MCF2L-217ENST00000441756 ADCYAP1P18509 176 aa11.92□□□□□ -0.5
MCF2L-217ENST00000441756 FLI1Q01543 452 aaPredicted RBP11.92□□□□□ -0.5
MCF2L-217ENST00000441756 TMEM241Q24JQ0 296 aa11.92□□□□□ -0.5
MCF2L-217ENST00000441756 SVBPQ8N300 66 aa11.92□□□□□ -0.5
MCF2L-217ENST00000441756 NDFIP1Q9BT67 221 aa11.92□□□□□ -0.5
MCF2L-217ENST00000441756 LY96Q9Y6Y9 160 aa11.92□□□□□ -0.5
MCF2L-217ENST00000441756 IGKV2-40A0A087WW87 121 aaPredicted RBP11.91□□□□□ -0.5
MCF2L-217ENST00000441756 ZNF705FA8MVS1 300 aaPredicted RBP11.91□□□□□ -0.5
MCF2L-217ENST00000441756 IGKV2D-40P01614 121 aaPredicted RBP11.91□□□□□ -0.5
MCF2L-217ENST00000441756 APOC3P02656 99 aa11.91□□□□□ -0.5
MCF2L-217ENST00000441756 CENPWQ5EE01 88 aa11.91□□□□□ -0.5
MCF2L-217ENST00000441756 TMEM78Q5T7P6 136 aa11.91□□□□□ -0.5
MCF2L-217ENST00000441756 EBLN2Q6P2I7 272 aa11.91□□□□□ -0.5
MCF2L-217ENST00000441756 Q86TA4 180 aa11.91□□□□□ -0.5
MCF2L-217ENST00000441756 TVP23CQ96ET8 276 aa11.91□□□□□ -0.5
MCF2L-217ENST00000441756 C20orf173Q96LM9 149 aa11.91□□□□□ -0.5
MCF2L-217ENST00000441756 ZFP30Q9Y2G7 519 aa11.91□□□□□ -0.5
MCF2L-217ENST00000441756 BIN3Q9NQY0 253 aa11.9□□□□□ -0.5
MCF2L-217ENST00000441756 PSG8Q9UQ74 426 aa11.9□□□□□ -0.5
MCF2L-217ENST00000441756 TRAV34A0A0B4J273 112 aa11.89□□□□□ -0.51
MCF2L-217ENST00000441756 IZUMO1RA6ND01 250 aa11.89□□□□□ -0.51
MCF2L-217ENST00000441756 NPIPB6E9PJ23 425 aa11.89□□□□□ -0.51
MCF2L-217ENST00000441756 DUSP14O95147 198 aaKnown RBP11.89□□□□□ -0.51
MCF2L-217ENST00000441756 SNAPINO95295 136 aa11.89□□□□□ -0.51
MCF2L-217ENST00000441756 PRR31Q5SQ13 230 aa11.89□□□□□ -0.51
MCF2L-217ENST00000441756 SAPCD1Q5SSQ6 148 aa11.89□□□□□ -0.51
MCF2L-217ENST00000441756 FOXI2Q6ZQN5 318 aa11.89□□□□□ -0.51
MCF2L-217ENST00000441756 C9orf47Q6ZRZ4 202 aa11.89□□□□□ -0.51
MCF2L-217ENST00000441756 PRNTQ86SH4 94 aa11.89□□□□□ -0.51
MCF2L-217ENST00000441756 BAGE2Q86Y30 109 aa11.89□□□□□ -0.51
MCF2L-217ENST00000441756 OR8A1Q8NGG7 326 aa11.89□□□□□ -0.51
MCF2L-217ENST00000441756 IGF2BP2-AS1Q96M15 143 aa11.89□□□□□ -0.51
MCF2L-217ENST00000441756 LINC00477Q96M19 166 aa11.89□□□□□ -0.51
MCF2L-217ENST00000441756 LINC00479Q96M42 142 aa11.89□□□□□ -0.51
MCF2L-217ENST00000441756 FAM110AQ9BQ89 295 aa11.89□□□□□ -0.51
MCF2L-217ENST00000441756 SDF2L1Q9HCN8 221 aa11.89□□□□□ -0.51
MCF2L-217ENST00000441756 ZNF256Q9Y2P7 627 aaPredicted RBP11.89□□□□□ -0.51
MCF2L-217ENST00000441756 LENEPQ9Y5L5 61 aa11.89□□□□□ -0.51
MCF2L-217ENST00000441756 TRAV8-1A0A0A6YYK1 113 aa11.88□□□□□ -0.51
MCF2L-217ENST00000441756 PRAC2D3DTV9 90 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms