RNA–Protein interactions for RNA: ENST00000402259.5

HDAC11-202, Transcript of histone deacetylase 11, humanhuman

TSL 3 BASIC

Gene HDAC11, Length 1,000 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11-202ENST00000402259 RPUSD4Q96CM3 377 aaKnown RBP12.78□□□□□ -0.36
HDAC11-202ENST00000402259 F6UB75 175 aa12.77□□□□□ -0.37
HDAC11-202ENST00000402259 HMGB3O15347 200 aaKnown RBP12.77□□□□□ -0.37
HDAC11-202ENST00000402259 DEFB1P60022 68 aa12.77□□□□□ -0.37
HDAC11-202ENST00000402259 NUTF2P61970 127 aaKnown RBP12.77□□□□□ -0.37
HDAC11-202ENST00000402259 OR8A1Q8NGG7 326 aa12.77□□□□□ -0.37
HDAC11-202ENST00000402259 TMED6Q8WW62 240 aa12.77□□□□□ -0.37
HDAC11-202ENST00000402259 PHYHIPLQ96FC7 376 aa12.77□□□□□ -0.37
HDAC11-202ENST00000402259 TMEM167BQ9NRX6 74 aa12.77□□□□□ -0.37
HDAC11-202ENST00000402259 TP53TG1Q9Y2A0 90 aa12.77□□□□□ -0.37
HDAC11-202ENST00000402259 EIF3GO75821 320 aaKnown RBP eCLIP12.76□□□□□ -0.37
HDAC11-202ENST00000402259 GCHFRP30047 84 aa12.76□□□□□ -0.37
HDAC11-202ENST00000402259 SSX7Q7RTT5 188 aa12.76□□□□□ -0.37
HDAC11-202ENST00000402259 PLA2G2EQ9NZK7 142 aa12.76□□□□□ -0.37
HDAC11-202ENST00000402259 RAB5CP51148 216 aa12.75□□□□□ -0.37
HDAC11-202ENST00000402259 CNN1P51911 297 aaKnown RBP12.75□□□□□ -0.37
HDAC11-202ENST00000402259 ICAM4Q14773 271 aa12.75□□□□□ -0.37
HDAC11-202ENST00000402259 EXOC3-AS1Q8N2X6 119 aa12.75□□□□□ -0.37
HDAC11-202ENST00000402259 OR4B1Q8NGF8 309 aa12.75□□□□□ -0.37
HDAC11-202ENST00000402259 C1QTNF4Q9BXJ3 329 aa12.75□□□□□ -0.37
HDAC11-202ENST00000402259 Q9H3A6 140 aa12.75□□□□□ -0.37
HDAC11-202ENST00000402259 ZNF705FA8MVS1 300 aaPredicted RBP12.74□□□□□ -0.37
HDAC11-202ENST00000402259 CA1P00915 261 aaPredicted RBP12.74□□□□□ -0.37
HDAC11-202ENST00000402259 GIG44P09565 113 aaPredicted RBP12.74□□□□□ -0.37
HDAC11-202ENST00000402259 RANP62826 216 aaKnown RBP12.74□□□□□ -0.37
HDAC11-202ENST00000402259 AMTNQ6UX39 209 aa12.74□□□□□ -0.37
HDAC11-202ENST00000402259 ARL6IP6Q8N6S5 226 aa12.74□□□□□ -0.37
HDAC11-202ENST00000402259 OR10J6PQ8NGY7 276 aa12.74□□□□□ -0.37
HDAC11-202ENST00000402259 MBD3L1Q8WWY6 194 aa12.74□□□□□ -0.37
HDAC11-202ENST00000402259 RNF183Q96D59 192 aa12.74□□□□□ -0.37
HDAC11-202ENST00000402259 OTORQ9NRC9 128 aa12.74□□□□□ -0.37
HDAC11-202ENST00000402259 MAP1LC3B2A6NCE7 125 aa12.73□□□□□ -0.37
HDAC11-202ENST00000402259 M0R3E3 92 aa12.73□□□□□ -0.37
HDAC11-202ENST00000402259 NKX2-5P52952 324 aaPredicted RBP12.73□□□□□ -0.37
HDAC11-202ENST00000402259 HIST1H1AQ02539 215 aaPredicted RBP12.73□□□□□ -0.37
HDAC11-202ENST00000402259 FAM74A1Q5RGS3 127 aa12.73□□□□□ -0.37
HDAC11-202ENST00000402259 FAM213BQ8TBF2 198 aa12.73□□□□□ -0.37
HDAC11-202ENST00000402259 RXFP4Q8TDU9 374 aa12.73□□□□□ -0.37
HDAC11-202ENST00000402259 MAP1LC3BQ9GZQ8 125 aa12.73□□□□□ -0.37
HDAC11-202ENST00000402259 TGP01266 2768 aa12.72□□□□□ -0.37
HDAC11-202ENST00000402259 PRAC2D3DTV9 90 aa12.72□□□□□ -0.37
HDAC11-202ENST00000402259 AMBPP02760 352 aa12.72□□□□□ -0.37
HDAC11-202ENST00000402259 FHITP49789 147 aa12.72□□□□□ -0.37
HDAC11-202ENST00000402259 SULT1A2P50226 295 aa12.72□□□□□ -0.37
HDAC11-202ENST00000402259 DEFB135Q30KP9 77 aa12.72□□□□□ -0.37
HDAC11-202ENST00000402259 OVOL2Q9BRP0 275 aa12.72□□□□□ -0.37
HDAC11-202ENST00000402259 U3KQK5 164 aa12.72□□□□□ -0.37
HDAC11-202ENST00000402259 A0A1W2PRE2 83 aa12.71□□□□□ -0.37
HDAC11-202ENST00000402259 NPIPB6E9PJ23 425 aa12.71□□□□□ -0.37
HDAC11-202ENST00000402259 SPRY2O43597 315 aa12.71□□□□□ -0.37
HDAC11-202ENST00000402259 IGKV3-20P01619 116 aa12.71□□□□□ -0.37
HDAC11-202ENST00000402259 CSN1S1P47710 185 aa12.71□□□□□ -0.37
HDAC11-202ENST00000402259 RCHY1Q96PM5 261 aa12.71□□□□□ -0.37
HDAC11-202ENST00000402259 ODF3Q96PU9 254 aa12.71□□□□□ -0.37
HDAC11-202ENST00000402259 COL7A1Q02388 2944 aa12.7□□□□□ -0.38
HDAC11-202ENST00000402259 RBAKDNA6NC62 111 aa12.7□□□□□ -0.38
HDAC11-202ENST00000402259 PGPA6NDG6 321 aa12.7□□□□□ -0.38
HDAC11-202ENST00000402259 SLC25A5P05141 298 aaKnown RBP12.7□□□□□ -0.38
HDAC11-202ENST00000402259 ZNF705DP0CH99 300 aaPredicted RBP12.7□□□□□ -0.38
HDAC11-202ENST00000402259 ZNF705BP0CI00 300 aaPredicted RBP12.7□□□□□ -0.38
HDAC11-202ENST00000402259 C9orf47Q6ZRZ4 202 aa12.7□□□□□ -0.38
HDAC11-202ENST00000402259 CSNK1G2-AS1Q8NCQ2 148 aa12.7□□□□□ -0.38
HDAC11-202ENST00000402259 LINC00477Q96M19 166 aa12.7□□□□□ -0.38
HDAC11-202ENST00000402259 SLC35B3Q9H1N7 401 aa12.7□□□□□ -0.38
HDAC11-202ENST00000402259 RETNQ9HD89 108 aa12.7□□□□□ -0.38
HDAC11-202ENST00000402259 TENM3Q9P273 2699 aa12.69□□□□□ -0.38
HDAC11-202ENST00000402259 DNAH9Q9NYC9 4486 aa12.69□□□□□ -0.38
HDAC11-202ENST00000402259 BOLA2-SMG1P6H3BVE0 249 aa12.69□□□□□ -0.38
HDAC11-202ENST00000402259 H2AFB1P0C5Y9 115 aa12.69□□□□□ -0.38
HDAC11-202ENST00000402259 FGF8P55075 233 aaPredicted RBP12.69□□□□□ -0.38
HDAC11-202ENST00000402259 IQCF2Q8IXL9 164 aa12.69□□□□□ -0.38
HDAC11-202ENST00000402259 CMTM2Q8TAZ6 248 aa12.69□□□□□ -0.38
HDAC11-202ENST00000402259 SFT2D1Q8WV19 159 aa12.69□□□□□ -0.38
HDAC11-202ENST00000402259 NKX6-2Q9C056 277 aaPredicted RBP12.69□□□□□ -0.38
HDAC11-202ENST00000402259 ARL2-SNX15V9GYD0 113 aa12.69□□□□□ -0.38
HDAC11-202ENST00000402259 NBEAL2Q6ZNJ1 2754 aa12.68□□□□□ -0.38
HDAC11-202ENST00000402259 TRAV1-1A0A0B4J248 108 aa12.68□□□□□ -0.38
HDAC11-202ENST00000402259 C5orf17Q8NAS9 161 aa12.68□□□□□ -0.38
HDAC11-202ENST00000402259 TMPRSS5Q9H3S3 457 aa12.68□□□□□ -0.38
HDAC11-202ENST00000402259 PPP1R14DQ9NXH3 145 aa12.68□□□□□ -0.38
HDAC11-202ENST00000402259 XCL2Q9UBD3 114 aa12.68□□□□□ -0.38
HDAC11-202ENST00000402259 STAB2Q8WWQ8 2551 aa12.67□□□□□ -0.38
HDAC11-202ENST00000402259 TRBV7-9A0A0J9YWB2 115 aa12.67□□□□□ -0.38
HDAC11-202ENST00000402259 SERTM2A0A1B0GWG4 89 aa12.67□□□□□ -0.38
HDAC11-202ENST00000402259 DIRC3C9JPN6 131 aa12.67□□□□□ -0.38
HDAC11-202ENST00000402259 TSPOP30536 169 aa12.67□□□□□ -0.38
HDAC11-202ENST00000402259 PPT1P50897 306 aa12.67□□□□□ -0.38
HDAC11-202ENST00000402259 IGF2BP2-AS1Q96M15 143 aa12.67□□□□□ -0.38
HDAC11-202ENST00000402259 BOLA1Q9Y3E2 137 aa12.67□□□□□ -0.38
HDAC11-202ENST00000402259 IGKV2-40A0A087WW87 121 aaPredicted RBP12.66□□□□□ -0.38
HDAC11-202ENST00000402259 ZNF705EA8MWA4 302 aaPredicted RBP12.66□□□□□ -0.38
HDAC11-202ENST00000402259 GGTLC3B5MD39 225 aa12.66□□□□□ -0.38
HDAC11-202ENST00000402259 TEX46H3BTG2 121 aa12.66□□□□□ -0.38
HDAC11-202ENST00000402259 IGKV2D-40P01614 121 aaPredicted RBP12.66□□□□□ -0.38
HDAC11-202ENST00000402259 CDKN1BP46527 198 aa12.66□□□□□ -0.38
HDAC11-202ENST00000402259 SPINK13Q1W4C9 94 aa12.66□□□□□ -0.38
HDAC11-202ENST00000402259 TMEM78Q5T7P6 136 aa12.66□□□□□ -0.38
HDAC11-202ENST00000402259 AGPAT4-IT1Q9H0P7 198 aa12.66□□□□□ -0.38
HDAC11-202ENST00000402259 FAM74A7A6NL05 159 aa12.65□□□□□ -0.38
HDAC11-202ENST00000402259 M0R2Z0 102 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms