RNA–Protein interactions for RNA: ENST00000399042.4

BRCC3-206, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene BRCC3, Length 954 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-206ENST00000399042 NKX6-2Q9C056 277 aaPredicted RBP6.68□□□□□ -1.34
BRCC3-206ENST00000399042 MANBALQ9NQG1 85 aa6.68□□□□□ -1.34
BRCC3-206ENST00000399042 ZNF331Q9NQX6 463 aaPredicted RBP6.68□□□□□ -1.34
BRCC3-206ENST00000399042 PRELID1Q9Y255 219 aa6.68□□□□□ -1.34
BRCC3-206ENST00000399042 VWFP04275 2813 aa6.68□□□□□ -1.34
BRCC3-206ENST00000399042 ANK2Q01484 3957 aa6.67□□□□□ -1.34
BRCC3-206ENST00000399042 TRAV1-1A0A0B4J248 108 aa6.67□□□□□ -1.34
BRCC3-206ENST00000399042 TMEM238LA0A1B0GVL6 79 aa6.67□□□□□ -1.34
BRCC3-206ENST00000399042 F6UZH7 168 aa6.67□□□□□ -1.34
BRCC3-206ENST00000399042 PAGE4O60829 102 aa6.67□□□□□ -1.34
BRCC3-206ENST00000399042 IGKV3-20P01619 116 aa6.67□□□□□ -1.34
BRCC3-206ENST00000399042 PRB2P02812 416 aaPredicted RBP6.67□□□□□ -1.34
BRCC3-206ENST00000399042 HLA-DMBP28068 263 aa6.67□□□□□ -1.34
BRCC3-206ENST00000399042 KRTAP10-11P60412 298 aa6.67□□□□□ -1.34
BRCC3-206ENST00000399042 CCL20P78556 96 aa6.67□□□□□ -1.34
BRCC3-206ENST00000399042 HIST1H1AQ02539 215 aaPredicted RBP6.67□□□□□ -1.34
BRCC3-206ENST00000399042 HAGHQ16775 308 aa6.67□□□□□ -1.34
BRCC3-206ENST00000399042 BEAN1Q3B7T3 259 aa6.67□□□□□ -1.34
BRCC3-206ENST00000399042 FAM24BQ8N5W8 94 aa6.67□□□□□ -1.34
BRCC3-206ENST00000399042 DEFB125Q8N687 156 aa6.67□□□□□ -1.34
BRCC3-206ENST00000399042 OR4B1Q8NGF8 309 aa6.67□□□□□ -1.34
BRCC3-206ENST00000399042 EIF5A2Q9GZV4 153 aaKnown RBP6.67□□□□□ -1.34
BRCC3-206ENST00000399042 MAP6D1Q9H9H5 199 aa6.67□□□□□ -1.34
BRCC3-206ENST00000399042 MGAM2Q2M2H8 2515 aa6.67□□□□□ -1.34
BRCC3-206ENST00000399042 TRRAPQ9Y4A5 3859 aa6.66□□□□□ -1.34
BRCC3-206ENST00000399042 TRAV8-2A0A0B4J237 113 aa6.66□□□□□ -1.34
BRCC3-206ENST00000399042 A0A1W2PRE2 83 aa6.66□□□□□ -1.34
BRCC3-206ENST00000399042 KNCNA6PVL3 124 aa6.66□□□□□ -1.34
BRCC3-206ENST00000399042 ZNF705FA8MVS1 300 aaPredicted RBP6.66□□□□□ -1.34
BRCC3-206ENST00000399042 C11orf94C9JXX5 98 aa6.66□□□□□ -1.34
BRCC3-206ENST00000399042 DUSP14O95147 198 aaKnown RBP6.66□□□□□ -1.34
BRCC3-206ENST00000399042 NDUFB4O95168 129 aa6.66□□□□□ -1.34
BRCC3-206ENST00000399042 PRB4P10163 310 aaPredicted RBP6.66□□□□□ -1.34
BRCC3-206ENST00000399042 EGFEM1PQ0D2K5 195 aa6.66□□□□□ -1.34
BRCC3-206ENST00000399042 C20orf173Q96LM9 149 aa6.66□□□□□ -1.34
BRCC3-206ENST00000399042 SRD5A3Q9H8P0 318 aa6.66□□□□□ -1.34
BRCC3-206ENST00000399042 FAM74A7A6NL05 159 aa6.65□□□□□ -1.34
BRCC3-206ENST00000399042 F6UB75 175 aa6.65□□□□□ -1.34
BRCC3-206ENST00000399042 M0R3E3 92 aa6.65□□□□□ -1.34
BRCC3-206ENST00000399042 SOCS3O14543 225 aa6.65□□□□□ -1.34
BRCC3-206ENST00000399042 RPL35AP18077 110 aaKnown RBP6.65□□□□□ -1.34
BRCC3-206ENST00000399042 TAGLN2P37802 199 aaKnown RBP6.65□□□□□ -1.34
BRCC3-206ENST00000399042 CEBPGP53567 150 aa6.65□□□□□ -1.34
BRCC3-206ENST00000399042 NUTF2P61970 127 aaKnown RBP6.65□□□□□ -1.34
BRCC3-206ENST00000399042 ODF3L2Q3SX64 289 aa6.65□□□□□ -1.34
BRCC3-206ENST00000399042 TMEM78Q5T7P6 136 aa6.65□□□□□ -1.34
BRCC3-206ENST00000399042 FOXI2Q6ZQN5 318 aa6.65□□□□□ -1.34
BRCC3-206ENST00000399042 C5orf17Q8NAS9 161 aa6.65□□□□□ -1.34
BRCC3-206ENST00000399042 MRPL53Q96EL3 112 aaKnown RBP6.65□□□□□ -1.34
BRCC3-206ENST00000399042 EPDR1Q9UM22 224 aa6.65□□□□□ -1.34
BRCC3-206ENST00000399042 YTHDF2Q9Y5A9 579 aaKnown RBP6.65□□□□□ -1.34
BRCC3-206ENST00000399042 RBFOX3A6NFN3 312 aa6.64□□□□□ -1.35
BRCC3-206ENST00000399042 EIF4EBP3O60516 100 aaPredicted RBP6.64□□□□□ -1.35
BRCC3-206ENST00000399042 ZNF705DP0CH99 300 aaPredicted RBP6.64□□□□□ -1.35
BRCC3-206ENST00000399042 ZNF705BP0CI00 300 aaPredicted RBP6.64□□□□□ -1.35
BRCC3-206ENST00000399042 BCL2P10415 239 aa6.64□□□□□ -1.35
BRCC3-206ENST00000399042 ATP5G3P48201 142 aa6.64□□□□□ -1.35
BRCC3-206ENST00000399042 DEFB1P60022 68 aa6.64□□□□□ -1.35
BRCC3-206ENST00000399042 UBE2G1P62253 170 aa6.64□□□□□ -1.35
BRCC3-206ENST00000399042 GNG5P63218 68 aa6.64□□□□□ -1.35
BRCC3-206ENST00000399042 ZNF124Q15973 351 aa6.64□□□□□ -1.35
BRCC3-206ENST00000399042 TOR2AQ5JU69 321 aa6.64□□□□□ -1.35
BRCC3-206ENST00000399042 GOLT1AQ6ZVE7 132 aa6.64□□□□□ -1.35
BRCC3-206ENST00000399042 OR8A1Q8NGG7 326 aa6.64□□□□□ -1.35
BRCC3-206ENST00000399042 FAM110AQ9BQ89 295 aa6.64□□□□□ -1.35
BRCC3-206ENST00000399042 TXNDC17Q9BRA2 123 aa6.64□□□□□ -1.35
BRCC3-206ENST00000399042 WFDC10AQ9H1F0 79 aa6.64□□□□□ -1.35
BRCC3-206ENST00000399042 AURKAIP1Q9NWT8 199 aaPredicted RBP6.64□□□□□ -1.35
BRCC3-206ENST00000399042 VAX2Q9UIW0 290 aa6.64□□□□□ -1.35
BRCC3-206ENST00000399042 ARL2-SNX15V9GYD0 113 aa6.64□□□□□ -1.35
BRCC3-206ENST00000399042 IGKV2-40A0A087WW87 121 aaPredicted RBP6.63□□□□□ -1.35
BRCC3-206ENST00000399042 LOC102724200A0A096LPH7 203 aaPredicted RBP6.63□□□□□ -1.35
BRCC3-206ENST00000399042 GGTLC3B5MD39 225 aa6.63□□□□□ -1.35
BRCC3-206ENST00000399042 DIRC3C9JPN6 131 aa6.63□□□□□ -1.35
BRCC3-206ENST00000399042 PRAC2D3DTV9 90 aa6.63□□□□□ -1.35
BRCC3-206ENST00000399042 PEX7O00628 323 aa6.63□□□□□ -1.35
BRCC3-206ENST00000399042 PDE6DO43924 150 aa6.63□□□□□ -1.35
BRCC3-206ENST00000399042 IGKV2D-40P01614 121 aaPredicted RBP6.63□□□□□ -1.35
BRCC3-206ENST00000399042 NMBP08949 121 aa6.63□□□□□ -1.35
BRCC3-206ENST00000399042 IGHV4-30-4P0DP06 118 aa6.63□□□□□ -1.35
BRCC3-206ENST00000399042 AKR1C3P42330 323 aa6.63□□□□□ -1.35
BRCC3-206ENST00000399042 CNN1P51911 297 aaKnown RBP6.63□□□□□ -1.35
BRCC3-206ENST00000399042 IFITM2Q01629 132 aa6.63□□□□□ -1.35
BRCC3-206ENST00000399042 MEF2BQ02080 365 aaPredicted RBP6.63□□□□□ -1.35
BRCC3-206ENST00000399042 PEA15Q15121 130 aa6.63□□□□□ -1.35
BRCC3-206ENST00000399042 CYB561D1Q8N8Q1 229 aa6.63□□□□□ -1.35
BRCC3-206ENST00000399042 SUN5Q8TC36 379 aa6.63□□□□□ -1.35
BRCC3-206ENST00000399042 MRAPQ8TCY5 172 aa6.63□□□□□ -1.35
BRCC3-206ENST00000399042 HIST1H2BAQ96A08 127 aa6.63□□□□□ -1.35
BRCC3-206ENST00000399042 TCEAL7Q9BRU2 100 aa6.63□□□□□ -1.35
BRCC3-206ENST00000399042 NDFIP1Q9BT67 221 aa6.63□□□□□ -1.35
BRCC3-206ENST00000399042 SAV1Q9H4B6 383 aaPredicted RBP6.63□□□□□ -1.35
BRCC3-206ENST00000399042 TREM1Q9NP99 234 aa6.63□□□□□ -1.35
BRCC3-206ENST00000399042 MED9Q9NWA0 146 aa6.63□□□□□ -1.35
BRCC3-206ENST00000399042 SORL1Q92673 2214 aa6.62□□□□□ -1.35
BRCC3-206ENST00000399042 DNHD1Q96M86 4753 aa6.62□□□□□ -1.35
BRCC3-206ENST00000399042 A0A0J9YX75 114 aa6.62□□□□□ -1.35
BRCC3-206ENST00000399042 LOC102723971A0A1B0GUV8 181 aa6.62□□□□□ -1.35
BRCC3-206ENST00000399042 SERTM2A0A1B0GWG4 89 aa6.62□□□□□ -1.35
BRCC3-206ENST00000399042 J3KRW8 73 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms