RNA–Protein interactions for RNA: ENST00000395454.6

SCAF11-204, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF11, Length 1,931 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-204ENST00000395454 C1orf194Q5T5A4 169 aa11.59□□□□□ -0.55
SCAF11-204ENST00000395454 LCNL1Q6ZST4 164 aa11.59□□□□□ -0.55
SCAF11-204ENST00000395454 Q86TA4 180 aa11.59□□□□□ -0.55
SCAF11-204ENST00000395454 C11orf44Q8N8P7 122 aa11.59□□□□□ -0.55
SCAF11-204ENST00000395454 OR4X2Q8NGF9 303 aa11.59□□□□□ -0.55
SCAF11-204ENST00000395454 ZNF492Q9P255 531 aa11.59□□□□□ -0.55
SCAF11-204ENST00000395454 SERTM2A0A1B0GWG4 89 aa11.58□□□□□ -0.55
SCAF11-204ENST00000395454 SMIM27A0A1W2PRY6 76 aa11.58□□□□□ -0.55
SCAF11-204ENST00000395454 TRGC1P0CF51 173 aa11.58□□□□□ -0.55
SCAF11-204ENST00000395454 PSG9Q00887 426 aa11.58□□□□□ -0.55
SCAF11-204ENST00000395454 CMTM2Q8TAZ6 248 aa11.58□□□□□ -0.55
SCAF11-204ENST00000395454 SMAD5-AS1Q9Y6J3 95 aa11.58□□□□□ -0.55
SCAF11-204ENST00000395454 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.58□□□□□ -0.56
SCAF11-204ENST00000395454 MGST1P10620 155 aaKnown RBP11.58□□□□□ -0.56
SCAF11-204ENST00000395454 PSMB8P28062 276 aa11.58□□□□□ -0.56
SCAF11-204ENST00000395454 SMUG1Q53HV7 270 aa11.58□□□□□ -0.56
SCAF11-204ENST00000395454 KLK15Q9H2R5 256 aa11.58□□□□□ -0.56
SCAF11-204ENST00000395454 HOXA5P20719 270 aa11.57□□□□□ -0.56
SCAF11-204ENST00000395454 RIPPLY3P57055 190 aa11.57□□□□□ -0.56
SCAF11-204ENST00000395454 TPPP2P59282 170 aa11.57□□□□□ -0.56
SCAF11-204ENST00000395454 FABP9Q0Z7S8 132 aa11.57□□□□□ -0.56
SCAF11-204ENST00000395454 KHDC1LQ5JSQ8 128 aa11.57□□□□□ -0.56
SCAF11-204ENST00000395454 HIST2H2BDQ6DRA6 164 aa11.57□□□□□ -0.56
SCAF11-204ENST00000395454 TMEM183AQ8IXX5 376 aa11.57□□□□□ -0.56
SCAF11-204ENST00000395454 OR8I2Q8N0Y5 310 aa11.57□□□□□ -0.56
SCAF11-204ENST00000395454 NHLRC2Q8NBF2 726 aa11.57□□□□□ -0.56
SCAF11-204ENST00000395454 WIPF2Q8TF74 440 aaPredicted RBP11.57□□□□□ -0.56
SCAF11-204ENST00000395454 C19orf71A6NCJ1 209 aa11.56□□□□□ -0.56
SCAF11-204ENST00000395454 DIRC3C9JPN6 131 aa11.56□□□□□ -0.56
SCAF11-204ENST00000395454 ELANEP08246 267 aa11.56□□□□□ -0.56
SCAF11-204ENST00000395454 FOXE3Q13461 319 aa11.56□□□□□ -0.56
SCAF11-204ENST00000395454 CT83Q5H943 113 aa11.56□□□□□ -0.56
SCAF11-204ENST00000395454 COA6Q5JTJ3 125 aaKnown RBP11.56□□□□□ -0.56
SCAF11-204ENST00000395454 WFDC12Q8WWY7 111 aa11.56□□□□□ -0.56
SCAF11-204ENST00000395454 AAMDCQ9H7C9 122 aa11.56□□□□□ -0.56
SCAF11-204ENST00000395454 RPLP1P05386 114 aaKnown RBP11.56□□□□□ -0.56
SCAF11-204ENST00000395454 CD28P10747 220 aa11.56□□□□□ -0.56
SCAF11-204ENST00000395454 GOLT1AQ6ZVE7 132 aa11.56□□□□□ -0.56
SCAF11-204ENST00000395454 NUDT10Q8NFP7 164 aa11.56□□□□□ -0.56
SCAF11-204ENST00000395454 NUDT11Q96G61 164 aa11.56□□□□□ -0.56
SCAF11-204ENST00000395454 A0A0G2JLM5 398 aa11.55□□□□□ -0.56
SCAF11-204ENST00000395454 FBLL1A6NHQ2 334 aaKnown RBP11.55□□□□□ -0.56
SCAF11-204ENST00000395454 NPIPB6E9PJ23 425 aa11.55□□□□□ -0.56
SCAF11-204ENST00000395454 NDUFA4O00483 81 aa11.55□□□□□ -0.56
SCAF11-204ENST00000395454 TCTEX1D4Q5JR98 221 aa11.55□□□□□ -0.56
SCAF11-204ENST00000395454 FAM209BQ5JX69 171 aa11.55□□□□□ -0.56
SCAF11-204ENST00000395454 COX8CQ7Z4L0 72 aa11.55□□□□□ -0.56
SCAF11-204ENST00000395454 METTL26Q96S19 204 aa11.55□□□□□ -0.56
SCAF11-204ENST00000395454 GNB4Q9HAV0 340 aa11.55□□□□□ -0.56
SCAF11-204ENST00000395454 RPH3ALQ9UNE2 315 aa11.55□□□□□ -0.56
SCAF11-204ENST00000395454 ZFP30Q9Y2G7 519 aa11.55□□□□□ -0.56
SCAF11-204ENST00000395454 STAB1Q9NY15 2570 aa11.55□□□□□ -0.56
SCAF11-204ENST00000395454 IGHV3-35A0A0C4DH35 117 aa11.54□□□□□ -0.56
SCAF11-204ENST00000395454 K7EQM0 130 aa11.54□□□□□ -0.56
SCAF11-204ENST00000395454 ARL3P36405 182 aa11.54□□□□□ -0.56
SCAF11-204ENST00000395454 MEOX2P50222 304 aa11.54□□□□□ -0.56
SCAF11-204ENST00000395454 PSG3Q16557 428 aa11.54□□□□□ -0.56
SCAF11-204ENST00000395454 C16orf54Q6UWD8 224 aa11.54□□□□□ -0.56
SCAF11-204ENST00000395454 GRAMD2BQ96HH9 432 aa11.54□□□□□ -0.56
SCAF11-204ENST00000395454 ZNF331Q9NQX6 463 aaPredicted RBP11.54□□□□□ -0.56
SCAF11-204ENST00000395454 TRAV8-1A0A0A6YYK1 113 aa11.54□□□□□ -0.56
SCAF11-204ENST00000395454 ZNF705GA8MUZ8 300 aaPredicted RBP11.54□□□□□ -0.56
SCAF11-204ENST00000395454 M0R3E3 92 aa11.54□□□□□ -0.56
SCAF11-204ENST00000395454 CDX1P47902 265 aaPredicted RBP11.54□□□□□ -0.56
SCAF11-204ENST00000395454 COX19Q49B96 90 aa11.54□□□□□ -0.56
SCAF11-204ENST00000395454 ZNF785A8K8V0 405 aa11.53□□□□□ -0.56
SCAF11-204ENST00000395454 GATCO43716 136 aaKnown RBP11.53□□□□□ -0.56
SCAF11-204ENST00000395454 KRTAP10-3P60369 221 aa11.53□□□□□ -0.56
SCAF11-204ENST00000395454 RPL19P84098 196 aaKnown RBP11.53□□□□□ -0.56
SCAF11-204ENST00000395454 RNF152Q8N8N0 203 aa11.53□□□□□ -0.56
SCAF11-204ENST00000395454 TSKUQ8WUA8 353 aa11.53□□□□□ -0.56
SCAF11-204ENST00000395454 SGK494Q96LW2 274 aa11.53□□□□□ -0.56
SCAF11-204ENST00000395454 CITED2Q99967 270 aaPredicted RBP11.53□□□□□ -0.56
SCAF11-204ENST00000395454 TRBV12-3P01733 135 aa11.52□□□□□ -0.56
SCAF11-204ENST00000395454 IGHV3-11P01762 117 aa11.52□□□□□ -0.56
SCAF11-204ENST00000395454 S100A8P05109 93 aa11.52□□□□□ -0.56
SCAF11-204ENST00000395454 RASL11AQ6T310 242 aa11.52□□□□□ -0.56
SCAF11-204ENST00000395454 C12orf54Q6X4T0 127 aa11.52□□□□□ -0.56
SCAF11-204ENST00000395454 LINC00322Q6ZN03 302 aaPredicted RBP11.52□□□□□ -0.56
SCAF11-204ENST00000395454 SLC50A1Q9BRV3 221 aa11.52□□□□□ -0.56
SCAF11-204ENST00000395454 GNB1LQ9BYB4 327 aa11.52□□□□□ -0.56
SCAF11-204ENST00000395454 PSG8Q9UQ74 426 aa11.52□□□□□ -0.56
SCAF11-204ENST00000395454 TRRAPQ9Y4A5 3859 aa11.52□□□□□ -0.57
SCAF11-204ENST00000395454 IGHV3OR16-8A0A075B7F1 116 aa11.52□□□□□ -0.57
SCAF11-204ENST00000395454 IZUMO1RA6ND01 250 aa11.52□□□□□ -0.57
SCAF11-204ENST00000395454 MT-ND6P03923 174 aa11.52□□□□□ -0.57
SCAF11-204ENST00000395454 NDUFA6P56556 154 aa11.52□□□□□ -0.57
SCAF11-204ENST00000395454 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.52□□□□□ -0.57
SCAF11-204ENST00000395454 LINC00518Q8N0U6 118 aa11.52□□□□□ -0.57
SCAF11-204ENST00000395454 C3orf56Q8N813 242 aa11.52□□□□□ -0.57
SCAF11-204ENST00000395454 MYOZ3Q8TDC0 251 aa11.52□□□□□ -0.57
SCAF11-204ENST00000395454 MDFIQ99750 246 aa11.52□□□□□ -0.57
SCAF11-204ENST00000395454 RPP21Q9H633 154 aaKnown RBP11.52□□□□□ -0.57
SCAF11-204ENST00000395454 TRAPPC1Q9Y5R8 145 aa11.52□□□□□ -0.57
SCAF11-204ENST00000395454 A0A1W2PRX2 142 aa11.51□□□□□ -0.57
SCAF11-204ENST00000395454 FAM231BA6NCW3 169 aa11.51□□□□□ -0.57
SCAF11-204ENST00000395454 IFITM10A6NMD0 228 aa11.51□□□□□ -0.57
SCAF11-204ENST00000395454 CSN1S1P47710 185 aa11.51□□□□□ -0.57
SCAF11-204ENST00000395454 OR4B1Q8NGF8 309 aa11.51□□□□□ -0.57
SCAF11-204ENST00000395454 GLMPQ8WWB7 406 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms