RNA–Protein interactions for RNA: ENST00000409952.3

LSM5-205, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-205ENST00000409952 NEDD8Q15843 81 aa2.62□□□□□ -1.99
LSM5-205ENST00000409952 ZNF181Q2M3W8 571 aa2.62□□□□□ -1.99
LSM5-205ENST00000409952 HAGHLQ6PII5 290 aaPredicted RBP2.62□□□□□ -1.99
LSM5-205ENST00000409952 LINC00301Q8NCQ3 95 aa2.62□□□□□ -1.99
LSM5-205ENST00000409952 OR2T35Q8NGX2 323 aa2.62□□□□□ -1.99
LSM5-205ENST00000409952 POP5Q969H6 163 aaKnown RBP2.62□□□□□ -1.99
LSM5-205ENST00000409952 TVP23CQ96ET8 276 aa2.62□□□□□ -1.99
LSM5-205ENST00000409952 SLC50A1Q9BRV3 221 aa2.62□□□□□ -1.99
LSM5-205ENST00000409952 RPL26L1Q9UNX3 145 aaKnown RBP2.62□□□□□ -1.99
LSM5-205ENST00000409952 LHFPL6Q9Y693 200 aa2.62□□□□□ -1.99
LSM5-205ENST00000409952 ROBO1Q9Y6N7 1651 aa2.62□□□□□ -1.99
LSM5-205ENST00000409952 MAGI3Q5TCQ9 1506 aa2.62□□□□□ -1.99
LSM5-205ENST00000409952 ABCC2Q92887 1545 aa2.62□□□□□ -1.99
LSM5-205ENST00000409952 ROCK2O75116 1388 aaKnown RBP2.61□□□□□ -1.99
LSM5-205ENST00000409952 IBTKQ9P2D0 1353 aaPredicted RBP2.61□□□□□ -1.99
LSM5-205ENST00000409952 CACNA1DQ01668 2161 aa2.61□□□□□ -1.99
LSM5-205ENST00000409952 TRPM1Q7Z4N2 1603 aa2.61□□□□□ -1.99
LSM5-205ENST00000409952 KIAA1107Q9UPP5 1409 aa2.61□□□□□ -1.99
LSM5-205ENST00000409952 PIK3C2AO00443 1686 aa2.61□□□□□ -1.99
LSM5-205ENST00000409952 FAM92AA1XBS5 289 aa2.61□□□□□ -1.99
LSM5-205ENST00000409952 ZNF705FA8MVS1 300 aaPredicted RBP2.61□□□□□ -1.99
LSM5-205ENST00000409952 E7EQL1 145 aa2.61□□□□□ -1.99
LSM5-205ENST00000409952 NPFFO15130 113 aa2.61□□□□□ -1.99
LSM5-205ENST00000409952 UBL3O95164 117 aa2.61□□□□□ -1.99
LSM5-205ENST00000409952 FABP4P15090 132 aa2.61□□□□□ -1.99
LSM5-205ENST00000409952 EMX2Q04743 252 aa2.61□□□□□ -1.99
LSM5-205ENST00000409952 DIAPH2-AS1Q14236 149 aa2.61□□□□□ -1.99
LSM5-205ENST00000409952 RNASE10Q5GAN6 216 aaKnown RBP2.61□□□□□ -1.99
LSM5-205ENST00000409952 DEFB132Q7Z7B7 95 aa2.61□□□□□ -1.99
LSM5-205ENST00000409952 C9orf163Q8N9P6 203 aa2.61□□□□□ -1.99
LSM5-205ENST00000409952 CCL4L1Q8NHW4 92 aa2.61□□□□□ -1.99
LSM5-205ENST00000409952 TMEM203Q969S6 136 aa2.61□□□□□ -1.99
LSM5-205ENST00000409952 GGACTQ9BVM4 153 aa2.61□□□□□ -1.99
LSM5-205ENST00000409952 UNC13BO14795 1591 aa2.61□□□□□ -1.99
LSM5-205ENST00000409952 SLX4Q8IY92 1834 aa2.61□□□□□ -1.99
LSM5-205ENST00000409952 OBSL1O75147 1896 aa2.6□□□□□ -1.99
LSM5-205ENST00000409952 CCDC88AQ3V6T2 1871 aa2.6□□□□□ -1.99
LSM5-205ENST00000409952 PTPRGP23470 1445 aa2.6□□□□□ -1.99
LSM5-205ENST00000409952 DLC1Q96QB1 1528 aa2.6□□□□□ -1.99
LSM5-205ENST00000409952 DCAF1Q9Y4B6 1507 aa2.6□□□□□ -1.99
LSM5-205ENST00000409952 IGLV1-51P01701 117 aa2.6□□□□□ -1.99
LSM5-205ENST00000409952 HLA-DRB4P13762 266 aa2.6□□□□□ -1.99
LSM5-205ENST00000409952 ZNF93P35789 620 aaPredicted RBP2.6□□□□□ -1.99
LSM5-205ENST00000409952 TMEM91Q6ZNR0 172 aa2.6□□□□□ -1.99
LSM5-205ENST00000409952 OR10AC1Q8NH08 325 aa2.6□□□□□ -1.99
LSM5-205ENST00000409952 HYLS1Q96M11 299 aa2.6□□□□□ -1.99
LSM5-205ENST00000409952 TPRKBQ9Y3C4 175 aa2.6□□□□□ -1.99
LSM5-205ENST00000409952 HLA-DRB4X5D2U9 266 aa2.6□□□□□ -1.99
LSM5-205ENST00000409952 A0A0C4DFX4 3053 aa2.6□□□□□ -1.99
LSM5-205ENST00000409952 ABCA8O94911 1581 aa2.6□□□□□ -1.99
LSM5-205ENST00000409952 GPR179Q6PRD1 2367 aa2.6□□□□□ -1.99
LSM5-205ENST00000409952 NUP210Q8TEM1 1887 aaPredicted RBP2.6□□□□□ -1.99
LSM5-205ENST00000409952 LRP6O75581 1613 aa2.6□□□□□ -1.99
LSM5-205ENST00000409952 PRRC2AP48634 2157 aaKnown RBP2.6□□□□□ -1.99
LSM5-205ENST00000409952 MYH7BA7E2Y1 1941 aa2.6□□□□□ -1.99
LSM5-205ENST00000409952 GREB1Q4ZG55 1949 aa2.6□□□□□ -1.99
LSM5-205ENST00000409952 C3P01024 1663 aa2.6□□□□□ -1.99
LSM5-205ENST00000409952 ZNF142P52746 1687 aaPredicted RBP2.6□□□□□ -1.99
LSM5-205ENST00000409952 SHPRHQ149N8 1683 aa2.6□□□□□ -1.99
LSM5-205ENST00000409952 CFTRP13569 1480 aa2.59□□□□□ -1.99
LSM5-205ENST00000409952 LRRC9Q6ZRR7 1453 aa2.59□□□□□ -1.99
LSM5-205ENST00000409952 PCNTO95613 3336 aa2.59□□□□□ -1.99
LSM5-205ENST00000409952 FRMPD1Q5SYB0 1578 aa2.59□□□□□ -1.99
LSM5-205ENST00000409952 TRAV27A0A087WT01 109 aa2.59□□□□□ -1.99
LSM5-205ENST00000409952 hDV103S1A0JD37 113 aa2.59□□□□□ -1.99
LSM5-205ENST00000409952 B4DSR2 109 aa2.59□□□□□ -1.99
LSM5-205ENST00000409952 M0R233 179 aa2.59□□□□□ -1.99
LSM5-205ENST00000409952 KRTAP5-8O75690 187 aa2.59□□□□□ -1.99
LSM5-205ENST00000409952 IGLV3-19P01714 112 aa2.59□□□□□ -1.99
LSM5-205ENST00000409952 SAA1P0DJI8 122 aaPredicted RBP2.59□□□□□ -1.99
LSM5-205ENST00000409952 S100PP25815 95 aa2.59□□□□□ -1.99
LSM5-205ENST00000409952 KRTAP10-8P60410 259 aa2.59□□□□□ -1.99
LSM5-205ENST00000409952 TEN1Q86WV5 123 aa2.59□□□□□ -1.99
LSM5-205ENST00000409952 Q8N814 137 aa2.59□□□□□ -1.99
LSM5-205ENST00000409952 OR5D14Q8NGL3 314 aa2.59□□□□□ -1.99
LSM5-205ENST00000409952 OR4C12Q96R67 309 aa2.59□□□□□ -1.99
LSM5-205ENST00000409952 SCN9AQ15858 1988 aa2.59□□□□□ -2
LSM5-205ENST00000409952 UTRNP46939 3433 aa2.59□□□□□ -2
LSM5-205ENST00000409952 NUP210LQ5VU65 1888 aa2.58□□□□□ -2
LSM5-205ENST00000409952 MROH2BQ7Z745 1585 aa2.58□□□□□ -2
LSM5-205ENST00000409952 IGKV2D-26A0A0A0MRZ7 120 aa2.58□□□□□ -2
LSM5-205ENST00000409952 FAM236AA0A1B0GUQ0 79 aa2.58□□□□□ -2
LSM5-205ENST00000409952 FAM236BA0A1B0GV22 79 aa2.58□□□□□ -2
LSM5-205ENST00000409952 ZNF737O75373 536 aa2.58□□□□□ -2
LSM5-205ENST00000409952 IGF2P01344 180 aa2.58□□□□□ -2
LSM5-205ENST00000409952 IFNGP01579 166 aa2.58□□□□□ -2
LSM5-205ENST00000409952 ASAH2BP0C7U1 165 aa2.58□□□□□ -2
LSM5-205ENST00000409952 RNASE2P10153 161 aaKnown RBP2.58□□□□□ -2
LSM5-205ENST00000409952 SSR2P43308 183 aa2.58□□□□□ -2
LSM5-205ENST00000409952 BLCAPP62952 87 aa2.58□□□□□ -2
LSM5-205ENST00000409952 ZNF846Q147U1 533 aa2.58□□□□□ -2
LSM5-205ENST00000409952 C1orf134Q5TEV5 83 aa2.58□□□□□ -2
LSM5-205ENST00000409952 TIMM21Q9BVV7 248 aa2.58□□□□□ -2
LSM5-205ENST00000409952 COMMD3Q9UBI1 195 aa2.58□□□□□ -2
LSM5-205ENST00000409952 TAF1LQ8IZX4 1826 aa2.58□□□□□ -2
LSM5-205ENST00000409952 KDM6AO15550 1401 aaPredicted RBP2.58□□□□□ -2
LSM5-205ENST00000409952 TNS3Q68CZ2 1445 aa2.58□□□□□ -2
LSM5-205ENST00000409952 SMG6Q86US8 1419 aaKnown RBP2.58□□□□□ -2
LSM5-205ENST00000409952 RALGAPBQ86X10 1494 aa2.58□□□□□ -2
LSM5-205ENST00000409952 EFCAB5A4FU69 1503 aa2.58□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms