RNA–Protein interactions for RNA: ENST00000381551.8

PDGFB-202, Transcript of platelet derived growth factor subunit B, humanhuman

TSL 5 BASIC

Gene PDGFB, Length 1,125 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-202ENST00000381551 ZNF738Q8NE65 137 aa11.4□□□□□ -0.58
PDGFB-202ENST00000381551 RPUSD4Q96CM3 377 aaKnown RBP11.4□□□□□ -0.58
PDGFB-202ENST00000381551 MRPL53Q96EL3 112 aaKnown RBP11.4□□□□□ -0.58
PDGFB-202ENST00000381551 AAMDCQ9H7C9 122 aa11.4□□□□□ -0.58
PDGFB-202ENST00000381551 PRELID1Q9Y255 219 aa11.4□□□□□ -0.58
PDGFB-202ENST00000381551 AGRNO00468 2067 aa11.4□□□□□ -0.58
PDGFB-202ENST00000381551 DNAH9Q9NYC9 4486 aa11.4□□□□□ -0.59
PDGFB-202ENST00000381551 PRAC2D3DTV9 90 aa11.39□□□□□ -0.59
PDGFB-202ENST00000381551 M0R3E3 92 aa11.39□□□□□ -0.59
PDGFB-202ENST00000381551 HLA-DRB4P13762 266 aa11.39□□□□□ -0.59
PDGFB-202ENST00000381551 RPL35AP18077 110 aaKnown RBP11.39□□□□□ -0.59
PDGFB-202ENST00000381551 EBLN2Q6P2I7 272 aa11.39□□□□□ -0.59
PDGFB-202ENST00000381551 STHQ8IWL8 128 aa11.39□□□□□ -0.59
PDGFB-202ENST00000381551 Q9H3A6 140 aa11.39□□□□□ -0.59
PDGFB-202ENST00000381551 HLA-DRB4X5D2U9 266 aa11.39□□□□□ -0.59
PDGFB-202ENST00000381551 TRAV1-1A0A0B4J248 108 aa11.38□□□□□ -0.59
PDGFB-202ENST00000381551 ZNF705DP0CH99 300 aaPredicted RBP11.38□□□□□ -0.59
PDGFB-202ENST00000381551 ZNF705BP0CI00 300 aaPredicted RBP11.38□□□□□ -0.59
PDGFB-202ENST00000381551 PRB4P10163 310 aaPredicted RBP11.38□□□□□ -0.59
PDGFB-202ENST00000381551 HAGHQ16775 308 aa11.38□□□□□ -0.59
PDGFB-202ENST00000381551 IQCF2Q8IXL9 164 aa11.38□□□□□ -0.59
PDGFB-202ENST00000381551 OR8A1Q8NGG7 326 aa11.38□□□□□ -0.59
PDGFB-202ENST00000381551 CLUHP3Q96NS8 147 aa11.38□□□□□ -0.59
PDGFB-202ENST00000381551 OTORQ9NRC9 128 aa11.38□□□□□ -0.59
PDGFB-202ENST00000381551 A0A1W2PRE2 83 aa11.37□□□□□ -0.59
PDGFB-202ENST00000381551 PGPA6NDG6 321 aa11.37□□□□□ -0.59
PDGFB-202ENST00000381551 SBSPONQ8IVN8 264 aa11.37□□□□□ -0.59
PDGFB-202ENST00000381551 B9D2Q9BPU9 175 aa11.37□□□□□ -0.59
PDGFB-202ENST00000381551 KIR2DL5BA0A0G2JN68 375 aa11.36□□□□□ -0.59
PDGFB-202ENST00000381551 KIR2DL5BA0A0G2JPC4 375 aa11.36□□□□□ -0.59
PDGFB-202ENST00000381551 A0A1B0GV50 99 aa11.36□□□□□ -0.59
PDGFB-202ENST00000381551 ZNF705EA8MWA4 302 aaPredicted RBP11.36□□□□□ -0.59
PDGFB-202ENST00000381551 DUSP14O95147 198 aaKnown RBP11.36□□□□□ -0.59
PDGFB-202ENST00000381551 CNN1P51911 297 aaKnown RBP11.36□□□□□ -0.59
PDGFB-202ENST00000381551 CCL20P78556 96 aa11.36□□□□□ -0.59
PDGFB-202ENST00000381551 TEX261Q6UWH6 196 aa11.36□□□□□ -0.59
PDGFB-202ENST00000381551 KIR2DL5AQ8N109 375 aa11.36□□□□□ -0.59
PDGFB-202ENST00000381551 OR4B1Q8NGF8 309 aa11.36□□□□□ -0.59
PDGFB-202ENST00000381551 KIR2DL5BQ8NHK3 375 aa11.36□□□□□ -0.59
PDGFB-202ENST00000381551 RXFP4Q8TDU9 374 aa11.36□□□□□ -0.59
PDGFB-202ENST00000381551 CSTL1Q9H114 145 aa11.36□□□□□ -0.59
PDGFB-202ENST00000381551 A8MTW9 85 aa11.35□□□□□ -0.59
PDGFB-202ENST00000381551 IGKV3-20P01619 116 aa11.35□□□□□ -0.59
PDGFB-202ENST00000381551 APOC4P55056 127 aa11.35□□□□□ -0.59
PDGFB-202ENST00000381551 SUMO1P63165 101 aaKnown RBP11.35□□□□□ -0.59
PDGFB-202ENST00000381551 HIST1H1AQ02539 215 aaPredicted RBP11.35□□□□□ -0.59
PDGFB-202ENST00000381551 ARL6IP6Q8N6S5 226 aa11.35□□□□□ -0.59
PDGFB-202ENST00000381551 ASCL2Q99929 193 aa11.35□□□□□ -0.59
PDGFB-202ENST00000381551 YTHDF2Q9Y5A9 579 aaKnown RBP11.35□□□□□ -0.59
PDGFB-202ENST00000381551 FAM74A7A6NL05 159 aa11.34□□□□□ -0.59
PDGFB-202ENST00000381551 DIRC3C9JPN6 131 aa11.34□□□□□ -0.59
PDGFB-202ENST00000381551 GIG44P09565 113 aaPredicted RBP11.34□□□□□ -0.59
PDGFB-202ENST00000381551 CSN1S1P47710 185 aa11.34□□□□□ -0.59
PDGFB-202ENST00000381551 UBE2G2P60604 165 aa11.34□□□□□ -0.59
PDGFB-202ENST00000381551 MORN3Q6PF18 240 aaPredicted RBP11.34□□□□□ -0.59
PDGFB-202ENST00000381551 AMTNQ6UX39 209 aa11.34□□□□□ -0.59
PDGFB-202ENST00000381551 ZNF680Q8NEM1 530 aa11.34□□□□□ -0.59
PDGFB-202ENST00000381551 OR10J6PQ8NGY7 276 aa11.34□□□□□ -0.59
PDGFB-202ENST00000381551 GGTLC3B5MD39 225 aa11.33□□□□□ -0.6
PDGFB-202ENST00000381551 NPIPB6E9PJ23 425 aa11.33□□□□□ -0.6
PDGFB-202ENST00000381551 TEX46H3BTG2 121 aa11.33□□□□□ -0.6
PDGFB-202ENST00000381551 UBE2CO00762 179 aa11.33□□□□□ -0.6
PDGFB-202ENST00000381551 HBE1P02100 147 aa11.33□□□□□ -0.6
PDGFB-202ENST00000381551 BLOC1S1P78537 153 aa11.33□□□□□ -0.6
PDGFB-202ENST00000381551 C9orf47Q6ZRZ4 202 aa11.33□□□□□ -0.6
PDGFB-202ENST00000381551 CMTM2Q8TAZ6 248 aa11.33□□□□□ -0.6
PDGFB-202ENST00000381551 NKX6-2Q9C056 277 aaPredicted RBP11.33□□□□□ -0.6
PDGFB-202ENST00000381551 AGPAT4-IT1Q9H0P7 198 aa11.33□□□□□ -0.6
PDGFB-202ENST00000381551 PAGE4O60829 102 aa11.32□□□□□ -0.6
PDGFB-202ENST00000381551 SLC25A5P05141 298 aaKnown RBP11.32□□□□□ -0.6
PDGFB-202ENST00000381551 PPT1P50897 306 aa11.32□□□□□ -0.6
PDGFB-202ENST00000381551 NUTF2P61970 127 aaKnown RBP11.32□□□□□ -0.6
PDGFB-202ENST00000381551 PMS2P11Q13670 270 aa11.32□□□□□ -0.6
PDGFB-202ENST00000381551 C5orf17Q8NAS9 161 aa11.32□□□□□ -0.6
PDGFB-202ENST00000381551 LYPD6BQ8NI32 183 aa11.32□□□□□ -0.6
PDGFB-202ENST00000381551 VGLL1Q99990 258 aa11.32□□□□□ -0.6
PDGFB-202ENST00000381551 SLC35B3Q9H1N7 401 aa11.32□□□□□ -0.6
PDGFB-202ENST00000381551 EPDR1Q9UM22 224 aa11.32□□□□□ -0.6
PDGFB-202ENST00000381551 ARL2-SNX15V9GYD0 113 aa11.32□□□□□ -0.6
PDGFB-202ENST00000381551 HUWE1Q7Z6Z7 4374 aaKnown RBP11.32□□□□□ -0.6
PDGFB-202ENST00000381551 NBEAL2Q6ZNJ1 2754 aa11.32□□□□□ -0.6
PDGFB-202ENST00000381551 IGKV2-40A0A087WW87 121 aaPredicted RBP11.31□□□□□ -0.6
PDGFB-202ENST00000381551 RBAKDNA6NC62 111 aa11.31□□□□□ -0.6
PDGFB-202ENST00000381551 IFNA7P01567 189 aa11.31□□□□□ -0.6
PDGFB-202ENST00000381551 IGKV2D-40P01614 121 aaPredicted RBP11.31□□□□□ -0.6
PDGFB-202ENST00000381551 TCRAP04437 139 aa11.31□□□□□ -0.6
PDGFB-202ENST00000381551 CT45A10P0DMU9 189 aa11.31□□□□□ -0.6
PDGFB-202ENST00000381551 ERCC8Q13216 396 aa11.31□□□□□ -0.6
PDGFB-202ENST00000381551 Q6ZWC4 215 aa11.31□□□□□ -0.6
PDGFB-202ENST00000381551 CCDC28AQ8IWP9 274 aa11.31□□□□□ -0.6
PDGFB-202ENST00000381551 LINC00477Q96M19 166 aa11.31□□□□□ -0.6
PDGFB-202ENST00000381551 TM2D3Q9BRN9 247 aa11.31□□□□□ -0.6
PDGFB-202ENST00000381551 CA1P00915 261 aaPredicted RBP11.3□□□□□ -0.6
PDGFB-202ENST00000381551 FXYD7P58549 80 aa11.3□□□□□ -0.6
PDGFB-202ENST00000381551 GNG5P63218 68 aa11.3□□□□□ -0.6
PDGFB-202ENST00000381551 CST9LP1Q5W188 147 aa11.3□□□□□ -0.6
PDGFB-202ENST00000381551 CSNK1G2-AS1Q8NCQ2 148 aa11.3□□□□□ -0.6
PDGFB-202ENST00000381551 NHLRC4P0CG21 123 aaPredicted RBP11.29□□□□□ -0.6
PDGFB-202ENST00000381551 GOLT1AQ6ZVE7 132 aa11.29□□□□□ -0.6
PDGFB-202ENST00000381551 ODF3Q96PU9 254 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 147.4 ms