RNA–Protein interactions for RNA: ENST00000395802.7

VAPB-202, Transcript of VAMP associated protein B and C, humanhuman

TSL 1 (best) BASIC

Gene VAPB, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-202ENST00000395802 TMEM88Q6PEY1 159 aa10.35□□□□□ -0.75
VAPB-202ENST00000395802 MRPL53Q96EL3 112 aaKnown RBP10.35□□□□□ -0.75
VAPB-202ENST00000395802 C17orf77Q96MU5 243 aa10.35□□□□□ -0.75
VAPB-202ENST00000395802 ATG101Q9BSB4 218 aa10.35□□□□□ -0.75
VAPB-202ENST00000395802 NAT8Q9UHE5 227 aa10.35□□□□□ -0.75
VAPB-202ENST00000395802 TRAV2A0A0B4J234 112 aa10.35□□□□□ -0.75
VAPB-202ENST00000395802 FBLL1A6NHQ2 334 aaKnown RBP10.35□□□□□ -0.75
VAPB-202ENST00000395802 SLC17A3O00476 420 aa10.35□□□□□ -0.75
VAPB-202ENST00000395802 AKR1C3P42330 323 aa10.35□□□□□ -0.75
VAPB-202ENST00000395802 SNRPD3P62318 126 aaKnown RBP10.35□□□□□ -0.75
VAPB-202ENST00000395802 CBLN2Q8IUK8 224 aa10.35□□□□□ -0.75
VAPB-202ENST00000395802 EXOC3-AS1Q8N2X6 119 aa10.35□□□□□ -0.75
VAPB-202ENST00000395802 OR2K2Q8NGT1 345 aa10.35□□□□□ -0.75
VAPB-202ENST00000395802 RPS10P5Q9NQ39 176 aa10.35□□□□□ -0.75
VAPB-202ENST00000395802 PEX7O00628 323 aa10.34□□□□□ -0.75
VAPB-202ENST00000395802 TSPAN4O14817 238 aa10.34□□□□□ -0.75
VAPB-202ENST00000395802 SAP30O75446 220 aa10.34□□□□□ -0.75
VAPB-202ENST00000395802 INSL3P51460 131 aa10.34□□□□□ -0.75
VAPB-202ENST00000395802 CNN1P51911 297 aaKnown RBP10.34□□□□□ -0.75
VAPB-202ENST00000395802 TMEM241Q24JQ0 296 aa10.34□□□□□ -0.75
VAPB-202ENST00000395802 LINC00482Q8N8I6 264 aa10.34□□□□□ -0.75
VAPB-202ENST00000395802 MCRIP2Q9BUT9 160 aaKnown RBP10.34□□□□□ -0.75
VAPB-202ENST00000395802 MS4A6AQ9H2W1 248 aa10.34□□□□□ -0.75
VAPB-202ENST00000395802 TRBV20OR9-2A0A075B6H5 130 aa10.33□□□□□ -0.76
VAPB-202ENST00000395802 TCRAP04437 139 aa10.33□□□□□ -0.76
VAPB-202ENST00000395802 DEFB114Q30KQ6 69 aa10.33□□□□□ -0.76
VAPB-202ENST00000395802 C2CD4CQ8TF44 421 aa10.33□□□□□ -0.76
VAPB-202ENST00000395802 IGKV3-7A0A075B6H7 116 aa10.33□□□□□ -0.76
VAPB-202ENST00000395802 EDN2P20800 178 aa10.33□□□□□ -0.76
VAPB-202ENST00000395802 UBE2G1P62253 170 aa10.33□□□□□ -0.76
VAPB-202ENST00000395802 ADAMTSL5Q6ZMM2 481 aa10.33□□□□□ -0.76
VAPB-202ENST00000395802 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.33□□□□□ -0.76
VAPB-202ENST00000395802 SPAG8Q99932 426 aaPredicted RBP10.33□□□□□ -0.76
VAPB-202ENST00000395802 WNK1Q9H4A3 2382 aa10.32□□□□□ -0.76
VAPB-202ENST00000395802 A0A087WWC5 75 aa10.32□□□□□ -0.76
VAPB-202ENST00000395802 OR4C46A6NHA9 309 aa10.32□□□□□ -0.76
VAPB-202ENST00000395802 B4DEV8 164 aa10.32□□□□□ -0.76
VAPB-202ENST00000395802 TAS2R60P59551 318 aa10.32□□□□□ -0.76
VAPB-202ENST00000395802 RPL23P62829 140 aaKnown RBP10.32□□□□□ -0.76
VAPB-202ENST00000395802 PSG3Q16557 428 aa10.32□□□□□ -0.76
VAPB-202ENST00000395802 LCN12Q6JVE5 192 aa10.32□□□□□ -0.76
VAPB-202ENST00000395802 DCANP1Q8TF63 244 aa10.32□□□□□ -0.76
VAPB-202ENST00000395802 FMC1Q96HJ9 113 aa10.32□□□□□ -0.76
VAPB-202ENST00000395802 RBAKDNA6NC62 111 aa10.31□□□□□ -0.76
VAPB-202ENST00000395802 DIRC3C9JPN6 131 aa10.31□□□□□ -0.76
VAPB-202ENST00000395802 SOCS3O14543 225 aa10.31□□□□□ -0.76
VAPB-202ENST00000395802 RPL35P42766 123 aaKnown RBP10.31□□□□□ -0.76
VAPB-202ENST00000395802 ADIRFQ15847 76 aa10.31□□□□□ -0.76
VAPB-202ENST00000395802 LINC01551Q86U37 167 aa10.31□□□□□ -0.76
VAPB-202ENST00000395802 GBGT1Q8N5D6 347 aa10.31□□□□□ -0.76
VAPB-202ENST00000395802 RPH3ALQ9UNE2 315 aa10.31□□□□□ -0.76
VAPB-202ENST00000395802 C9JCJ5 164 aa10.3□□□□□ -0.76
VAPB-202ENST00000395802 CD33P20138 364 aa10.3□□□□□ -0.76
VAPB-202ENST00000395802 CMC4P56277 68 aaPredicted RBP10.3□□□□□ -0.76
VAPB-202ENST00000395802 TMEM183BQ1AE95 376 aa10.3□□□□□ -0.76
VAPB-202ENST00000395802 CD300EQ496F6 205 aaPredicted RBP10.3□□□□□ -0.76
VAPB-202ENST00000395802 TMEM61Q8N0U2 210 aa10.3□□□□□ -0.76
VAPB-202ENST00000395802 TMEM75Q8N9X5 138 aa10.3□□□□□ -0.76
VAPB-202ENST00000395802 SMCO4Q9NRQ5 59 aa10.3□□□□□ -0.76
VAPB-202ENST00000395802 TENM1Q9UKZ4 2725 aa10.3□□□□□ -0.76
VAPB-202ENST00000395802 TRAV8-2A0A0B4J237 113 aa10.3□□□□□ -0.76
VAPB-202ENST00000395802 K7EQG2 157 aa10.3□□□□□ -0.76
VAPB-202ENST00000395802 M0R3E3 92 aa10.3□□□□□ -0.76
VAPB-202ENST00000395802 GNG4P50150 75 aa10.3□□□□□ -0.76
VAPB-202ENST00000395802 C9orf66Q5T8R8 295 aa10.3□□□□□ -0.76
VAPB-202ENST00000395802 GOLT1AQ6ZVE7 132 aa10.3□□□□□ -0.76
VAPB-202ENST00000395802 WFDC3Q8IUB2 231 aa10.3□□□□□ -0.76
VAPB-202ENST00000395802 ZNF738Q8NE65 137 aa10.3□□□□□ -0.76
VAPB-202ENST00000395802 SMIM12Q96EX1 92 aa10.3□□□□□ -0.76
VAPB-202ENST00000395802 GPR61Q9BZJ8 451 aa10.3□□□□□ -0.76
VAPB-202ENST00000395802 TUBA4BQ9H853 241 aa10.3□□□□□ -0.76
VAPB-202ENST00000395802 KLF12Q9Y4X4 402 aa10.3□□□□□ -0.76
VAPB-202ENST00000395802 PGPEP1LA6NFU8 196 aa10.29□□□□□ -0.76
VAPB-202ENST00000395802 IGLV1-51P01701 117 aa10.29□□□□□ -0.76
VAPB-202ENST00000395802 TFPI2P48307 235 aa10.29□□□□□ -0.76
VAPB-202ENST00000395802 GNG5P63218 68 aa10.29□□□□□ -0.76
VAPB-202ENST00000395802 LY96Q9Y6Y9 160 aa10.29□□□□□ -0.76
VAPB-202ENST00000395802 FBN1P35555 2871 aaKnown RBP10.29□□□□□ -0.76
VAPB-202ENST00000395802 TRBV6-1A0A0K0K1D8 114 aa10.28□□□□□ -0.76
VAPB-202ENST00000395802 RNF212Q495C1 297 aa10.28□□□□□ -0.76
VAPB-202ENST00000395802 RNF182Q8N6D2 247 aa10.28□□□□□ -0.76
VAPB-202ENST00000395802 WFDC9Q8NEX5 89 aa10.28□□□□□ -0.76
VAPB-202ENST00000395802 OR10J6PQ8NGY7 276 aa10.28□□□□□ -0.76
VAPB-202ENST00000395802 ISOC2Q96AB3 205 aa10.28□□□□□ -0.76
VAPB-202ENST00000395802 TMEM242Q9NWH2 141 aa10.28□□□□□ -0.76
VAPB-202ENST00000395802 IGFL4Q6B9Z1 124 aa10.28□□□□□ -0.76
VAPB-202ENST00000395802 IGF2BP2-AS1Q96M15 143 aa10.28□□□□□ -0.76
VAPB-202ENST00000395802 BIN3Q9NQY0 253 aa10.28□□□□□ -0.76
VAPB-202ENST00000395802 ZFP30Q9Y2G7 519 aa10.28□□□□□ -0.76
VAPB-202ENST00000395802 CENPWQ5EE01 88 aa10.27□□□□□ -0.77
VAPB-202ENST00000395802 SAPCD1Q5SSQ6 148 aa10.27□□□□□ -0.77
VAPB-202ENST00000395802 TMEM78Q5T7P6 136 aa10.27□□□□□ -0.77
VAPB-202ENST00000395802 OCC1Q8TAD7 63 aa10.27□□□□□ -0.77
VAPB-202ENST00000395802 NDFIP1Q9BT67 221 aa10.27□□□□□ -0.77
VAPB-202ENST00000395802 AURKAIP1Q9NWT8 199 aaPredicted RBP10.27□□□□□ -0.77
VAPB-202ENST00000395802 COL6A5A8TX70 2615 aa10.27□□□□□ -0.77
VAPB-202ENST00000395802 ZNF705FA8MVS1 300 aaPredicted RBP10.26□□□□□ -0.77
VAPB-202ENST00000395802 FLI1Q01543 452 aaPredicted RBP10.26□□□□□ -0.77
VAPB-202ENST00000395802 PSMG4Q5JS54 123 aa10.26□□□□□ -0.77
VAPB-202ENST00000395802 EBLN2Q6P2I7 272 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms