RNA–Protein interactions for RNA: ENST00000379215.8

ECHDC3-201, Transcript of enoyl-CoA hydratase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ECHDC3, Length 1,649 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3-201ENST00000379215 TMEM75Q8N9X5 138 aa18.58■□□□□ 0.56
ECHDC3-201ENST00000379215 SMIM12Q96EX1 92 aa18.58■□□□□ 0.56
ECHDC3-201ENST00000379215 SIGLEC8Q9NYZ4 499 aa18.58■□□□□ 0.56
ECHDC3-201ENST00000379215 SOCS3O14543 225 aa18.57■□□□□ 0.56
ECHDC3-201ENST00000379215 CSN3P07498 182 aa18.57■□□□□ 0.56
ECHDC3-201ENST00000379215 ID1P41134 155 aa18.57■□□□□ 0.56
ECHDC3-201ENST00000379215 CENPWQ5EE01 88 aa18.57■□□□□ 0.56
ECHDC3-201ENST00000379215 GOLT1AQ6ZVE7 132 aa18.57■□□□□ 0.56
ECHDC3-201ENST00000379215 DYNLRB2Q8TF09 96 aa18.57■□□□□ 0.56
ECHDC3-201ENST00000379215 TRBV6-1A0A0K0K1D8 114 aa18.56■□□□□ 0.56
ECHDC3-201ENST00000379215 M0R3E3 92 aa18.56■□□□□ 0.56
ECHDC3-201ENST00000379215 PAFAH1B2P68402 229 aa18.56■□□□□ 0.56
ECHDC3-201ENST00000379215 TRAV8-2A0A0B4J237 113 aa18.56■□□□□ 0.56
ECHDC3-201ENST00000379215 RPL23P62829 140 aaKnown RBP18.56■□□□□ 0.56
ECHDC3-201ENST00000379215 ADIRFQ15847 76 aa18.56■□□□□ 0.56
ECHDC3-201ENST00000379215 LCN12Q6JVE5 192 aa18.56■□□□□ 0.56
ECHDC3-201ENST00000379215 LINC01551Q86U37 167 aa18.56■□□□□ 0.56
ECHDC3-201ENST00000379215 CITED1Q99966 193 aa18.56■□□□□ 0.56
ECHDC3-201ENST00000379215 TRBV20OR9-2A0A075B6H5 130 aa18.55■□□□□ 0.56
ECHDC3-201ENST00000379215 PSG3Q16557 428 aa18.55■□□□□ 0.56
ECHDC3-201ENST00000379215 IGF2BP2-AS1Q96M15 143 aa18.55■□□□□ 0.56
ECHDC3-201ENST00000379215 RBAKDNA6NC62 111 aa18.54■□□□□ 0.56
ECHDC3-201ENST00000379215 ADAMTSL5Q6ZMM2 481 aa18.54■□□□□ 0.56
ECHDC3-201ENST00000379215 LINC00479Q96M42 142 aa18.54■□□□□ 0.56
ECHDC3-201ENST00000379215 MS4A6AQ9H2W1 248 aa18.54■□□□□ 0.56
ECHDC3-201ENST00000379215 TRAV2A0A0B4J234 112 aa18.53■□□□□ 0.56
ECHDC3-201ENST00000379215 DNASE2O00115 360 aaPredicted RBP18.53■□□□□ 0.56
ECHDC3-201ENST00000379215 PF4P02776 101 aa18.53■□□□□ 0.56
ECHDC3-201ENST00000379215 BAGE2Q86Y30 109 aa18.53■□□□□ 0.56
ECHDC3-201ENST00000379215 MAST4O15021 2626 aa18.53■□□□□ 0.56
ECHDC3-201ENST00000379215 RBPMS2Q6ZRY4 209 aaKnown RBP18.52■□□□□ 0.56
ECHDC3-201ENST00000379215 DCANP1Q8TF63 244 aa18.52■□□□□ 0.56
ECHDC3-201ENST00000379215 IGKV3-7A0A075B6H7 116 aa18.52■□□□□ 0.55
ECHDC3-201ENST00000379215 TRAV34A0A0B4J273 112 aa18.52■□□□□ 0.55
ECHDC3-201ENST00000379215 C7orf77A4D0Y5 90 aa18.52■□□□□ 0.55
ECHDC3-201ENST00000379215 FLI1Q01543 452 aaPredicted RBP18.52■□□□□ 0.55
ECHDC3-201ENST00000379215 KRTAP24-1Q3LI83 254 aa18.52■□□□□ 0.55
ECHDC3-201ENST00000379215 IGFL4Q6B9Z1 124 aa18.52■□□□□ 0.55
ECHDC3-201ENST00000379215 ATRAIDQ6UW56 229 aa18.52■□□□□ 0.55
ECHDC3-201ENST00000379215 RNF182Q8N6D2 247 aa18.52■□□□□ 0.55
ECHDC3-201ENST00000379215 RPS10P5Q9NQ39 176 aa18.52■□□□□ 0.55
ECHDC3-201ENST00000379215 SETD2Q9BYW2 2564 aaPredicted RBP18.52■□□□□ 0.55
ECHDC3-201ENST00000379215 A0A087WWC5 75 aa18.51■□□□□ 0.55
ECHDC3-201ENST00000379215 TRAV25A0A0B4J276 109 aa18.51■□□□□ 0.55
ECHDC3-201ENST00000379215 LTAP01374 205 aa18.51■□□□□ 0.55
ECHDC3-201ENST00000379215 HLA-DMBP28068 263 aa18.51■□□□□ 0.55
ECHDC3-201ENST00000379215 SNRPD3P62318 126 aaKnown RBP18.51■□□□□ 0.55
ECHDC3-201ENST00000379215 Q86TA4 180 aa18.51■□□□□ 0.55
ECHDC3-201ENST00000379215 BIN3Q9NQY0 253 aa18.51■□□□□ 0.55
ECHDC3-201ENST00000379215 ZFP30Q9Y2G7 519 aa18.51■□□□□ 0.55
ECHDC3-201ENST00000379215 NIPBLQ6KC79 2804 aaeCLIP18.51■□□□□ 0.55
ECHDC3-201ENST00000379215 MT-ND4LP03901 98 aa18.5■□□□□ 0.55
ECHDC3-201ENST00000379215 ZNF738Q8NE65 137 aa18.5■□□□□ 0.55
ECHDC3-201ENST00000379215 OCC1Q8TAD7 63 aa18.5■□□□□ 0.55
ECHDC3-201ENST00000379215 K7EQG2 157 aa18.49■□□□□ 0.55
ECHDC3-201ENST00000379215 TSPAN4O14817 238 aa18.49■□□□□ 0.55
ECHDC3-201ENST00000379215 IGLV2-11P01706 119 aa18.49■□□□□ 0.55
ECHDC3-201ENST00000379215 DEFB114Q30KQ6 69 aa18.49■□□□□ 0.55
ECHDC3-201ENST00000379215 GBGT1Q8N5D6 347 aa18.49■□□□□ 0.55
ECHDC3-201ENST00000379215 ISOC2Q96AB3 205 aa18.49■□□□□ 0.55
ECHDC3-201ENST00000379215 CTDSP1Q9GZU7 261 aa18.49■□□□□ 0.55
ECHDC3-201ENST00000379215 PSG8Q9UQ74 426 aa18.49■□□□□ 0.55
ECHDC3-201ENST00000379215 ZNF705FA8MVS1 300 aaPredicted RBP18.49■□□□□ 0.55
ECHDC3-201ENST00000379215 JMJD1CQ15652 2540 aa18.48■□□□□ 0.55
ECHDC3-201ENST00000379215 IGKV2-40A0A087WW87 121 aaPredicted RBP18.48■□□□□ 0.55
ECHDC3-201ENST00000379215 PGPEP1LA6NFU8 196 aa18.48■□□□□ 0.55
ECHDC3-201ENST00000379215 IGKV2D-40P01614 121 aaPredicted RBP18.48■□□□□ 0.55
ECHDC3-201ENST00000379215 PRNTQ86SH4 94 aa18.48■□□□□ 0.55
ECHDC3-201ENST00000379215 ANAPC16Q96DE5 110 aa18.48■□□□□ 0.55
ECHDC3-201ENST00000379215 TRAV8-1A0A0A6YYK1 113 aa18.47■□□□□ 0.55
ECHDC3-201ENST00000379215 PPP1R2P9O14990 202 aa18.47■□□□□ 0.55
ECHDC3-201ENST00000379215 SAPCD1Q5SSQ6 148 aa18.47■□□□□ 0.55
ECHDC3-201ENST00000379215 PRIMA1Q86XR5 153 aa18.47■□□□□ 0.55
ECHDC3-201ENST00000379215 TMEM183AQ8IXX5 376 aa18.47■□□□□ 0.55
ECHDC3-201ENST00000379215 TMEM242Q9NWH2 141 aa18.47■□□□□ 0.55
ECHDC3-201ENST00000379215 GCGP01275 180 aa18.46■□□□□ 0.55
ECHDC3-201ENST00000379215 IGLV2-8P01709 118 aa18.46■□□□□ 0.55
ECHDC3-201ENST00000379215 MGST1P10620 155 aaKnown RBP18.46■□□□□ 0.55
ECHDC3-201ENST00000379215 WFDC3Q8IUB2 231 aa18.46■□□□□ 0.55
ECHDC3-201ENST00000379215 LINC00482Q8N8I6 264 aa18.46■□□□□ 0.55
ECHDC3-201ENST00000379215 OR2K2Q8NGT1 345 aa18.46■□□□□ 0.55
ECHDC3-201ENST00000379215 C20orf173Q96LM9 149 aa18.46■□□□□ 0.55
ECHDC3-201ENST00000379215 SGK494Q96LW2 274 aa18.46■□□□□ 0.55
ECHDC3-201ENST00000379215 SPAG8Q99932 426 aaPredicted RBP18.46■□□□□ 0.55
ECHDC3-201ENST00000379215 NDFIP1Q9BT67 221 aa18.46■□□□□ 0.55
ECHDC3-201ENST00000379215 TMEM61Q8N0U2 210 aa18.45■□□□□ 0.54
ECHDC3-201ENST00000379215 OR10J6PQ8NGY7 276 aa18.45■□□□□ 0.54
ECHDC3-201ENST00000379215 SFRP2Q96HF1 295 aa18.45■□□□□ 0.54
ECHDC3-201ENST00000379215 MLST8Q9BVC4 326 aa18.45■□□□□ 0.54
ECHDC3-201ENST00000379215 TFPI2P48307 235 aa18.45■□□□□ 0.54
ECHDC3-201ENST00000379215 TMEM78Q5T7P6 136 aa18.45■□□□□ 0.54
ECHDC3-201ENST00000379215 TMEM158Q8WZ71 300 aa18.45■□□□□ 0.54
ECHDC3-201ENST00000379215 ZNF747Q9BV97 191 aa18.45■□□□□ 0.54
ECHDC3-201ENST00000379215 SMCO4Q9NRQ5 59 aa18.45■□□□□ 0.54
ECHDC3-201ENST00000379215 AURKAIP1Q9NWT8 199 aaPredicted RBP18.45■□□□□ 0.54
ECHDC3-201ENST00000379215 SELENOKQ9Y6D0 94 aa18.45■□□□□ 0.54
ECHDC3-201ENST00000379215 OR4C46A6NHA9 309 aa18.44■□□□□ 0.54
ECHDC3-201ENST00000379215 PRAC2D3DTV9 90 aa18.44■□□□□ 0.54
ECHDC3-201ENST00000379215 K7EN84 100 aa18.44■□□□□ 0.54
ECHDC3-201ENST00000379215 SAP30O75446 220 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms