RNA–Protein interactions for RNA: ENST00000380748.5

HMGN1-203, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 829 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-203ENST00000380748 SLC50A1Q9BRV3 221 aa11.58□□□□□ -0.56
HMGN1-203ENST00000380748 HHLA3Q9XRX5 114 aa11.58□□□□□ -0.56
HMGN1-203ENST00000380748 PKHD1L1Q86WI1 4243 aa11.57□□□□□ -0.56
HMGN1-203ENST00000380748 SMCO3A2RU48 225 aa11.57□□□□□ -0.56
HMGN1-203ENST00000380748 H3BP45 60 aa11.57□□□□□ -0.56
HMGN1-203ENST00000380748 WRBO00258 174 aa11.57□□□□□ -0.56
HMGN1-203ENST00000380748 KRTAP10-4P60372 401 aaPredicted RBP11.57□□□□□ -0.56
HMGN1-203ENST00000380748 FHL2Q14192 279 aa11.57□□□□□ -0.56
HMGN1-203ENST00000380748 SPANXN5Q5MJ07 72 aa11.57□□□□□ -0.56
HMGN1-203ENST00000380748 MZT2AQ6P582 158 aa11.57□□□□□ -0.56
HMGN1-203ENST00000380748 MRPL16Q9NX20 251 aaKnown RBP11.57□□□□□ -0.56
HMGN1-203ENST00000380748 TCL1AP56279 114 aa11.56□□□□□ -0.56
HMGN1-203ENST00000380748 RPP30P78346 268 aaKnown RBP11.56□□□□□ -0.56
HMGN1-203ENST00000380748 C10orf126Q8N4M7 172 aa11.56□□□□□ -0.56
HMGN1-203ENST00000380748 ODF3Q96PU9 254 aa11.56□□□□□ -0.56
HMGN1-203ENST00000380748 CIB3Q96Q77 187 aaPredicted RBP11.56□□□□□ -0.56
HMGN1-203ENST00000380748 PRRT1Q99946 306 aa11.56□□□□□ -0.56
HMGN1-203ENST00000380748 ARL6Q9H0F7 186 aa11.56□□□□□ -0.56
HMGN1-203ENST00000380748 C7orf71A4D174 169 aa11.55□□□□□ -0.56
HMGN1-203ENST00000380748 E5RGE8 158 aa11.55□□□□□ -0.56
HMGN1-203ENST00000380748 K7EQD1 137 aa11.55□□□□□ -0.56
HMGN1-203ENST00000380748 MED6O75586 246 aa11.55□□□□□ -0.56
HMGN1-203ENST00000380748 AKAIN1P0CW23 69 aa11.55□□□□□ -0.56
HMGN1-203ENST00000380748 SRIP30626 198 aa11.55□□□□□ -0.56
HMGN1-203ENST00000380748 SRPXP78539 464 aa11.55□□□□□ -0.56
HMGN1-203ENST00000380748 SSBP1Q04837 148 aaKnown RBP11.55□□□□□ -0.56
HMGN1-203ENST00000380748 SLAQ13239 276 aa11.55□□□□□ -0.56
HMGN1-203ENST00000380748 C15orf40Q8WUR7 153 aa11.55□□□□□ -0.56
HMGN1-203ENST00000380748 VGLL1Q99990 258 aa11.55□□□□□ -0.56
HMGN1-203ENST00000380748 ARV1Q9H2C2 271 aa11.55□□□□□ -0.56
HMGN1-203ENST00000380748 SYNGR2O43760 224 aa11.54□□□□□ -0.56
HMGN1-203ENST00000380748 ANXA2RQ3ZCQ2 193 aa11.54□□□□□ -0.56
HMGN1-203ENST00000380748 CLVS1Q8IUQ0 354 aaPredicted RBP11.54□□□□□ -0.56
HMGN1-203ENST00000380748 EIF4E3Q8N5X7 224 aaKnown RBP11.54□□□□□ -0.56
HMGN1-203ENST00000380748 RCL1Q9Y2P8 373 aaKnown RBP11.54□□□□□ -0.56
HMGN1-203ENST00000380748 ANXA3P12429 323 aa11.53□□□□□ -0.56
HMGN1-203ENST00000380748 SELENOTP62341 195 aa11.53□□□□□ -0.56
HMGN1-203ENST00000380748 CD300CQ08708 224 aa11.53□□□□□ -0.56
HMGN1-203ENST00000380748 ZNF415Q09FC8 603 aa11.53□□□□□ -0.56
HMGN1-203ENST00000380748 BTN1A1Q13410 526 aa11.53□□□□□ -0.56
HMGN1-203ENST00000380748 S100A7AQ86SG5 101 aa11.53□□□□□ -0.56
HMGN1-203ENST00000380748 FUNDC2Q9BWH2 189 aa11.53□□□□□ -0.56
HMGN1-203ENST00000380748 TP53TG3Q9ULZ0 132 aa11.53□□□□□ -0.56
HMGN1-203ENST00000380748 LRP2P98164 4655 aa11.53□□□□□ -0.56
HMGN1-203ENST00000380748 DUXBA0A1W2PPF3 345 aa11.52□□□□□ -0.57
HMGN1-203ENST00000380748 SLC25A5P05141 298 aaKnown RBP11.52□□□□□ -0.57
HMGN1-203ENST00000380748 SCXQ7RTU7 201 aa11.52□□□□□ -0.57
HMGN1-203ENST00000380748 LRTM2Q8N967 370 aa11.52□□□□□ -0.57
HMGN1-203ENST00000380748 SMIM4Q8WVI0 70 aa11.52□□□□□ -0.57
HMGN1-203ENST00000380748 MRPL32Q9BYC8 188 aaKnown RBP11.52□□□□□ -0.57
HMGN1-203ENST00000380748 Q9HAA7 133 aa11.52□□□□□ -0.57
HMGN1-203ENST00000380748 STRAPQ9Y3F4 350 aaKnown RBP11.52□□□□□ -0.57
HMGN1-203ENST00000380748 TRGV4A0A0C4DH28 118 aa11.51□□□□□ -0.57
HMGN1-203ENST00000380748 SLC25A6P12236 298 aa11.51□□□□□ -0.57
HMGN1-203ENST00000380748 GYPEP15421 78 aa11.51□□□□□ -0.57
HMGN1-203ENST00000380748 WFDC2Q14508 124 aa11.51□□□□□ -0.57
HMGN1-203ENST00000380748 IBA57Q5T440 356 aaKnown RBP11.51□□□□□ -0.57
HMGN1-203ENST00000380748 MORN5Q5VZ52 161 aa11.51□□□□□ -0.57
HMGN1-203ENST00000380748 LINC00305Q7Z4B0 112 aa11.51□□□□□ -0.57
HMGN1-203ENST00000380748 AP3S1Q92572 193 aa11.51□□□□□ -0.57
HMGN1-203ENST00000380748 MIXL1Q9H2W2 232 aa11.51□□□□□ -0.57
HMGN1-203ENST00000380748 PXMP4Q9Y6I8 212 aa11.51□□□□□ -0.57
HMGN1-203ENST00000380748 KLLNB2CW77 178 aa11.5□□□□□ -0.57
HMGN1-203ENST00000380748 H3BQ15 152 aa11.5□□□□□ -0.57
HMGN1-203ENST00000380748 SFTA3P0C7M3 94 aa11.5□□□□□ -0.57
HMGN1-203ENST00000380748 IGLC2P0DOY2 106 aa11.5□□□□□ -0.57
HMGN1-203ENST00000380748 MRPS10P82664 201 aaKnown RBP11.5□□□□□ -0.57
HMGN1-203ENST00000380748 SLC38A11Q08AI6 406 aa11.5□□□□□ -0.57
HMGN1-203ENST00000380748 ERCC8Q13216 396 aa11.5□□□□□ -0.57
HMGN1-203ENST00000380748 BPIFA4PQ86YQ2 179 aa11.5□□□□□ -0.57
HMGN1-203ENST00000380748 PCNPQ8WW12 178 aaKnown RBP11.5□□□□□ -0.57
HMGN1-203ENST00000380748 SAT2Q96F10 170 aaPredicted RBP11.5□□□□□ -0.57
HMGN1-203ENST00000380748 SCGB3A2Q96PL1 93 aa11.5□□□□□ -0.57
HMGN1-203ENST00000380748 RNF24Q9Y225 148 aa11.5□□□□□ -0.57
HMGN1-203ENST00000380748 IBA57-AS1B1ANH7 110 aa11.49□□□□□ -0.57
HMGN1-203ENST00000380748 CCNKO75909 580 aa11.49□□□□□ -0.57
HMGN1-203ENST00000380748 RNASE4P34096 147 aaKnown RBP11.49□□□□□ -0.57
HMGN1-203ENST00000380748 RRAS2P62070 204 aaPredicted RBP11.49□□□□□ -0.57
HMGN1-203ENST00000380748 VCX3AQ9NNX9 186 aa11.49□□□□□ -0.57
HMGN1-203ENST00000380748 SCP2D1Q9UJQ7 156 aa11.49□□□□□ -0.57
HMGN1-203ENST00000380748 TRAV5A0A0B4J249 113 aa11.48□□□□□ -0.57
HMGN1-203ENST00000380748 IGHV3-38A0A0C4DH36 116 aa11.48□□□□□ -0.57
HMGN1-203ENST00000380748 K7EPK0 472 aa11.48□□□□□ -0.57
HMGN1-203ENST00000380748 MPDU1O75352 247 aa11.48□□□□□ -0.57
HMGN1-203ENST00000380748 LINC01620Q4KN68 170 aa11.48□□□□□ -0.57
HMGN1-203ENST00000380748 Q6ZQT7 251 aa11.48□□□□□ -0.57
HMGN1-203ENST00000380748 ZNF479Q96JC4 524 aa11.48□□□□□ -0.57
HMGN1-203ENST00000380748 MCUBQ9NWR8 336 aa11.48□□□□□ -0.57
HMGN1-203ENST00000380748 PIGBOS1A0A0B4J2F0 54 aa11.47□□□□□ -0.57
HMGN1-203ENST00000380748 ANKRD20A5PA0PJZ0 165 aa11.47□□□□□ -0.57
HMGN1-203ENST00000380748 OR4E1P0C645 316 aa11.47□□□□□ -0.57
HMGN1-203ENST00000380748 OPCMLQ14982 345 aa11.47□□□□□ -0.57
HMGN1-203ENST00000380748 LINC01556Q5JQF7 62 aa11.47□□□□□ -0.57
HMGN1-203ENST00000380748 FAM19A4Q96LR4 140 aa11.47□□□□□ -0.57
HMGN1-203ENST00000380748 RABL2BQ9UNT1 228 aa11.47□□□□□ -0.57
HMGN1-203ENST00000380748 RGS13O14921 159 aa11.46□□□□□ -0.57
HMGN1-203ENST00000380748 ORM1P02763 201 aa11.46□□□□□ -0.57
HMGN1-203ENST00000380748 PRR9Q5T870 116 aa11.46□□□□□ -0.57
HMGN1-203ENST00000380748 BLNKQ8WV28 456 aa11.46□□□□□ -0.57
HMGN1-203ENST00000380748 TMEM37Q8WXS4 190 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 98.9 ms