RNA–Protein interactions for RNA: ENST00000380152.7

BRCA2-201, Transcript of BRCA2, DNA repair associated, humanhuman

APPRIS P1 TSL 5 BASIC

Gene BRCA2, Length 11,986 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-201ENST00000380152 WNT2P09544 360 aa3.4□□□□□ -1.87
BRCA2-201ENST00000380152 PLNP26678 52 aa3.4□□□□□ -1.87
BRCA2-201ENST00000380152 VWC2Q2TAL6 325 aa3.4□□□□□ -1.87
BRCA2-201ENST00000380152 CENPVQ7Z7K6 275 aaPredicted RBP3.4□□□□□ -1.87
BRCA2-201ENST00000380152 PRRC2CQ9Y520 2896 aaKnown RBP3.4□□□□□ -1.87
BRCA2-201ENST00000380152 F8W1H4 67 aa3.4□□□□□ -1.87
BRCA2-201ENST00000380152 TOMM40O96008 361 aa3.4□□□□□ -1.87
BRCA2-201ENST00000380152 TMEM249Q2WGJ8 235 aa3.4□□□□□ -1.87
BRCA2-201ENST00000380152 IGFL4Q6B9Z1 124 aa3.4□□□□□ -1.87
BRCA2-201ENST00000380152 TEX43Q6ZNM6 134 aa3.4□□□□□ -1.87
BRCA2-201ENST00000380152 SPACA3Q8IXA5 215 aa3.4□□□□□ -1.87
BRCA2-201ENST00000380152 CHAC1Q9BUX1 264 aa3.4□□□□□ -1.87
BRCA2-201ENST00000380152 DSCAMO60469 2012 aa3.4□□□□□ -1.87
BRCA2-201ENST00000380152 IGHV1-46P01743 117 aa3.4□□□□□ -1.87
BRCA2-201ENST00000380152 IGHV1-8P0DP01 117 aa3.4□□□□□ -1.87
BRCA2-201ENST00000380152 RHOGP84095 191 aa3.4□□□□□ -1.87
BRCA2-201ENST00000380152 ZFP36L1Q07352 338 aaKnown RBP3.4□□□□□ -1.87
BRCA2-201ENST00000380152 ERCC8Q13216 396 aa3.4□□□□□ -1.87
BRCA2-201ENST00000380152 WDR86Q86TI4 376 aa3.4□□□□□ -1.87
BRCA2-201ENST00000380152 TRBV7-9A0A0J9YWB2 115 aa3.4□□□□□ -1.87
BRCA2-201ENST00000380152 IGLV3-1P01715 115 aa3.4□□□□□ -1.87
BRCA2-201ENST00000380152 C15orf32Q32M92 178 aa3.4□□□□□ -1.87
BRCA2-201ENST00000380152 C8orf49Q96NF6 230 aa3.4□□□□□ -1.87
BRCA2-201ENST00000380152 EDA2RQ9HAV5 297 aa3.4□□□□□ -1.87
BRCA2-201ENST00000380152 IGHV1-3A0A0C4DH29 117 aa3.4□□□□□ -1.87
BRCA2-201ENST00000380152 ZNF134P52741 427 aa3.4□□□□□ -1.87
BRCA2-201ENST00000380152 LINC00527Q9UJ94 153 aa3.4□□□□□ -1.87
BRCA2-201ENST00000380152 ZNF474Q6S9Z5 364 aaPredicted RBP3.4□□□□□ -1.87
BRCA2-201ENST00000380152 PRDM6Q9NQX0 595 aa3.4□□□□□ -1.87
BRCA2-201ENST00000380152 A0A1W2PPI3 338 aa3.39□□□□□ -1.87
BRCA2-201ENST00000380152 RNASE2P10153 161 aaKnown RBP3.39□□□□□ -1.87
BRCA2-201ENST00000380152 CDKN1BP46527 198 aa3.39□□□□□ -1.87
BRCA2-201ENST00000380152 SPXQ9BT56 116 aa3.39□□□□□ -1.87
BRCA2-201ENST00000380152 H7C1H1 209 aa3.39□□□□□ -1.87
BRCA2-201ENST00000380152 LMO1P25800 156 aa3.39□□□□□ -1.87
BRCA2-201ENST00000380152 IGLC7A0M8Q6 106 aa3.39□□□□□ -1.87
BRCA2-201ENST00000380152 GAGE12HA6NDE8 117 aa3.39□□□□□ -1.87
BRCA2-201ENST00000380152 C9JAW5 83 aa3.39□□□□□ -1.87
BRCA2-201ENST00000380152 IGHV3-11P01762 117 aa3.39□□□□□ -1.87
BRCA2-201ENST00000380152 ZC2HC1AQ96GY0 325 aa3.39□□□□□ -1.87
BRCA2-201ENST00000380152 DUX3Q96PT4 197 aa3.39□□□□□ -1.87
BRCA2-201ENST00000380152 SMPXQ9UHP9 88 aa3.39□□□□□ -1.87
BRCA2-201ENST00000380152 SIGLEC9Q9Y336 463 aa3.39□□□□□ -1.87
BRCA2-201ENST00000380152 MOB4Q9Y3A3 225 aa3.39□□□□□ -1.87
BRCA2-201ENST00000380152 DUX5Q96PT3 197 aa3.39□□□□□ -1.87
BRCA2-201ENST00000380152 TRGV9Q99603 122 aa3.39□□□□□ -1.87
BRCA2-201ENST00000380152 NDUFA4L2Q9NRX3 87 aa3.39□□□□□ -1.87
BRCA2-201ENST00000380152 IGHV3-73A0A0B4J1V6 119 aa3.39□□□□□ -1.87
BRCA2-201ENST00000380152 KIR2DL5BA0A0G2JN68 375 aa3.39□□□□□ -1.87
BRCA2-201ENST00000380152 KIR2DL5BA0A0G2JPC4 375 aa3.39□□□□□ -1.87
BRCA2-201ENST00000380152 KIR2DL5AQ8N109 375 aa3.39□□□□□ -1.87
BRCA2-201ENST00000380152 TMEM75Q8N9X5 138 aa3.39□□□□□ -1.87
BRCA2-201ENST00000380152 ATP6V0BQ99437 205 aa3.39□□□□□ -1.87
BRCA2-201ENST00000380152 PGPEP1Q9NXJ5 209 aa3.39□□□□□ -1.87
BRCA2-201ENST00000380152 TSSC4Q9Y5U2 329 aaPredicted RBP3.39□□□□□ -1.87
BRCA2-201ENST00000380152 CNTFRP26992 372 aa3.39□□□□□ -1.87
BRCA2-201ENST00000380152 ETDBQ3ZM63 59 aa3.39□□□□□ -1.87
BRCA2-201ENST00000380152 M0R2P5 195 aa3.39□□□□□ -1.87
BRCA2-201ENST00000380152 LYPD2Q6UXB3 125 aa3.39□□□□□ -1.87
BRCA2-201ENST00000380152 Q6ZR03 302 aa3.39□□□□□ -1.87
BRCA2-201ENST00000380152 FOXL2NBQ6ZUU3 175 aa3.39□□□□□ -1.87
BRCA2-201ENST00000380152 LYPD1Q8N2G4 141 aa3.39□□□□□ -1.87
BRCA2-201ENST00000380152 NUP37Q8NFH4 326 aa3.39□□□□□ -1.87
BRCA2-201ENST00000380152 TMEM101Q96IK0 257 aa3.39□□□□□ -1.87
BRCA2-201ENST00000380152 COL4A4P53420 1690 aaPredicted RBP3.39□□□□□ -1.87
BRCA2-201ENST00000380152 K7ERJ3 54 aa3.39□□□□□ -1.87
BRCA2-201ENST00000380152 PAX8Q06710 450 aa3.39□□□□□ -1.87
BRCA2-201ENST00000380152 DUX4L9Q6RFH8 374 aaPredicted RBP3.39□□□□□ -1.87
BRCA2-201ENST00000380152 TMEM213A2RRL7 107 aa3.39□□□□□ -1.87
BRCA2-201ENST00000380152 ITLN2Q8WWU7 325 aaPredicted RBP3.39□□□□□ -1.87
BRCA2-201ENST00000380152 TRAV26-2A0A0B4J265 109 aa3.38□□□□□ -1.87
BRCA2-201ENST00000380152 TMEM178BH3BS89 294 aa3.38□□□□□ -1.87
BRCA2-201ENST00000380152 NTN3O00634 580 aaPredicted RBP3.38□□□□□ -1.87
BRCA2-201ENST00000380152 ATXN8Q156A1 80 aa3.38□□□□□ -1.87
BRCA2-201ENST00000380152 CEND1Q8N111 149 aa3.38□□□□□ -1.87
BRCA2-201ENST00000380152 TNFRSF14Q92956 283 aa3.38□□□□□ -1.87
BRCA2-201ENST00000380152 PROK2Q9HC23 129 aa3.38□□□□□ -1.87
BRCA2-201ENST00000380152 DKK2Q9UBU2 259 aa3.38□□□□□ -1.87
BRCA2-201ENST00000380152 TNFRSF6BO95407 300 aa3.38□□□□□ -1.87
BRCA2-201ENST00000380152 SP9P0CG40 484 aa3.38□□□□□ -1.87
BRCA2-201ENST00000380152 ITGB1BP1O14713 200 aa3.38□□□□□ -1.87
BRCA2-201ENST00000380152 RNASE8Q8TDE3 154 aaKnown RBP3.38□□□□□ -1.87
BRCA2-201ENST00000380152 SLC50A1Q9BRV3 221 aa3.38□□□□□ -1.87
BRCA2-201ENST00000380152 PLSCR4Q9NRQ2 329 aa3.38□□□□□ -1.87
BRCA2-201ENST00000380152 IGHV2-70DA0A0C4DH43 119 aa3.38□□□□□ -1.87
BRCA2-201ENST00000380152 AMTNQ6UX39 209 aa3.38□□□□□ -1.87
BRCA2-201ENST00000380152 C14orf178Q8N769 122 aaPredicted RBP3.38□□□□□ -1.87
BRCA2-201ENST00000380152 SPTAN1Q13813 2472 aaKnown RBP3.38□□□□□ -1.87
BRCA2-201ENST00000380152 ABCA4P78363 2273 aa3.38□□□□□ -1.87
BRCA2-201ENST00000380152 LINC01559Q495D7 138 aa3.38□□□□□ -1.87
BRCA2-201ENST00000380152 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP3.38□□□□□ -1.87
BRCA2-201ENST00000380152 SRRM4A7MD48 611 aaKnown RBP3.38□□□□□ -1.87
BRCA2-201ENST00000380152 HIST1H4AP62805 103 aaKnown RBP3.38□□□□□ -1.87
BRCA2-201ENST00000380152 TMEM219Q86XT9 240 aa3.38□□□□□ -1.87
BRCA2-201ENST00000380152 PLCE1Q9P212 2302 aa3.38□□□□□ -1.87
BRCA2-201ENST00000380152 SLC25A15Q9Y619 301 aa3.38□□□□□ -1.87
BRCA2-201ENST00000380152 NCOR1O75376 2440 aa3.38□□□□□ -1.87
BRCA2-201ENST00000380152 TRAV8-3A0A0A6YYJ7 113 aa3.38□□□□□ -1.87
BRCA2-201ENST00000380152 TDGF1P13385 188 aa3.38□□□□□ -1.87
BRCA2-201ENST00000380152 PAX1P15863 534 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 892 ms