RNA–Protein interactions for RNA: ENST00000421670.3

DDX55-203, Transcript of DEAD-box helicase 55, humanhuman

TSL 1 (best) BASIC

Gene DDX55, Length 1,574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-203ENST00000421670 RPUSD4Q96CM3 377 aaKnown RBP11.64□□□□□ -0.55
DDX55-203ENST00000421670 OTORQ9NRC9 128 aa11.64□□□□□ -0.55
DDX55-203ENST00000421670 GNG13Q9P2W3 67 aa11.64□□□□□ -0.55
DDX55-203ENST00000421670 PGPA6NDG6 321 aa11.63□□□□□ -0.55
DDX55-203ENST00000421670 PAGE4O60829 102 aa11.63□□□□□ -0.55
DDX55-203ENST00000421670 NMBP08949 121 aa11.63□□□□□ -0.55
DDX55-203ENST00000421670 ZNF705DP0CH99 300 aaPredicted RBP11.63□□□□□ -0.55
DDX55-203ENST00000421670 ZNF705BP0CI00 300 aaPredicted RBP11.63□□□□□ -0.55
DDX55-203ENST00000421670 ACTL10Q5JWF8 245 aa11.63□□□□□ -0.55
DDX55-203ENST00000421670 RPH3ALQ9UNE2 315 aa11.63□□□□□ -0.55
DDX55-203ENST00000421670 A0A1W2PRE2 83 aa11.62□□□□□ -0.55
DDX55-203ENST00000421670 K7EIL1 84 aa11.62□□□□□ -0.55
DDX55-203ENST00000421670 CMC4P56277 68 aaPredicted RBP11.62□□□□□ -0.55
DDX55-203ENST00000421670 GNG5P63218 68 aa11.62□□□□□ -0.55
DDX55-203ENST00000421670 LYPD6BQ8NI32 183 aa11.62□□□□□ -0.55
DDX55-203ENST00000421670 SAV1Q9H4B6 383 aaPredicted RBP11.62□□□□□ -0.55
DDX55-203ENST00000421670 SRD5A3Q9H8P0 318 aa11.62□□□□□ -0.55
DDX55-203ENST00000421670 CLEC5AQ9NY25 188 aa11.62□□□□□ -0.55
DDX55-203ENST00000421670 SLC25A5P05141 298 aaKnown RBP11.62□□□□□ -0.55
DDX55-203ENST00000421670 IGHV4-30-4P0DP06 118 aa11.62□□□□□ -0.55
DDX55-203ENST00000421670 ATP5G3P48201 142 aa11.62□□□□□ -0.55
DDX55-203ENST00000421670 SUMO1P63165 101 aaKnown RBP11.62□□□□□ -0.55
DDX55-203ENST00000421670 CST9LP1Q5W188 147 aa11.62□□□□□ -0.55
DDX55-203ENST00000421670 ZNF767PQ75MW2 155 aa11.62□□□□□ -0.55
DDX55-203ENST00000421670 MRPL53Q96EL3 112 aaKnown RBP11.62□□□□□ -0.55
DDX55-203ENST00000421670 MANBALQ9NQG1 85 aa11.62□□□□□ -0.55
DDX55-203ENST00000421670 PRELID1Q9Y255 219 aa11.62□□□□□ -0.55
DDX55-203ENST00000421670 FBN3Q75N90 2809 aa11.61□□□□□ -0.55
DDX55-203ENST00000421670 PRKDCP78527 4128 aaKnown RBP11.61□□□□□ -0.55
DDX55-203ENST00000421670 IGKV2-40A0A087WW87 121 aaPredicted RBP11.61□□□□□ -0.55
DDX55-203ENST00000421670 A0A0J9YX75 114 aa11.61□□□□□ -0.55
DDX55-203ENST00000421670 IGKV2D-40P01614 121 aaPredicted RBP11.61□□□□□ -0.55
DDX55-203ENST00000421670 PPT1P50897 306 aa11.61□□□□□ -0.55
DDX55-203ENST00000421670 FOXI2Q6ZQN5 318 aa11.61□□□□□ -0.55
DDX55-203ENST00000421670 CMTM2Q8TAZ6 248 aa11.61□□□□□ -0.55
DDX55-203ENST00000421670 NBEAL2Q6ZNJ1 2754 aa11.6□□□□□ -0.55
DDX55-203ENST00000421670 IGKV3-20P01619 116 aa11.6□□□□□ -0.55
DDX55-203ENST00000421670 HLA-DRB4P13762 266 aa11.6□□□□□ -0.55
DDX55-203ENST00000421670 HIST1H1AQ02539 215 aaPredicted RBP11.6□□□□□ -0.55
DDX55-203ENST00000421670 HAGHQ16775 308 aa11.6□□□□□ -0.55
DDX55-203ENST00000421670 EBLN2Q6P2I7 272 aa11.6□□□□□ -0.55
DDX55-203ENST00000421670 STHQ8IWL8 128 aa11.6□□□□□ -0.55
DDX55-203ENST00000421670 C5orf17Q8NAS9 161 aa11.6□□□□□ -0.55
DDX55-203ENST00000421670 OR8A1Q8NGG7 326 aa11.6□□□□□ -0.55
DDX55-203ENST00000421670 TUBA4BQ9H853 241 aa11.6□□□□□ -0.55
DDX55-203ENST00000421670 ARL2-SNX15V9GYD0 113 aa11.6□□□□□ -0.55
DDX55-203ENST00000421670 HLA-DRB4X5D2U9 266 aa11.6□□□□□ -0.55
DDX55-203ENST00000421670 RPL35AP18077 110 aaKnown RBP11.59□□□□□ -0.55
DDX55-203ENST00000421670 CSN1S1P47710 185 aa11.59□□□□□ -0.55
DDX55-203ENST00000421670 CNN1P51911 297 aaKnown RBP11.59□□□□□ -0.55
DDX55-203ENST00000421670 OR4B1Q8NGF8 309 aa11.59□□□□□ -0.55
DDX55-203ENST00000421670 DIRC3C9JPN6 131 aa11.58□□□□□ -0.55
DDX55-203ENST00000421670 C11orf94C9JXX5 98 aa11.58□□□□□ -0.55
DDX55-203ENST00000421670 H3BMM0 161 aa11.58□□□□□ -0.55
DDX55-203ENST00000421670 IFNA1P01562 189 aa11.58□□□□□ -0.55
DDX55-203ENST00000421670 BCL2P10415 239 aa11.58□□□□□ -0.55
DDX55-203ENST00000421670 RAB14P61106 215 aa11.58□□□□□ -0.55
DDX55-203ENST00000421670 DEFA6Q01524 100 aa11.58□□□□□ -0.55
DDX55-203ENST00000421670 GOLT1AQ6ZVE7 132 aa11.58□□□□□ -0.55
DDX55-203ENST00000421670 CCDC28AQ8IWP9 274 aa11.58□□□□□ -0.55
DDX55-203ENST00000421670 OR10J6PQ8NGY7 276 aa11.58□□□□□ -0.55
DDX55-203ENST00000421670 RBMY1BA6NDE4 496 aaKnown RBP11.58□□□□□ -0.56
DDX55-203ENST00000421670 RBMY1EA6NEQ0 496 aaKnown RBP11.58□□□□□ -0.56
DDX55-203ENST00000421670 RBMY1DP0C7P1 496 aaKnown RBP11.58□□□□□ -0.56
DDX55-203ENST00000421670 ERCC8Q13216 396 aa11.58□□□□□ -0.56
DDX55-203ENST00000421670 TRPT1Q86TN4 253 aaKnown RBP11.58□□□□□ -0.56
DDX55-203ENST00000421670 RXFP4Q8TDU9 374 aa11.58□□□□□ -0.56
DDX55-203ENST00000421670 VGLL1Q99990 258 aa11.58□□□□□ -0.56
DDX55-203ENST00000421670 NKX6-2Q9C056 277 aaPredicted RBP11.58□□□□□ -0.56
DDX55-203ENST00000421670 EPDR1Q9UM22 224 aa11.58□□□□□ -0.56
DDX55-203ENST00000421670 TCRAP04437 139 aa11.57□□□□□ -0.56
DDX55-203ENST00000421670 PMS2P11Q13670 270 aa11.57□□□□□ -0.56
DDX55-203ENST00000421670 RARRES2Q99969 163 aa11.57□□□□□ -0.56
DDX55-203ENST00000421670 COL7A1Q02388 2944 aa11.57□□□□□ -0.56
DDX55-203ENST00000421670 TRAV8-1A0A0A6YYK1 113 aa11.56□□□□□ -0.56
DDX55-203ENST00000421670 LOC102723971A0A1B0GUV8 181 aa11.56□□□□□ -0.56
DDX55-203ENST00000421670 SCO2A0A1W2PP80 73 aa11.56□□□□□ -0.56
DDX55-203ENST00000421670 NPIPB6E9PJ23 425 aa11.56□□□□□ -0.56
DDX55-203ENST00000421670 PEX7O00628 323 aa11.56□□□□□ -0.56
DDX55-203ENST00000421670 FRMD6-AS1P0C7T7 363 aa11.56□□□□□ -0.56
DDX55-203ENST00000421670 MEF2BQ02080 365 aaPredicted RBP11.56□□□□□ -0.56
DDX55-203ENST00000421670 DEFB121Q5J5C9 76 aa11.56□□□□□ -0.56
DDX55-203ENST00000421670 TOR2AQ5JU69 321 aa11.56□□□□□ -0.56
DDX55-203ENST00000421670 CLLU1Q5K131 121 aa11.56□□□□□ -0.56
DDX55-203ENST00000421670 Q8TAT8 98 aa11.56□□□□□ -0.56
DDX55-203ENST00000421670 MRAPQ8TCY5 172 aa11.56□□□□□ -0.56
DDX55-203ENST00000421670 ATG101Q9BSB4 218 aa11.56□□□□□ -0.56
DDX55-203ENST00000421670 LOC102724200A0A096LPH7 203 aaPredicted RBP11.55□□□□□ -0.56
DDX55-203ENST00000421670 RGS13O14921 159 aa11.55□□□□□ -0.56
DDX55-203ENST00000421670 DUSP14O95147 198 aaKnown RBP11.55□□□□□ -0.56
DDX55-203ENST00000421670 CYB561D1Q8N8Q1 229 aa11.55□□□□□ -0.56
DDX55-203ENST00000421670 SGK494Q96LW2 274 aa11.55□□□□□ -0.56
DDX55-203ENST00000421670 FAM210AQ96ND0 272 aa11.55□□□□□ -0.56
DDX55-203ENST00000421670 ASCL2Q99929 193 aa11.55□□□□□ -0.56
DDX55-203ENST00000421670 SLC35B3Q9H1N7 401 aa11.55□□□□□ -0.56
DDX55-203ENST00000421670 VAX2Q9UIW0 290 aa11.55□□□□□ -0.56
DDX55-203ENST00000421670 RBFOX3A6NFN3 312 aa11.54□□□□□ -0.56
DDX55-203ENST00000421670 A8MZ25 164 aa11.54□□□□□ -0.56
DDX55-203ENST00000421670 FXYD7P58549 80 aa11.54□□□□□ -0.56
DDX55-203ENST00000421670 AMTNQ6UX39 209 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms