RNA–Protein interactions for RNA: ENST00000384709.1

RNU6-541P-201, Transcript of RNA, U6 small nuclear 541, pseudogene, humanhuman

BASIC

Gene RNU6-541P, Length 110 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-541P-201ENST00000384709 IGHV3-30P01768 117 aa-0.42□□□□□ -2.48
RNU6-541P-201ENST00000384709 CRHP06850 196 aa-0.42□□□□□ -2.48
RNU6-541P-201ENST00000384709 RPS17P08708 135 aaKnown RBP-0.42□□□□□ -2.48
RNU6-541P-201ENST00000384709 IGHV3-30-5P0DP03 117 aa-0.42□□□□□ -2.48
RNU6-541P-201ENST00000384709 CEBPGP53567 150 aa-0.42□□□□□ -2.48
RNU6-541P-201ENST00000384709 RPL37AP61513 92 aaKnown RBP-0.42□□□□□ -2.48
RNU6-541P-201ENST00000384709 SPINK13Q1W4C9 94 aa-0.42□□□□□ -2.48
RNU6-541P-201ENST00000384709 FOXI2Q6ZQN5 318 aa-0.42□□□□□ -2.48
RNU6-541P-201ENST00000384709 GOLT1AQ6ZVE7 132 aa-0.42□□□□□ -2.48
RNU6-541P-201ENST00000384709 S100A7AQ86SG5 101 aa-0.42□□□□□ -2.48
RNU6-541P-201ENST00000384709 Q86TA4 180 aa-0.42□□□□□ -2.48
RNU6-541P-201ENST00000384709 CHCHD1Q96BP2 118 aaKnown RBP-0.42□□□□□ -2.48
RNU6-541P-201ENST00000384709 ARL5BQ96KC2 179 aa-0.42□□□□□ -2.48
RNU6-541P-201ENST00000384709 LPAR5Q9H1C0 372 aa-0.42□□□□□ -2.48
RNU6-541P-201ENST00000384709 BOKQ9UMX3 212 aaPredicted RBP-0.42□□□□□ -2.48
RNU6-541P-201ENST00000384709 SLC22A13Q9Y226 551 aa-0.42□□□□□ -2.48
RNU6-541P-201ENST00000384709 ASB4Q9Y574 426 aa-0.42□□□□□ -2.48
RNU6-541P-201ENST00000384709 CHD9Q3L8U1 2897 aa-0.43□□□□□ -2.48
RNU6-541P-201ENST00000384709 RREB1Q92766 1687 aa-0.43□□□□□ -2.48
RNU6-541P-201ENST00000384709 TNS1Q9HBL0 1735 aaKnown RBP-0.43□□□□□ -2.48
RNU6-541P-201ENST00000384709 TRAV5A0A0B4J249 113 aa-0.43□□□□□ -2.48
RNU6-541P-201ENST00000384709 C9orf170A2RU37 121 aa-0.43□□□□□ -2.48
RNU6-541P-201ENST00000384709 PIAS1O75925 651 aa-0.43□□□□□ -2.48
RNU6-541P-201ENST00000384709 CST2P09228 141 aa-0.43□□□□□ -2.48
RNU6-541P-201ENST00000384709 ANGPTL5Q86XS5 388 aa-0.43□□□□□ -2.48
RNU6-541P-201ENST00000384709 ZHX1-C8orf76Q96EF9 292 aa-0.43□□□□□ -2.48
RNU6-541P-201ENST00000384709 SIGMAR1Q99720 223 aa-0.43□□□□□ -2.48
RNU6-541P-201ENST00000384709 NMNAT1Q9HAN9 279 aaPredicted RBP-0.43□□□□□ -2.48
RNU6-541P-201ENST00000384709 POPDC3Q9HBV1 291 aa-0.43□□□□□ -2.48
RNU6-541P-201ENST00000384709 CAMSAP2Q08AD1 1489 aa-0.43□□□□□ -2.48
RNU6-541P-201ENST00000384709 TENM4Q6N022 2769 aa-0.44□□□□□ -2.48
RNU6-541P-201ENST00000384709 CD109Q6YHK3 1445 aa-0.44□□□□□ -2.48
RNU6-541P-201ENST00000384709 ODAMA1E959 279 aa-0.44□□□□□ -2.48
RNU6-541P-201ENST00000384709 LY6G6CO95867 125 aa-0.44□□□□□ -2.48
RNU6-541P-201ENST00000384709 CAV3P56539 151 aa-0.44□□□□□ -2.48
RNU6-541P-201ENST00000384709 ERVS71-1P61550 626 aa-0.44□□□□□ -2.48
RNU6-541P-201ENST00000384709 HSPE1P61604 102 aaKnown RBP-0.44□□□□□ -2.48
RNU6-541P-201ENST00000384709 MIR22HGQ0VDD5 57 aa-0.44□□□□□ -2.48
RNU6-541P-201ENST00000384709 Q5BKY6 102 aa-0.44□□□□□ -2.48
RNU6-541P-201ENST00000384709 DEFB132Q7Z7B7 95 aa-0.44□□□□□ -2.48
RNU6-541P-201ENST00000384709 LINC00269Q8N2A0 174 aa-0.44□□□□□ -2.48
RNU6-541P-201ENST00000384709 OR10X1Q8NGY0 326 aa-0.44□□□□□ -2.48
RNU6-541P-201ENST00000384709 LIMD2Q9BT23 127 aa-0.44□□□□□ -2.48
RNU6-541P-201ENST00000384709 CACYBPQ9HB71 228 aaKnown RBP-0.44□□□□□ -2.48
RNU6-541P-201ENST00000384709 OPTCQ9UBM4 332 aa-0.44□□□□□ -2.48
RNU6-541P-201ENST00000384709 HUWE1Q7Z6Z7 4374 aaKnown RBP-0.44□□□□□ -2.48
RNU6-541P-201ENST00000384709 CACNA1AO00555 2505 aa-0.45□□□□□ -2.48
RNU6-541P-201ENST00000384709 GPR31O00270 319 aa-0.45□□□□□ -2.48
RNU6-541P-201ENST00000384709 KLRD1Q13241 179 aa-0.45□□□□□ -2.48
RNU6-541P-201ENST00000384709 LIN52Q52LA3 116 aa-0.45□□□□□ -2.48
RNU6-541P-201ENST00000384709 GLYATL3Q5SZD4 288 aa-0.45□□□□□ -2.48
RNU6-541P-201ENST00000384709 LRRC18Q8N456 261 aa-0.45□□□□□ -2.48
RNU6-541P-201ENST00000384709 BTF3L4Q96K17 158 aa-0.45□□□□□ -2.48
RNU6-541P-201ENST00000384709 PARVGQ9HBI0 331 aa-0.45□□□□□ -2.48
RNU6-541P-201ENST00000384709 PROK2Q9HC23 129 aa-0.45□□□□□ -2.48
RNU6-541P-201ENST00000384709 UHRF1BP1Q6BDS2 1440 aa-0.46□□□□□ -2.48
RNU6-541P-201ENST00000384709 NFYBP25208 207 aa-0.46□□□□□ -2.48
RNU6-541P-201ENST00000384709 XAF1Q6GPH4 301 aa-0.46□□□□□ -2.48
RNU6-541P-201ENST00000384709 ZCCHC23Q6ZST2 131 aa-0.46□□□□□ -2.48
RNU6-541P-201ENST00000384709 ZCCHC11Q5TAX3 1644 aaKnown RBP-0.46□□□□□ -2.48
RNU6-541P-201ENST00000384709 KIAA0100Q14667 2235 aaKnown RBP-0.46□□□□□ -2.48
RNU6-541P-201ENST00000384709 KIAA1107Q9UPP5 1409 aa-0.47□□□□□ -2.48
RNU6-541P-201ENST00000384709 A0A096LPI6 279 aa-0.47□□□□□ -2.48
RNU6-541P-201ENST00000384709 SPINK1P00995 79 aa-0.47□□□□□ -2.48
RNU6-541P-201ENST00000384709 IFNA4P05014 189 aa-0.47□□□□□ -2.48
RNU6-541P-201ENST00000384709 IDO1P14902 403 aa-0.47□□□□□ -2.48
RNU6-541P-201ENST00000384709 CDKN2CP42773 168 aa-0.47□□□□□ -2.48
RNU6-541P-201ENST00000384709 INSL3P51460 131 aa-0.47□□□□□ -2.48
RNU6-541P-201ENST00000384709 ARPP19P56211 112 aa-0.47□□□□□ -2.48
RNU6-541P-201ENST00000384709 PHF5AQ7RTV0 110 aaKnown RBP-0.47□□□□□ -2.48
RNU6-541P-201ENST00000384709 OR4K15Q8NH41 348 aa-0.47□□□□□ -2.48
RNU6-541P-201ENST00000384709 PLEKHB2Q96CS7 222 aa-0.47□□□□□ -2.48
RNU6-541P-201ENST00000384709 CST11Q9H112 138 aa-0.47□□□□□ -2.48
RNU6-541P-201ENST00000384709 RTL9Q8NET4 1388 aa-0.47□□□□□ -2.49
RNU6-541P-201ENST00000384709 DUXBA0A1W2PPF3 345 aa-0.48□□□□□ -2.49
RNU6-541P-201ENST00000384709 RER1O15258 196 aa-0.48□□□□□ -2.49
RNU6-541P-201ENST00000384709 HMGB3O15347 200 aaKnown RBP-0.48□□□□□ -2.49
RNU6-541P-201ENST00000384709 LYRM1O43325 122 aa-0.48□□□□□ -2.49
RNU6-541P-201ENST00000384709 CST8O60676 142 aa-0.48□□□□□ -2.49
RNU6-541P-201ENST00000384709 CTXN2P0C2S0 81 aa-0.48□□□□□ -2.49
RNU6-541P-201ENST00000384709 TAF1AQ15573 450 aaPredicted RBP-0.48□□□□□ -2.49
RNU6-541P-201ENST00000384709 FKBP1CQ5VVH2 108 aa-0.48□□□□□ -2.49
RNU6-541P-201ENST00000384709 CCL4L1Q8NHW4 92 aa-0.48□□□□□ -2.49
RNU6-541P-201ENST00000384709 ZNF714Q96N38 554 aa-0.48□□□□□ -2.49
RNU6-541P-201ENST00000384709 GPX7Q96SL4 187 aaPredicted RBP-0.48□□□□□ -2.49
RNU6-541P-201ENST00000384709 MAP1LC3BQ9GZQ8 125 aa-0.48□□□□□ -2.49
RNU6-541P-201ENST00000384709 ARMC1Q9NVT9 282 aa-0.48□□□□□ -2.49
RNU6-541P-201ENST00000384709 PARP14Q460N5 1801 aa-0.48□□□□□ -2.49
RNU6-541P-201ENST00000384709 ADGRL3Q9HAR2 1447 aa-0.48□□□□□ -2.49
RNU6-541P-201ENST00000384709 UNC13BO14795 1591 aa-0.49□□□□□ -2.49
RNU6-541P-201ENST00000384709 FAM208BQ5VWN6 2430 aa-0.49□□□□□ -2.49
RNU6-541P-201ENST00000384709 VIRMAQ69YN4 1812 aaKnown RBP-0.49□□□□□ -2.49
RNU6-541P-201ENST00000384709 A0A096LNT2 108 aa-0.49□□□□□ -2.49
RNU6-541P-201ENST00000384709 NBDYA0A0U1RRE5 68 aa-0.49□□□□□ -2.49
RNU6-541P-201ENST00000384709 HIST1H2BKO60814 126 aa-0.49□□□□□ -2.49
RNU6-541P-201ENST00000384709 TRGC2P03986 189 aa-0.49□□□□□ -2.49
RNU6-541P-201ENST00000384709 HIST1H2BJP06899 126 aa-0.49□□□□□ -2.49
RNU6-541P-201ENST00000384709 CXCL1P09341 107 aa-0.49□□□□□ -2.49
RNU6-541P-201ENST00000384709 EVI2AP22794 236 aa-0.49□□□□□ -2.49
RNU6-541P-201ENST00000384709 NCALDP61601 193 aa-0.49□□□□□ -2.49
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms