RNA–Protein interactions for RNA: ENST00000398258.7

CD47-203, Transcript of CD47 molecule, humanhuman

TSL 3

Gene CD47, Length 469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-203ENST00000398258 SPRNQ5BIV9 151 aa0.66□□□□□ -2.3
CD47-203ENST00000398258 TMEM78Q5T7P6 136 aa0.66□□□□□ -2.3
CD47-203ENST00000398258 GDF5OSQ5U4N7 250 aa0.66□□□□□ -2.3
CD47-203ENST00000398258 HRCT1Q6UXD1 115 aa0.66□□□□□ -2.3
CD47-203ENST00000398258 PHF5AQ7RTV0 110 aaKnown RBP0.66□□□□□ -2.3
CD47-203ENST00000398258 SMIM15Q7Z3B0 74 aa0.66□□□□□ -2.3
CD47-203ENST00000398258 FAM216BQ8N7L0 139 aa0.66□□□□□ -2.3
CD47-203ENST00000398258 TP53RKQ96S44 253 aa0.66□□□□□ -2.3
CD47-203ENST00000398258 EFCAB11Q9BUY7 163 aa0.66□□□□□ -2.3
CD47-203ENST00000398258 OR2H1Q9GZK4 316 aa0.66□□□□□ -2.3
CD47-203ENST00000398258 LRTM1Q9HBL6 345 aa0.66□□□□□ -2.3
CD47-203ENST00000398258 LAMTOR3Q9UHA4 124 aa0.66□□□□□ -2.3
CD47-203ENST00000398258 KIF14Q15058 1648 aa0.66□□□□□ -2.3
CD47-203ENST00000398258 RFX7Q2KHR2 1363 aa0.66□□□□□ -2.3
CD47-203ENST00000398258 UNC13BO14795 1591 aa0.66□□□□□ -2.3
CD47-203ENST00000398258 GLI2P10070 1586 aa0.66□□□□□ -2.3
CD47-203ENST00000398258 FAM135BQ49AJ0 1406 aa0.65□□□□□ -2.3
CD47-203ENST00000398258 CD109Q6YHK3 1445 aa0.65□□□□□ -2.3
CD47-203ENST00000398258 PRG4Q92954 1404 aaPredicted RBP0.65□□□□□ -2.3
CD47-203ENST00000398258 ABCC3O15438 1527 aa0.65□□□□□ -2.31
CD47-203ENST00000398258 MAGI3Q5TCQ9 1506 aa0.65□□□□□ -2.31
CD47-203ENST00000398258 ABCC2Q92887 1545 aa0.65□□□□□ -2.31
CD47-203ENST00000398258 FAM135AQ9P2D6 1515 aa0.65□□□□□ -2.31
CD47-203ENST00000398258 TRAV5A0A0B4J249 113 aa0.65□□□□□ -2.31
CD47-203ENST00000398258 TRBV6-4A0A1B0GX49 114 aa0.65□□□□□ -2.31
CD47-203ENST00000398258 TRDV1A0A1B0GX56 115 aa0.65□□□□□ -2.31
CD47-203ENST00000398258 FABP2P12104 132 aa0.65□□□□□ -2.31
CD47-203ENST00000398258 S100A11P31949 105 aa0.65□□□□□ -2.31
CD47-203ENST00000398258 TMEM128Q5BJH2 165 aa0.65□□□□□ -2.31
CD47-203ENST00000398258 GKN2Q86XP6 184 aa0.65□□□□□ -2.31
CD47-203ENST00000398258 LRRC18Q8N456 261 aa0.65□□□□□ -2.31
CD47-203ENST00000398258 ISOC1Q96CN7 298 aa0.65□□□□□ -2.31
CD47-203ENST00000398258 MUCL1Q96DR8 90 aa0.65□□□□□ -2.31
CD47-203ENST00000398258 HYLS1Q96M11 299 aa0.65□□□□□ -2.31
CD47-203ENST00000398258 CENPHQ9H3R5 247 aa0.65□□□□□ -2.31
CD47-203ENST00000398258 NIT2Q9NQR4 276 aa0.65□□□□□ -2.31
CD47-203ENST00000398258 ORMDL1Q9P0S3 153 aa0.65□□□□□ -2.31
CD47-203ENST00000398258 TMEM14CQ9P0S9 112 aa0.65□□□□□ -2.31
CD47-203ENST00000398258 SMPXQ9UHP9 88 aa0.65□□□□□ -2.31
CD47-203ENST00000398258 TRAPPC2LQ9UL33 140 aa0.65□□□□□ -2.31
CD47-203ENST00000398258 MYH7BA7E2Y1 1941 aa0.65□□□□□ -2.31
CD47-203ENST00000398258 ROCK1Q13464 1354 aa0.65□□□□□ -2.31
CD47-203ENST00000398258 SHANK2Q9UPX8 1470 aa0.65□□□□□ -2.31
CD47-203ENST00000398258 CFAP74Q9C0B2 1584 aa0.65□□□□□ -2.31
CD47-203ENST00000398258 PREX1Q8TCU6 1659 aa0.65□□□□□ -2.31
CD47-203ENST00000398258 MED12Q93074 2177 aa0.64□□□□□ -2.31
CD47-203ENST00000398258 PTPRGP23470 1445 aa0.64□□□□□ -2.31
CD47-203ENST00000398258 CLIP1P30622 1438 aa0.64□□□□□ -2.31
CD47-203ENST00000398258 ZFYVE16Q7Z3T8 1539 aa0.64□□□□□ -2.31
CD47-203ENST00000398258 DCAF1Q9Y4B6 1507 aa0.64□□□□□ -2.31
CD47-203ENST00000398258 IGHV1-58A0A0C4DH39 117 aa0.64□□□□□ -2.31
CD47-203ENST00000398258 hDV103S1A0JD37 113 aa0.64□□□□□ -2.31
CD47-203ENST00000398258 C9orf170A2RU37 121 aa0.64□□□□□ -2.31
CD47-203ENST00000398258 E7EQ34 232 aa0.64□□□□□ -2.31
CD47-203ENST00000398258 C5orf67F2Z3F1 127 aa0.64□□□□□ -2.31
CD47-203ENST00000398258 H3BRM9 83 aa0.64□□□□□ -2.31
CD47-203ENST00000398258 KPNA4O00629 521 aaPredicted RBP0.64□□□□□ -2.31
CD47-203ENST00000398258 LYRM1O43325 122 aa0.64□□□□□ -2.31
CD47-203ENST00000398258 NUPR1O60356 82 aa0.64□□□□□ -2.31
CD47-203ENST00000398258 PFDN1O60925 122 aa0.64□□□□□ -2.31
CD47-203ENST00000398258 CXCL8P10145 99 aa0.64□□□□□ -2.31
CD47-203ENST00000398258 RPL7P18124 248 aaKnown RBP0.64□□□□□ -2.31
CD47-203ENST00000398258 S100GP29377 79 aa0.64□□□□□ -2.31
CD47-203ENST00000398258 RPL35P42766 123 aaKnown RBP0.64□□□□□ -2.31
CD47-203ENST00000398258 TMEM14EPQ6UXP3 125 aa0.64□□□□□ -2.31
CD47-203ENST00000398258 ARPINQ7Z6K5 226 aa0.64□□□□□ -2.31
CD47-203ENST00000398258 TEN1Q86WV5 123 aa0.64□□□□□ -2.31
CD47-203ENST00000398258 PRR15Q8IV56 129 aa0.64□□□□□ -2.31
CD47-203ENST00000398258 TEX29Q8N6K0 151 aa0.64□□□□□ -2.31
CD47-203ENST00000398258 THEM6Q8WUY1 208 aa0.64□□□□□ -2.31
CD47-203ENST00000398258 LINC00052Q96N35 136 aa0.64□□□□□ -2.31
CD47-203ENST00000398258 TAF9BQ9HBM6 251 aa0.64□□□□□ -2.31
CD47-203ENST00000398258 LAMTOR2Q9Y2Q5 125 aa0.64□□□□□ -2.31
CD47-203ENST00000398258 NDUFAF1Q9Y375 327 aa0.64□□□□□ -2.31
CD47-203ENST00000398258 POLA1P09884 1462 aaPredicted RBP0.64□□□□□ -2.31
CD47-203ENST00000398258 GOLGA3Q08378 1498 aa0.64□□□□□ -2.31
CD47-203ENST00000398258 GRIN2AQ12879 1464 aa0.64□□□□□ -2.31
CD47-203ENST00000398258 SETBP1Q9Y6X0 1596 aa0.64□□□□□ -2.31
CD47-203ENST00000398258 UBR2Q8IWV8 1755 aa0.64□□□□□ -2.31
CD47-203ENST00000398258 TARBP1Q13395 1621 aaKnown RBP0.64□□□□□ -2.31
CD47-203ENST00000398258 MADDQ8WXG6 1647 aa0.64□□□□□ -2.31
CD47-203ENST00000398258 TULP4Q9NRJ4 1543 aa0.64□□□□□ -2.31
CD47-203ENST00000398258 FHAD1B1AJZ9 1412 aa0.64□□□□□ -2.31
CD47-203ENST00000398258 SOGA1O94964 1423 aa0.64□□□□□ -2.31
CD47-203ENST00000398258 NSD3Q9BZ95 1437 aa0.64□□□□□ -2.31
CD47-203ENST00000398258 MCM3APO60318 1980 aa0.63□□□□□ -2.31
CD47-203ENST00000398258 EML6Q6ZMW3 1958 aa0.63□□□□□ -2.31
CD47-203ENST00000398258 PIK3C2AO00443 1686 aa0.63□□□□□ -2.31
CD47-203ENST00000398258 FRMPD1Q5SYB0 1578 aa0.63□□□□□ -2.31
CD47-203ENST00000398258 DNMBPQ6XZF7 1577 aa0.63□□□□□ -2.31
CD47-203ENST00000398258 COL1A1P02452 1464 aaPredicted RBP0.63□□□□□ -2.31
CD47-203ENST00000398258 CFTRP13569 1480 aa0.63□□□□□ -2.31
CD47-203ENST00000398258 NKTRP30414 1462 aaKnown RBP0.63□□□□□ -2.31
CD47-203ENST00000398258 CAMSAP2Q08AD1 1489 aa0.63□□□□□ -2.31
CD47-203ENST00000398258 CCDC18Q5T9S5 1454 aa0.63□□□□□ -2.31
CD47-203ENST00000398258 RAPGEF2Q9Y4G8 1499 aa0.63□□□□□ -2.31
CD47-203ENST00000398258 TRAV27A0A087WT01 109 aa0.63□□□□□ -2.31
CD47-203ENST00000398258 GNG14A0A1W2PPG7 69 aa0.63□□□□□ -2.31
CD47-203ENST00000398258 BCL2P10415 239 aa0.63□□□□□ -2.31
CD47-203ENST00000398258 SDC2P34741 201 aa0.63□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms