RNA–Protein interactions for RNA: ENST00000398137.5

U2AF1-203, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-203ENST00000398137 PHYHIPLQ96FC7 376 aa18.7■□□□□ 0.58
U2AF1-203ENST00000398137 CTXND1A0A1B0GTU2 59 aa18.69■□□□□ 0.58
U2AF1-203ENST00000398137 PDE6HQ13956 83 aa18.69■□□□□ 0.58
U2AF1-203ENST00000398137 PSG3Q16557 428 aa18.69■□□□□ 0.58
U2AF1-203ENST00000398137 FOXI2Q6ZQN5 318 aa18.69■□□□□ 0.58
U2AF1-203ENST00000398137 SAV1Q9H4B6 383 aaPredicted RBP18.69■□□□□ 0.58
U2AF1-203ENST00000398137 BOLA1Q9Y3E2 137 aa18.69■□□□□ 0.58
U2AF1-203ENST00000398137 BOLA2-SMG1P6H3BVE0 249 aa18.68■□□□□ 0.58
U2AF1-203ENST00000398137 HLA-DRB4P13762 266 aa18.68■□□□□ 0.58
U2AF1-203ENST00000398137 FHITP49789 147 aa18.68■□□□□ 0.58
U2AF1-203ENST00000398137 TRPT1Q86TN4 253 aaKnown RBP18.68■□□□□ 0.58
U2AF1-203ENST00000398137 HLA-DRB4X5D2U9 266 aa18.68■□□□□ 0.58
U2AF1-203ENST00000398137 DNAH1Q9P2D7 4330 aa18.68■□□□□ 0.58
U2AF1-203ENST00000398137 UMAD1C9J7I0 102 aa18.67■□□□□ 0.58
U2AF1-203ENST00000398137 GCHFRP30047 84 aa18.67■□□□□ 0.58
U2AF1-203ENST00000398137 PSG9Q00887 426 aa18.67■□□□□ 0.58
U2AF1-203ENST00000398137 EBLN2Q6P2I7 272 aa18.67■□□□□ 0.58
U2AF1-203ENST00000398137 EXOC3-AS1Q8N2X6 119 aa18.67■□□□□ 0.58
U2AF1-203ENST00000398137 FAM213BQ8TBF2 198 aa18.67■□□□□ 0.58
U2AF1-203ENST00000398137 AGRNO00468 2067 aa18.66■□□□□ 0.58
U2AF1-203ENST00000398137 ZNF705FA8MVS1 300 aaPredicted RBP18.66■□□□□ 0.58
U2AF1-203ENST00000398137 H3BMM0 161 aa18.66■□□□□ 0.58
U2AF1-203ENST00000398137 CXorf1O96002 111 aa18.66■□□□□ 0.58
U2AF1-203ENST00000398137 EIF5AL1Q6IS14 154 aaKnown RBP18.66■□□□□ 0.58
U2AF1-203ENST00000398137 IQCF2Q8IXL9 164 aa18.66■□□□□ 0.58
U2AF1-203ENST00000398137 RPUSD4Q96CM3 377 aaKnown RBP18.66■□□□□ 0.58
U2AF1-203ENST00000398137 A0A0J9YX75 114 aa18.65■□□□□ 0.58
U2AF1-203ENST00000398137 MAP1LC3B2A6NCE7 125 aa18.65■□□□□ 0.58
U2AF1-203ENST00000398137 IGKV3-20P01619 116 aa18.65■□□□□ 0.58
U2AF1-203ENST00000398137 ZNF705DP0CH99 300 aaPredicted RBP18.65■□□□□ 0.58
U2AF1-203ENST00000398137 ZNF705BP0CI00 300 aaPredicted RBP18.65■□□□□ 0.58
U2AF1-203ENST00000398137 APOC4P55056 127 aa18.65■□□□□ 0.58
U2AF1-203ENST00000398137 FGF8P55075 233 aaPredicted RBP18.65■□□□□ 0.58
U2AF1-203ENST00000398137 MAP1LC3BQ9GZQ8 125 aa18.65■□□□□ 0.58
U2AF1-203ENST00000398137 AAMDCQ9H7C9 122 aa18.65■□□□□ 0.58
U2AF1-203ENST00000398137 CLEC5AQ9NY25 188 aa18.65■□□□□ 0.58
U2AF1-203ENST00000398137 M0R3E3 92 aa18.64■□□□□ 0.57
U2AF1-203ENST00000398137 RANP62826 216 aaKnown RBP18.64■□□□□ 0.57
U2AF1-203ENST00000398137 ICAM4Q14773 271 aa18.64■□□□□ 0.57
U2AF1-203ENST00000398137 OR4B1Q8NGF8 309 aa18.63■□□□□ 0.57
U2AF1-203ENST00000398137 Q9H3A6 140 aa18.63■□□□□ 0.57
U2AF1-203ENST00000398137 KIR2DL5BA0A0G2JN68 375 aa18.62■□□□□ 0.57
U2AF1-203ENST00000398137 KIR2DL5BA0A0G2JPC4 375 aa18.62■□□□□ 0.57
U2AF1-203ENST00000398137 PRAC2D3DTV9 90 aa18.62■□□□□ 0.57
U2AF1-203ENST00000398137 HIST1H1AQ02539 215 aaPredicted RBP18.62■□□□□ 0.57
U2AF1-203ENST00000398137 DPPA3Q6W0C5 159 aa18.62■□□□□ 0.57
U2AF1-203ENST00000398137 KIR2DL5AQ8N109 375 aa18.62■□□□□ 0.57
U2AF1-203ENST00000398137 OR8A1Q8NGG7 326 aa18.62■□□□□ 0.57
U2AF1-203ENST00000398137 KIR2DL5BQ8NHK3 375 aa18.62■□□□□ 0.57
U2AF1-203ENST00000398137 MRPL53Q96EL3 112 aaKnown RBP18.62■□□□□ 0.57
U2AF1-203ENST00000398137 PRELID1Q9Y255 219 aa18.62■□□□□ 0.57
U2AF1-203ENST00000398137 CNN1P51911 297 aaKnown RBP18.61■□□□□ 0.57
U2AF1-203ENST00000398137 CSTL1Q9H114 145 aa18.61■□□□□ 0.57
U2AF1-203ENST00000398137 TMPRSS5Q9H3S3 457 aa18.61■□□□□ 0.57
U2AF1-203ENST00000398137 TMEM167BQ9NRX6 74 aa18.61■□□□□ 0.57
U2AF1-203ENST00000398137 CA1P00915 261 aaPredicted RBP18.6■□□□□ 0.57
U2AF1-203ENST00000398137 FAM74A1Q5RGS3 127 aa18.6■□□□□ 0.57
U2AF1-203ENST00000398137 LYPD1Q8N2G4 141 aa18.6■□□□□ 0.57
U2AF1-203ENST00000398137 HYDINQ4G0P3 5121 aa18.59■□□□□ 0.57
U2AF1-203ENST00000398137 LCE6AA0A183 80 aa18.59■□□□□ 0.57
U2AF1-203ENST00000398137 DUSP14O95147 198 aaKnown RBP18.59■□□□□ 0.57
U2AF1-203ENST00000398137 SULT1A2P50226 295 aa18.59■□□□□ 0.57
U2AF1-203ENST00000398137 MORN3Q6PF18 240 aaPredicted RBP18.59■□□□□ 0.57
U2AF1-203ENST00000398137 SUN5Q8TC36 379 aa18.59■□□□□ 0.57
U2AF1-203ENST00000398137 A0A1B0GV50 99 aa18.58■□□□□ 0.56
U2AF1-203ENST00000398137 RAB5CP51148 216 aa18.58■□□□□ 0.56
U2AF1-203ENST00000398137 ALKAL2Q6UX46 152 aa18.58■□□□□ 0.56
U2AF1-203ENST00000398137 OR10J6PQ8NGY7 276 aa18.58■□□□□ 0.56
U2AF1-203ENST00000398137 SFT2D1Q8WV19 159 aa18.58■□□□□ 0.56
U2AF1-203ENST00000398137 OTORQ9NRC9 128 aa18.58■□□□□ 0.56
U2AF1-203ENST00000398137 PLECQ15149 4684 aaKnown RBP18.57■□□□□ 0.56
U2AF1-203ENST00000398137 UBE2CO00762 179 aa18.57■□□□□ 0.56
U2AF1-203ENST00000398137 FXYD7P58549 80 aa18.57■□□□□ 0.56
U2AF1-203ENST00000398137 DEFB135Q30KP9 77 aa18.57■□□□□ 0.56
U2AF1-203ENST00000398137 MBD3L1Q8WWY6 194 aa18.57■□□□□ 0.56
U2AF1-203ENST00000398137 CLUHP3Q96NS8 147 aa18.57■□□□□ 0.56
U2AF1-203ENST00000398137 A8MTW9 85 aa18.56■□□□□ 0.56
U2AF1-203ENST00000398137 GIG44P09565 113 aaPredicted RBP18.56■□□□□ 0.56
U2AF1-203ENST00000398137 H2AFB1P0C5Y9 115 aa18.56■□□□□ 0.56
U2AF1-203ENST00000398137 OVOL2Q9BRP0 275 aa18.56■□□□□ 0.56
U2AF1-203ENST00000398137 SLC35B3Q9H1N7 401 aa18.56■□□□□ 0.56
U2AF1-203ENST00000398137 IGKV2-40A0A087WW87 121 aaPredicted RBP18.55■□□□□ 0.56
U2AF1-203ENST00000398137 PGPA6NDG6 321 aa18.55■□□□□ 0.56
U2AF1-203ENST00000398137 IGKV2D-40P01614 121 aaPredicted RBP18.55■□□□□ 0.56
U2AF1-203ENST00000398137 UBE2G2P60604 165 aa18.55■□□□□ 0.56
U2AF1-203ENST00000398137 NUTF2P61970 127 aaKnown RBP18.55■□□□□ 0.56
U2AF1-203ENST00000398137 AMTNQ6UX39 209 aa18.55■□□□□ 0.56
U2AF1-203ENST00000398137 CSN1S1P47710 185 aa18.54■□□□□ 0.56
U2AF1-203ENST00000398137 RPH3ALQ9UNE2 315 aa18.54■□□□□ 0.56
U2AF1-203ENST00000398137 YTHDF2Q9Y5A9 579 aaKnown RBP18.54■□□□□ 0.56
U2AF1-203ENST00000398137 GGTLC3B5MD39 225 aa18.53■□□□□ 0.56
U2AF1-203ENST00000398137 NPIPB6E9PJ23 425 aa18.53■□□□□ 0.56
U2AF1-203ENST00000398137 ERCC8Q13216 396 aa18.53■□□□□ 0.56
U2AF1-203ENST00000398137 Q6ZWC4 215 aa18.53■□□□□ 0.56
U2AF1-203ENST00000398137 CMTM2Q8TAZ6 248 aa18.53■□□□□ 0.56
U2AF1-203ENST00000398137 XCL2Q9UBD3 114 aa18.53■□□□□ 0.56
U2AF1-203ENST00000398137 SLC25A5P05141 298 aaKnown RBP18.52■□□□□ 0.56
U2AF1-203ENST00000398137 GNG5P63218 68 aa18.52■□□□□ 0.56
U2AF1-203ENST00000398137 PPP1R14DQ9NXH3 145 aa18.52■□□□□ 0.56
U2AF1-203ENST00000398137 ZNF705EA8MWA4 302 aaPredicted RBP18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 240.4 ms