RNA–Protein interactions for RNA: ENST00000394611.6

RTN4-206, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,161 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-206ENST00000394611 A0A0U1RRA0 63 aa7.08□□□□□ -1.28
RTN4-206ENST00000394611 FAM90A27PA6NNH2 459 aa7.08□□□□□ -1.28
RTN4-206ENST00000394611 HBDP02042 147 aa7.08□□□□□ -1.28
RTN4-206ENST00000394611 FXYD2P54710 66 aa7.08□□□□□ -1.28
RTN4-206ENST00000394611 MRPL32Q9BYC8 188 aaKnown RBP7.08□□□□□ -1.28
RTN4-206ENST00000394611 TET2Q6N021 2002 aaPredicted RBP7.08□□□□□ -1.28
RTN4-206ENST00000394611 A0A1W2PPI3 338 aa7.08□□□□□ -1.28
RTN4-206ENST00000394611 HSD52Q0P140 79 aa7.08□□□□□ -1.28
RTN4-206ENST00000394611 C19orf24Q9BVV8 132 aa7.08□□□□□ -1.28
RTN4-206ENST00000394611 H0YJW9 148 aa7.07□□□□□ -1.28
RTN4-206ENST00000394611 EFNA4P52798 201 aa7.07□□□□□ -1.28
RTN4-206ENST00000394611 PRR20EP86478 221 aa7.07□□□□□ -1.28
RTN4-206ENST00000394611 PRR20CP86479 221 aa7.07□□□□□ -1.28
RTN4-206ENST00000394611 PRR20DP86480 221 aa7.07□□□□□ -1.28
RTN4-206ENST00000394611 PRR20BP86481 221 aa7.07□□□□□ -1.28
RTN4-206ENST00000394611 PRR20AP86496 221 aa7.07□□□□□ -1.28
RTN4-206ENST00000394611 NEGR1Q7Z3B1 354 aa7.07□□□□□ -1.28
RTN4-206ENST00000394611 RITA1Q96K30 269 aa7.07□□□□□ -1.28
RTN4-206ENST00000394611 FN1P02751 2386 aaKnown RBP7.07□□□□□ -1.28
RTN4-206ENST00000394611 POLQO75417 2590 aa7.07□□□□□ -1.28
RTN4-206ENST00000394611 TRBV6-6A0A0A6YYG2 114 aa7.07□□□□□ -1.28
RTN4-206ENST00000394611 ERVK11-1P61568 191 aa7.07□□□□□ -1.28
RTN4-206ENST00000394611 LYPD2Q6UXB3 125 aa7.07□□□□□ -1.28
RTN4-206ENST00000394611 TTC9CQ8N5M4 171 aa7.07□□□□□ -1.28
RTN4-206ENST00000394611 OR11H12B2RN74 326 aa7.07□□□□□ -1.28
RTN4-206ENST00000394611 ERCC8Q13216 396 aa7.07□□□□□ -1.28
RTN4-206ENST00000394611 TMEM170BQ5T4T1 132 aa7.07□□□□□ -1.28
RTN4-206ENST00000394611 OR11H1Q8NG94 326 aa7.07□□□□□ -1.28
RTN4-206ENST00000394611 OR11H2Q8NH07 326 aa7.07□□□□□ -1.28
RTN4-206ENST00000394611 CHAC1Q9BUX1 264 aa7.07□□□□□ -1.28
RTN4-206ENST00000394611 COL12A1Q99715 3063 aa7.07□□□□□ -1.28
RTN4-206ENST00000394611 VWC2LB2RUY7 222 aa7.06□□□□□ -1.28
RTN4-206ENST00000394611 SRRM5B3KS81 715 aa7.06□□□□□ -1.28
RTN4-206ENST00000394611 C15orf65H3BRN8 121 aa7.06□□□□□ -1.28
RTN4-206ENST00000394611 NDUFS8O00217 210 aa7.06□□□□□ -1.28
RTN4-206ENST00000394611 SMAD7O15105 426 aaKnown RBP7.06□□□□□ -1.28
RTN4-206ENST00000394611 NPYP01303 97 aa7.06□□□□□ -1.28
RTN4-206ENST00000394611 SRD5A1P18405 259 aa7.06□□□□□ -1.28
RTN4-206ENST00000394611 SEC11AP67812 179 aa7.06□□□□□ -1.28
RTN4-206ENST00000394611 CENPVQ7Z7K6 275 aaPredicted RBP7.06□□□□□ -1.28
RTN4-206ENST00000394611 TMEM158Q8WZ71 300 aa7.06□□□□□ -1.28
RTN4-206ENST00000394611 SPENQ96T58 3664 aaKnown RBP7.06□□□□□ -1.28
RTN4-206ENST00000394611 IGKV3D-20A0A0C4DH25 116 aa7.06□□□□□ -1.28
RTN4-206ENST00000394611 PATE2Q6UY27 113 aa7.06□□□□□ -1.28
RTN4-206ENST00000394611 C11orf53Q8IXP5 236 aa7.06□□□□□ -1.28
RTN4-206ENST00000394611 PTH2Q96A98 100 aa7.06□□□□□ -1.28
RTN4-206ENST00000394611 SIGLEC8Q9NYZ4 499 aa7.06□□□□□ -1.28
RTN4-206ENST00000394611 C9orf118A6NHY6 69 aa7.06□□□□□ -1.28
RTN4-206ENST00000394611 IGLV2-8P01709 118 aa7.06□□□□□ -1.28
RTN4-206ENST00000394611 COX8AP10176 69 aa7.06□□□□□ -1.28
RTN4-206ENST00000394611 RNF182Q8N6D2 247 aa7.06□□□□□ -1.28
RTN4-206ENST00000394611 RAX2Q96IS3 184 aa7.06□□□□□ -1.28
RTN4-206ENST00000394611 UBTD1Q9HAC8 227 aa7.06□□□□□ -1.28
RTN4-206ENST00000394611 SS18L2Q9UHA2 77 aa7.06□□□□□ -1.28
RTN4-206ENST00000394611 TRGV8A0A0C4DH27 118 aa7.05□□□□□ -1.28
RTN4-206ENST00000394611 K7ENP7 123 aa7.05□□□□□ -1.28
RTN4-206ENST00000394611 IGLC1P0CG04 106 aa7.05□□□□□ -1.28
RTN4-206ENST00000394611 SRSF7Q16629 238 aaKnown RBP eCLIP7.05□□□□□ -1.28
RTN4-206ENST00000394611 GAGE13Q4V321 117 aa7.05□□□□□ -1.28
RTN4-206ENST00000394611 C16orf54Q6UWD8 224 aa7.05□□□□□ -1.28
RTN4-206ENST00000394611 OR5AN1Q8NGI8 311 aa7.05□□□□□ -1.28
RTN4-206ENST00000394611 CHCHD1Q96BP2 118 aaKnown RBP7.05□□□□□ -1.28
RTN4-206ENST00000394611 SLC25A39Q9BZJ4 359 aaPredicted RBP7.05□□□□□ -1.28
RTN4-206ENST00000394611 TMEM14BQ9NUH8 114 aa7.05□□□□□ -1.28
RTN4-206ENST00000394611 IGHV4-39P01824 125 aa7.05□□□□□ -1.28
RTN4-206ENST00000394611 C11orf52Q96A22 123 aa7.05□□□□□ -1.28
RTN4-206ENST00000394611 FXYD5Q96DB9 178 aa7.05□□□□□ -1.28
RTN4-206ENST00000394611 TRAV17A0A0B4J275 112 aa7.05□□□□□ -1.28
RTN4-206ENST00000394611 A0A1W2PPM0 123 aa7.05□□□□□ -1.28
RTN4-206ENST00000394611 SPINK8P0C7L1 97 aa7.05□□□□□ -1.28
RTN4-206ENST00000394611 TMPRSS3P57727 454 aa7.05□□□□□ -1.28
RTN4-206ENST00000394611 Q86TA4 180 aa7.05□□□□□ -1.28
RTN4-206ENST00000394611 SYT8Q8NBV8 401 aa7.05□□□□□ -1.28
RTN4-206ENST00000394611 FMC1Q96HJ9 113 aa7.05□□□□□ -1.28
RTN4-206ENST00000394611 PGPEP1Q9NXJ5 209 aa7.05□□□□□ -1.28
RTN4-206ENST00000394611 TRBV20-1A0A075B6N2 111 aa7.05□□□□□ -1.28
RTN4-206ENST00000394611 K7EP34 96 aa7.05□□□□□ -1.28
RTN4-206ENST00000394611 NDPQ00604 133 aa7.05□□□□□ -1.28
RTN4-206ENST00000394611 ZNF747Q9BV97 191 aa7.05□□□□□ -1.28
RTN4-206ENST00000394611 DSCAMO60469 2012 aa7.04□□□□□ -1.28
RTN4-206ENST00000394611 TRAV26-1A0A087WT03 109 aa7.04□□□□□ -1.28
RTN4-206ENST00000394611 TRAV8-2A0A0B4J237 113 aa7.04□□□□□ -1.28
RTN4-206ENST00000394611 GAGE12HA6NDE8 117 aa7.04□□□□□ -1.28
RTN4-206ENST00000394611 TMEM8BA6NDV4 472 aa7.04□□□□□ -1.28
RTN4-206ENST00000394611 Q8N7P7 452 aa7.04□□□□□ -1.28
RTN4-206ENST00000394611 CPAMD8Q8IZJ3 1885 aa7.04□□□□□ -1.28
RTN4-206ENST00000394611 BSNQ9UPA5 3926 aa7.04□□□□□ -1.28
RTN4-206ENST00000394611 TRAV12-3A0A0B4J271 114 aa7.04□□□□□ -1.28
RTN4-206ENST00000394611 K7EM74 188 aa7.04□□□□□ -1.28
RTN4-206ENST00000394611 TOMM40O96008 361 aa7.04□□□□□ -1.28
RTN4-206ENST00000394611 KLRD1Q13241 179 aa7.04□□□□□ -1.28
RTN4-206ENST00000394611 C17orf58Q2M2W7 97 aa7.04□□□□□ -1.28
RTN4-206ENST00000394611 NGBQ9NPG2 151 aa7.04□□□□□ -1.28
RTN4-206ENST00000394611 IGHV1-46P01743 117 aa7.04□□□□□ -1.28
RTN4-206ENST00000394611 IGKCP01834 107 aa7.04□□□□□ -1.28
RTN4-206ENST00000394611 PAX1P15863 534 aa7.04□□□□□ -1.28
RTN4-206ENST00000394611 MSMPQ1L6U9 139 aa7.04□□□□□ -1.28
RTN4-206ENST00000394611 ANAPC13Q9BS18 74 aa7.04□□□□□ -1.28
RTN4-206ENST00000394611 GEMIN7Q9H840 131 aaKnown RBP7.04□□□□□ -1.28
RTN4-206ENST00000394611 SCRT2Q9NQ03 307 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms