RNA–Protein interactions for RNA: ENST00000382004.7

RFX3-204, Transcript of regulatory factor X3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFX3, Length 9,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-204ENST00000382004 TMEM141Q96I45 108 aa4.77□□□□□ -1.65
RFX3-204ENST00000382004 Q9HAA7 133 aa4.77□□□□□ -1.65
RFX3-204ENST00000382004 PLCE1Q9P212 2302 aa4.77□□□□□ -1.65
RFX3-204ENST00000382004 IGKV2D-24A0A075B6R9 120 aa4.76□□□□□ -1.65
RFX3-204ENST00000382004 E9PLN8 166 aa4.76□□□□□ -1.65
RFX3-204ENST00000382004 H0YJW9 148 aa4.76□□□□□ -1.65
RFX3-204ENST00000382004 C15orf53Q8NAA6 179 aa4.76□□□□□ -1.65
RFX3-204ENST00000382004 DAZ1Q9NQZ3 744 aaKnown RBP4.76□□□□□ -1.65
RFX3-204ENST00000382004 SHANK3Q9BYB0 1731 aa4.76□□□□□ -1.65
RFX3-204ENST00000382004 GNLYP22749 145 aa4.76□□□□□ -1.65
RFX3-204ENST00000382004 RPL18AQ02543 176 aaKnown RBP4.76□□□□□ -1.65
RFX3-204ENST00000382004 MRPS18CQ9Y3D5 142 aaKnown RBP4.76□□□□□ -1.65
RFX3-204ENST00000382004 RHODO00212 210 aa4.76□□□□□ -1.65
RFX3-204ENST00000382004 IGKV1-39P01597 117 aa4.76□□□□□ -1.65
RFX3-204ENST00000382004 IGKV1D-39P04432 117 aa4.76□□□□□ -1.65
RFX3-204ENST00000382004 Q71RC1 249 aaPredicted RBP4.76□□□□□ -1.65
RFX3-204ENST00000382004 NDUFA12Q9UI09 145 aa4.76□□□□□ -1.65
RFX3-204ENST00000382004 ZNF236Q9UL36 1845 aa4.76□□□□□ -1.65
RFX3-204ENST00000382004 TNRC6CQ9HCJ0 1690 aaKnown RBP4.76□□□□□ -1.65
RFX3-204ENST00000382004 C9orf118A6NHY6 69 aa4.76□□□□□ -1.65
RFX3-204ENST00000382004 ETDBQ3ZM63 59 aa4.76□□□□□ -1.65
RFX3-204ENST00000382004 FAM104BQ5XKR9 115 aa4.76□□□□□ -1.65
RFX3-204ENST00000382004 MAPK1IP1LQ8NDC0 245 aa4.76□□□□□ -1.65
RFX3-204ENST00000382004 SIGLEC9Q9Y336 463 aa4.76□□□□□ -1.65
RFX3-204ENST00000382004 CACNA1BQ00975 2339 aa4.76□□□□□ -1.65
RFX3-204ENST00000382004 BTCP35070 178 aa4.76□□□□□ -1.65
RFX3-204ENST00000382004 LAIR2Q6ISS4 152 aa4.76□□□□□ -1.65
RFX3-204ENST00000382004 NDUFC2O95298 119 aa4.76□□□□□ -1.65
RFX3-204ENST00000382004 LINC00205P59089 165 aa4.76□□□□□ -1.65
RFX3-204ENST00000382004 MLANAQ16655 118 aa4.76□□□□□ -1.65
RFX3-204ENST00000382004 RUSC1-AS1Q66K80 236 aa4.76□□□□□ -1.65
RFX3-204ENST00000382004 SPACA3Q8IXA5 215 aa4.76□□□□□ -1.65
RFX3-204ENST00000382004 LINC01356Q8N9X3 169 aa4.76□□□□□ -1.65
RFX3-204ENST00000382004 COL6A6A6NMZ7 2263 aa4.76□□□□□ -1.65
RFX3-204ENST00000382004 PINLYPA6NC86 204 aa4.76□□□□□ -1.65
RFX3-204ENST00000382004 FGF16O43320 207 aa4.76□□□□□ -1.65
RFX3-204ENST00000382004 LY6HO94772 140 aa4.76□□□□□ -1.65
RFX3-204ENST00000382004 C2orf66Q6UXQ4 117 aa4.76□□□□□ -1.65
RFX3-204ENST00000382004 DOCK3Q8IZD9 2030 aa4.75□□□□□ -1.65
RFX3-204ENST00000382004 GAGE12HA6NDE8 117 aa4.75□□□□□ -1.65
RFX3-204ENST00000382004 APOC4P55056 127 aa4.75□□□□□ -1.65
RFX3-204ENST00000382004 LYPD1Q8N2G4 141 aa4.75□□□□□ -1.65
RFX3-204ENST00000382004 RPP25LQ8N5L8 163 aaKnown RBP4.75□□□□□ -1.65
RFX3-204ENST00000382004 PTPRDP23468 1912 aa4.75□□□□□ -1.65
RFX3-204ENST00000382004 SAA4P35542 130 aa4.75□□□□□ -1.65
RFX3-204ENST00000382004 SEC61GP60059 68 aa4.75□□□□□ -1.65
RFX3-204ENST00000382004 Q86TA4 180 aa4.75□□□□□ -1.65
RFX3-204ENST00000382004 FBLN5Q9UBX5 448 aa4.75□□□□□ -1.65
RFX3-204ENST00000382004 XCL1P47992 114 aa4.75□□□□□ -1.65
RFX3-204ENST00000382004 CD177Q8N6Q3 437 aa4.75□□□□□ -1.65
RFX3-204ENST00000382004 ZMAT4Q9H898 229 aa4.75□□□□□ -1.65
RFX3-204ENST00000382004 SS18L2Q9UHA2 77 aa4.75□□□□□ -1.65
RFX3-204ENST00000382004 C5orf24Q7Z6I8 188 aa4.75□□□□□ -1.65
RFX3-204ENST00000382004 PRO1854Q9UHT4 67 aa4.75□□□□□ -1.65
RFX3-204ENST00000382004 F8W1H4 67 aa4.75□□□□□ -1.65
RFX3-204ENST00000382004 LINC01619G3V211 115 aa4.75□□□□□ -1.65
RFX3-204ENST00000382004 PYY3Q5JQD4 70 aa4.75□□□□□ -1.65
RFX3-204ENST00000382004 CFHR4Q92496 578 aa4.75□□□□□ -1.65
RFX3-204ENST00000382004 K7ERJ3 54 aa4.75□□□□□ -1.65
RFX3-204ENST00000382004 RNF223E7ERA6 249 aa4.75□□□□□ -1.65
RFX3-204ENST00000382004 M0R1W7 72 aa4.75□□□□□ -1.65
RFX3-204ENST00000382004 C20orf204Q6ZNR8 217 aa4.75□□□□□ -1.65
RFX3-204ENST00000382004 NRXN3Q9Y4C0 1643 aa4.74□□□□□ -1.65
RFX3-204ENST00000382004 ADAMTSL1Q8N6G6 1762 aa4.74□□□□□ -1.65
RFX3-204ENST00000382004 A0A1B0GUS0 222 aa4.74□□□□□ -1.65
RFX3-204ENST00000382004 E9PQ18 207 aa4.74□□□□□ -1.65
RFX3-204ENST00000382004 CEND1Q8N111 149 aa4.74□□□□□ -1.65
RFX3-204ENST00000382004 STRCP1A6NGW2 1772 aa4.74□□□□□ -1.65
RFX3-204ENST00000382004 GREB1Q4ZG55 1949 aa4.74□□□□□ -1.65
RFX3-204ENST00000382004 NHSQ6T4R5 1651 aa4.74□□□□□ -1.65
RFX3-204ENST00000382004 DLEC1Q9Y238 1755 aa4.74□□□□□ -1.65
RFX3-204ENST00000382004 PAQR4Q8N4S7 273 aaPredicted RBP4.74□□□□□ -1.65
RFX3-204ENST00000382004 TMEM190Q8WZ59 177 aa4.74□□□□□ -1.65
RFX3-204ENST00000382004 IGKV1-12A0A0C4DH73 117 aa4.74□□□□□ -1.65
RFX3-204ENST00000382004 A0A0J9YY99 117 aa4.74□□□□□ -1.65
RFX3-204ENST00000382004 OOSP1A8MZH6 123 aa4.74□□□□□ -1.65
RFX3-204ENST00000382004 H3BMG7 143 aa4.74□□□□□ -1.65
RFX3-204ENST00000382004 BUB3O43684 328 aa4.74□□□□□ -1.65
RFX3-204ENST00000382004 IGKV1D-12P01611 117 aa4.74□□□□□ -1.65
RFX3-204ENST00000382004 BPESC1Q9GZL8 116 aa4.74□□□□□ -1.65
RFX3-204ENST00000382004 ETDCA0A1B0GVM5 59 aa4.74□□□□□ -1.65
RFX3-204ENST00000382004 SRRM5B3KS81 715 aa4.74□□□□□ -1.65
RFX3-204ENST00000382004 MST1LQ2TV78 715 aa4.74□□□□□ -1.65
RFX3-204ENST00000382004 LYPD2Q6UXB3 125 aa4.74□□□□□ -1.65
RFX3-204ENST00000382004 Q6ZQT7 251 aa4.74□□□□□ -1.65
RFX3-204ENST00000382004 SPATA25Q9BR10 227 aa4.74□□□□□ -1.65
RFX3-204ENST00000382004 POLR3KQ9Y2Y1 108 aaPredicted RBP4.74□□□□□ -1.65
RFX3-204ENST00000382004 SDHAF1A6NFY7 115 aa4.74□□□□□ -1.65
RFX3-204ENST00000382004 IGLV2-23P01705 113 aa4.74□□□□□ -1.65
RFX3-204ENST00000382004 BAALC-AS2P0C853 105 aa4.74□□□□□ -1.65
RFX3-204ENST00000382004 Q8N8P6 123 aa4.74□□□□□ -1.65
RFX3-204ENST00000382004 HS3ST6Q96QI5 342 aa4.74□□□□□ -1.65
RFX3-204ENST00000382004 IGHV1OR15-1A0A075B7D0 117 aa4.73□□□□□ -1.65
RFX3-204ENST00000382004 B5MCH6 92 aa4.73□□□□□ -1.65
RFX3-204ENST00000382004 FUSP35637 526 aaKnown RBP eCLIP4.73□□□□□ -1.65
RFX3-204ENST00000382004 OR11H6Q8NGC7 330 aa4.73□□□□□ -1.65
RFX3-204ENST00000382004 RNF5Q99942 180 aa4.73□□□□□ -1.65
RFX3-204ENST00000382004 ORMDL1Q9P0S3 153 aa4.73□□□□□ -1.65
RFX3-204ENST00000382004 PSME4Q14997 1843 aa4.73□□□□□ -1.65
RFX3-204ENST00000382004 TRAV1-1A0A0B4J248 108 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms