RNA–Protein interactions for RNA: ENST00000396386.6

CBX3-202, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-202ENST00000396386 CT45A10P0DMU9 189 aa11.54□□□□□ -0.56
CBX3-202ENST00000396386 PRB4P10163 310 aaPredicted RBP11.54□□□□□ -0.56
CBX3-202ENST00000396386 ESDP10768 282 aa11.54□□□□□ -0.56
CBX3-202ENST00000396386 HBBP68871 147 aa11.54□□□□□ -0.56
CBX3-202ENST00000396386 OR5R1Q8NH85 324 aa11.54□□□□□ -0.56
CBX3-202ENST00000396386 USMG5Q96IX5 58 aa11.54□□□□□ -0.56
CBX3-202ENST00000396386 SLC50A1Q9BRV3 221 aa11.54□□□□□ -0.56
CBX3-202ENST00000396386 RNF223E7ERA6 249 aa11.53□□□□□ -0.56
CBX3-202ENST00000396386 NUPR1O60356 82 aa11.53□□□□□ -0.56
CBX3-202ENST00000396386 SRIP30626 198 aa11.53□□□□□ -0.56
CBX3-202ENST00000396386 LINC00310P59036 64 aa11.53□□□□□ -0.56
CBX3-202ENST00000396386 KRTAP10-9P60411 292 aa11.53□□□□□ -0.56
CBX3-202ENST00000396386 SLAQ13239 276 aa11.53□□□□□ -0.56
CBX3-202ENST00000396386 DEFB113Q30KQ7 82 aa11.53□□□□□ -0.56
CBX3-202ENST00000396386 GDF5OSQ5U4N7 250 aa11.53□□□□□ -0.56
CBX3-202ENST00000396386 PGLYRP4Q96LB8 373 aa11.53□□□□□ -0.56
CBX3-202ENST00000396386 ASCL2Q99929 193 aa11.53□□□□□ -0.56
CBX3-202ENST00000396386 CAMPP49913 170 aa11.53□□□□□ -0.56
CBX3-202ENST00000396386 BLCAPP62952 87 aa11.53□□□□□ -0.56
CBX3-202ENST00000396386 DEFB112Q30KQ8 113 aa11.53□□□□□ -0.56
CBX3-202ENST00000396386 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.53□□□□□ -0.56
CBX3-202ENST00000396386 LRRC75A-AS1Q8N1F1 130 aa11.53□□□□□ -0.56
CBX3-202ENST00000396386 C8orf49Q96NF6 230 aa11.53□□□□□ -0.56
CBX3-202ENST00000396386 ZNF580Q9UK33 172 aa11.53□□□□□ -0.56
CBX3-202ENST00000396386 CR1P17927 2039 aa11.52□□□□□ -0.57
CBX3-202ENST00000396386 IGHV3-66A0A0C4DH42 116 aa11.52□□□□□ -0.57
CBX3-202ENST00000396386 F2Z2F3 143 aa11.52□□□□□ -0.57
CBX3-202ENST00000396386 ZNF207O43670 478 aaKnown RBP11.52□□□□□ -0.57
CBX3-202ENST00000396386 PF4V1P10720 104 aa11.52□□□□□ -0.57
CBX3-202ENST00000396386 SAPCD1Q5SSQ6 148 aa11.52□□□□□ -0.57
CBX3-202ENST00000396386 MAPK1IP1LQ8NDC0 245 aa11.52□□□□□ -0.57
CBX3-202ENST00000396386 U3KQE9 123 aa11.52□□□□□ -0.57
CBX3-202ENST00000396386 IGHG4P01861 327 aa11.51□□□□□ -0.57
CBX3-202ENST00000396386 IGHV4-31P0DP07 118 aa11.51□□□□□ -0.57
CBX3-202ENST00000396386 GZMBP10144 247 aa11.51□□□□□ -0.57
CBX3-202ENST00000396386 HLA-DMBP28068 263 aa11.51□□□□□ -0.57
CBX3-202ENST00000396386 PAFAH1B2P68402 229 aa11.51□□□□□ -0.57
CBX3-202ENST00000396386 Q5PR19 223 aa11.51□□□□□ -0.57
CBX3-202ENST00000396386 UNC79Q9P2D8 2635 aa11.51□□□□□ -0.57
CBX3-202ENST00000396386 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.51□□□□□ -0.57
CBX3-202ENST00000396386 IGHV4-59P01825 116 aa11.51□□□□□ -0.57
CBX3-202ENST00000396386 APOHP02749 345 aaPredicted RBP11.51□□□□□ -0.57
CBX3-202ENST00000396386 IGFL4Q6B9Z1 124 aa11.51□□□□□ -0.57
CBX3-202ENST00000396386 Q6ZS46 218 aa11.51□□□□□ -0.57
CBX3-202ENST00000396386 COX8CQ7Z4L0 72 aa11.51□□□□□ -0.57
CBX3-202ENST00000396386 ANKRD17O75179 2603 aaKnown RBP11.5□□□□□ -0.57
CBX3-202ENST00000396386 IGHV3OR16-13A0A075B7E8 117 aa11.5□□□□□ -0.57
CBX3-202ENST00000396386 IGHV3-49A0A0A0MS15 119 aa11.5□□□□□ -0.57
CBX3-202ENST00000396386 IGHV3-74A0A0B4J1X5 117 aa11.5□□□□□ -0.57
CBX3-202ENST00000396386 NDUFA4O00483 81 aa11.5□□□□□ -0.57
CBX3-202ENST00000396386 IGLV1-40P01703 118 aa11.5□□□□□ -0.57
CBX3-202ENST00000396386 CRIP1P50238 77 aa11.5□□□□□ -0.57
CBX3-202ENST00000396386 CFHR3Q02985 330 aa11.5□□□□□ -0.57
CBX3-202ENST00000396386 Q6AWC8 147 aa11.5□□□□□ -0.57
CBX3-202ENST00000396386 LCN12Q6JVE5 192 aa11.5□□□□□ -0.57
CBX3-202ENST00000396386 KCNS1Q96KK3 526 aa11.5□□□□□ -0.57
CBX3-202ENST00000396386 PRR25Q96S07 402 aa11.5□□□□□ -0.57
CBX3-202ENST00000396386 NDFIP1Q9BT67 221 aa11.5□□□□□ -0.57
CBX3-202ENST00000396386 SSBP4Q9BWG4 385 aaPredicted RBP11.5□□□□□ -0.57
CBX3-202ENST00000396386 A0A0G2JLM5 398 aa11.49□□□□□ -0.57
CBX3-202ENST00000396386 ZNF705FA8MVS1 300 aaPredicted RBP11.49□□□□□ -0.57
CBX3-202ENST00000396386 SH2D1AO60880 128 aa11.49□□□□□ -0.57
CBX3-202ENST00000396386 FSHBP01225 129 aa11.49□□□□□ -0.57
CBX3-202ENST00000396386 TRBV12-3P01733 135 aa11.49□□□□□ -0.57
CBX3-202ENST00000396386 FOXA3P55318 350 aaPredicted RBP11.49□□□□□ -0.57
CBX3-202ENST00000396386 FAM162BQ5T6X4 162 aa11.49□□□□□ -0.57
CBX3-202ENST00000396386 Q8TAT8 98 aa11.49□□□□□ -0.57
CBX3-202ENST00000396386 VGLL1Q99990 258 aa11.49□□□□□ -0.57
CBX3-202ENST00000396386 SAMD10Q9BYL1 202 aa11.49□□□□□ -0.57
CBX3-202ENST00000396386 PRDM13Q9H4Q3 707 aa11.49□□□□□ -0.57
CBX3-202ENST00000396386 SPG11Q96JI7 2443 aa11.49□□□□□ -0.57
CBX3-202ENST00000396386 RBAKDNA6NC62 111 aa11.49□□□□□ -0.57
CBX3-202ENST00000396386 HAX1O00165 279 aa11.49□□□□□ -0.57
CBX3-202ENST00000396386 IGHV3-11P01762 117 aa11.49□□□□□ -0.57
CBX3-202ENST00000396386 MRPL53Q96EL3 112 aaKnown RBP11.49□□□□□ -0.57
CBX3-202ENST00000396386 KLK15Q9H2R5 256 aa11.49□□□□□ -0.57
CBX3-202ENST00000396386 A8MWP6 167 aa11.48□□□□□ -0.57
CBX3-202ENST00000396386 C8orf86Q6ZUL3 223 aa11.48□□□□□ -0.57
CBX3-202ENST00000396386 RNF182Q8N6D2 247 aa11.48□□□□□ -0.57
CBX3-202ENST00000396386 OR4X2Q8NGF9 303 aa11.48□□□□□ -0.57
CBX3-202ENST00000396386 C18orf32Q8TCD1 76 aa11.48□□□□□ -0.57
CBX3-202ENST00000396386 GLMPQ8WWB7 406 aa11.48□□□□□ -0.57
CBX3-202ENST00000396386 A0A1B0GUT8 65 aa11.47□□□□□ -0.57
CBX3-202ENST00000396386 KLF5Q13887 457 aaPredicted RBP11.47□□□□□ -0.57
CBX3-202ENST00000396386 IQCJQ1A5X6 159 aa11.47□□□□□ -0.57
CBX3-202ENST00000396386 C9orf139Q6ZV77 190 aa11.47□□□□□ -0.57
CBX3-202ENST00000396386 RCHY1Q96PM5 261 aa11.47□□□□□ -0.57
CBX3-202ENST00000396386 ALKBH7Q9BT30 221 aaPredicted RBP11.47□□□□□ -0.57
CBX3-202ENST00000396386 NOTCH2Q04721 2471 aa11.47□□□□□ -0.57
CBX3-202ENST00000396386 TMEM189A5PLL7 270 aa11.46□□□□□ -0.57
CBX3-202ENST00000396386 LINC00587B1AMM8 73 aa11.46□□□□□ -0.57
CBX3-202ENST00000396386 RIGQ13278 110 aa11.46□□□□□ -0.57
CBX3-202ENST00000396386 TMEM95Q3KNT9 176 aa11.46□□□□□ -0.57
CBX3-202ENST00000396386 FAM209BQ5JX69 171 aa11.46□□□□□ -0.57
CBX3-202ENST00000396386 UNQ9165/PRO28630Q6UXU0 137 aa11.46□□□□□ -0.57
CBX3-202ENST00000396386 BORCS7Q96B45 105 aa11.46□□□□□ -0.57
CBX3-202ENST00000396386 TRAV8-2A0A0B4J237 113 aa11.46□□□□□ -0.58
CBX3-202ENST00000396386 A0A1B0GW15 77 aa11.46□□□□□ -0.58
CBX3-202ENST00000396386 PRAC2D3DTV9 90 aa11.46□□□□□ -0.58
CBX3-202ENST00000396386 BMI1P35226 326 aa11.46□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 115.7 ms