RNA–Protein interactions for RNA: ENST00000375604.6

MCF2L-203, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

APPRIS P3 TSL 2 BASIC

Gene MCF2L, Length 6,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-203ENST00000375604 ZNF479Q96JC4 524 aa13.74□□□□□ -0.21
MCF2L-203ENST00000375604 HEATR1Q9H583 2144 aaKnown RBP13.74□□□□□ -0.21
MCF2L-203ENST00000375604 LURAP1LQ8IV03 231 aa13.74□□□□□ -0.21
MCF2L-203ENST00000375604 BCL6BQ8N143 479 aaPredicted RBP13.74□□□□□ -0.21
MCF2L-203ENST00000375604 SPOCK3Q9BQ16 436 aa13.74□□□□□ -0.21
MCF2L-203ENST00000375604 RSPO3Q9BXY4 272 aaPredicted RBP13.74□□□□□ -0.21
MCF2L-203ENST00000375604 IGLV2-23P01705 113 aa13.74□□□□□ -0.21
MCF2L-203ENST00000375604 LOXP28300 417 aaPredicted RBP13.74□□□□□ -0.21
MCF2L-203ENST00000375604 STPG4Q8N801 248 aa13.74□□□□□ -0.21
MCF2L-203ENST00000375604 CGB3P0DN86 165 aa13.73□□□□□ -0.21
MCF2L-203ENST00000375604 GAGE6Q13070 117 aa13.73□□□□□ -0.21
MCF2L-203ENST00000375604 FAM90A2PQ658T7 463 aa13.73□□□□□ -0.21
MCF2L-203ENST00000375604 ZNF833PQ6ZTB9 187 aa13.73□□□□□ -0.21
MCF2L-203ENST00000375604 TRAV8-3A0A0A6YYJ7 113 aa13.73□□□□□ -0.21
MCF2L-203ENST00000375604 CITED2Q99967 270 aaPredicted RBP13.73□□□□□ -0.21
MCF2L-203ENST00000375604 IGLV3-9A0A075B6K5 115 aa13.73□□□□□ -0.21
MCF2L-203ENST00000375604 NDUFS8O00217 210 aa13.73□□□□□ -0.21
MCF2L-203ENST00000375604 PFN2P35080 140 aa13.72□□□□□ -0.21
MCF2L-203ENST00000375604 SS18Q15532 418 aa13.72□□□□□ -0.21
MCF2L-203ENST00000375604 TMEM242Q9NWH2 141 aa13.72□□□□□ -0.21
MCF2L-203ENST00000375604 POLEQ07864 2286 aa13.72□□□□□ -0.21
MCF2L-203ENST00000375604 KIAA2026Q5HYC2 2103 aa13.72□□□□□ -0.21
MCF2L-203ENST00000375604 C8orf86Q6ZUL3 223 aa13.72□□□□□ -0.21
MCF2L-203ENST00000375604 LIME1Q9H400 295 aa13.72□□□□□ -0.21
MCF2L-203ENST00000375604 ZNF562Q6V9R5 426 aa13.72□□□□□ -0.21
MCF2L-203ENST00000375604 UBE2CO00762 179 aa13.72□□□□□ -0.21
MCF2L-203ENST00000375604 RASL10AQ92737 203 aa13.72□□□□□ -0.21
MCF2L-203ENST00000375604 TNFRSF6BO95407 300 aa13.71□□□□□ -0.21
MCF2L-203ENST00000375604 PRSS57Q6UWY2 283 aa13.71□□□□□ -0.21
MCF2L-203ENST00000375604 NDUFA4L2Q9NRX3 87 aa13.71□□□□□ -0.21
MCF2L-203ENST00000375604 HAPLN4Q86UW8 402 aa13.71□□□□□ -0.21
MCF2L-203ENST00000375604 HLA-DMBP28068 263 aa13.71□□□□□ -0.21
MCF2L-203ENST00000375604 TP53TG1Q9Y2A0 90 aa13.71□□□□□ -0.21
MCF2L-203ENST00000375604 A0A0J9YY99 117 aa13.71□□□□□ -0.22
MCF2L-203ENST00000375604 CDK2AP2O75956 126 aa13.71□□□□□ -0.22
MCF2L-203ENST00000375604 REG4Q9BYZ8 158 aa13.71□□□□□ -0.22
MCF2L-203ENST00000375604 TIMM21Q9BVV7 248 aa13.7□□□□□ -0.22
MCF2L-203ENST00000375604 C1QTNF4Q9BXJ3 329 aa13.7□□□□□ -0.22
MCF2L-203ENST00000375604 TMEM14BQ9NUH8 114 aa13.7□□□□□ -0.22
MCF2L-203ENST00000375604 PI4KAP42356 2102 aa13.7□□□□□ -0.22
MCF2L-203ENST00000375604 IGHV4-59P01825 116 aa13.7□□□□□ -0.22
MCF2L-203ENST00000375604 C3orf79P0CE67 100 aa13.7□□□□□ -0.22
MCF2L-203ENST00000375604 HOXB4P17483 251 aaPredicted RBP13.7□□□□□ -0.22
MCF2L-203ENST00000375604 ANXA2RQ3ZCQ2 193 aa13.7□□□□□ -0.22
MCF2L-203ENST00000375604 TMEM238C9JI98 176 aa13.7□□□□□ -0.22
MCF2L-203ENST00000375604 F6UB75 175 aa13.7□□□□□ -0.22
MCF2L-203ENST00000375604 PRIMA1Q86XR5 153 aa13.7□□□□□ -0.22
MCF2L-203ENST00000375604 FAM186AA6NE01 2351 aa13.7□□□□□ -0.22
MCF2L-203ENST00000375604 NLRC5Q86WI3 1866 aa13.7□□□□□ -0.22
MCF2L-203ENST00000375604 C17orf77Q96MU5 243 aa13.69□□□□□ -0.22
MCF2L-203ENST00000375604 ZNF48Q96MX3 618 aaPredicted RBP13.69□□□□□ -0.22
MCF2L-203ENST00000375604 HOXD3P31249 432 aaPredicted RBP13.69□□□□□ -0.22
MCF2L-203ENST00000375604 ZNRF2Q8NHG8 242 aa13.69□□□□□ -0.22
MCF2L-203ENST00000375604 DEFB112Q30KQ8 113 aa13.69□□□□□ -0.22
MCF2L-203ENST00000375604 ATXN8Q156A1 80 aa13.69□□□□□ -0.22
MCF2L-203ENST00000375604 NXPH4O95158 308 aa13.68□□□□□ -0.22
MCF2L-203ENST00000375604 MST1LQ2TV78 715 aa13.68□□□□□ -0.22
MCF2L-203ENST00000375604 ADCYAP1P18509 176 aa13.68□□□□□ -0.22
MCF2L-203ENST00000375604 IGF2BP2-AS1Q96M15 143 aa13.68□□□□□ -0.22
MCF2L-203ENST00000375604 ITGB1BP1O14713 200 aa13.68□□□□□ -0.22
MCF2L-203ENST00000375604 CEACAM8P31997 349 aaPredicted RBP13.68□□□□□ -0.22
MCF2L-203ENST00000375604 A8MWV9 139 aa13.68□□□□□ -0.22
MCF2L-203ENST00000375604 IGKV1-39P01597 117 aa13.68□□□□□ -0.22
MCF2L-203ENST00000375604 IGKV1D-39P04432 117 aa13.68□□□□□ -0.22
MCF2L-203ENST00000375604 HSD52Q0P140 79 aa13.67□□□□□ -0.22
MCF2L-203ENST00000375604 LEPROTO15243 131 aa13.67□□□□□ -0.22
MCF2L-203ENST00000375604 C9JQL5 133 aa13.67□□□□□ -0.22
MCF2L-203ENST00000375604 ESDP10768 282 aa13.67□□□□□ -0.22
MCF2L-203ENST00000375604 IGFL3Q6UXB1 125 aa13.67□□□□□ -0.22
MCF2L-203ENST00000375604 Q8TCH9 128 aa13.67□□□□□ -0.22
MCF2L-203ENST00000375604 SYS1-DBNDD2H3BUS1 97 aa13.66□□□□□ -0.22
MCF2L-203ENST00000375604 APRG1Q8IVJ8 170 aa13.66□□□□□ -0.22
MCF2L-203ENST00000375604 DTX1Q86Y01 620 aa13.66□□□□□ -0.22
MCF2L-203ENST00000375604 TMEM75Q8N9X5 138 aa13.66□□□□□ -0.22
MCF2L-203ENST00000375604 TRAV1-1A0A0B4J248 108 aa13.66□□□□□ -0.22
MCF2L-203ENST00000375604 SHISA9B4DS77 424 aa13.66□□□□□ -0.22
MCF2L-203ENST00000375604 ZNF561-AS1K7EIQ3 104 aa13.66□□□□□ -0.22
MCF2L-203ENST00000375604 TCF15Q12870 199 aa13.66□□□□□ -0.22
MCF2L-203ENST00000375604 RITA1Q96K30 269 aa13.66□□□□□ -0.22
MCF2L-203ENST00000375604 NDUFAF3Q9BU61 184 aa13.66□□□□□ -0.22
MCF2L-203ENST00000375604 WT1-ASQ06250 92 aa13.66□□□□□ -0.22
MCF2L-203ENST00000375604 ZC2HC1BQ5TFG8 222 aa13.65□□□□□ -0.22
MCF2L-203ENST00000375604 PLEKHB2Q96CS7 222 aa13.65□□□□□ -0.22
MCF2L-203ENST00000375604 TRPT1Q86TN4 253 aaKnown RBP13.65□□□□□ -0.22
MCF2L-203ENST00000375604 ZNF726P1Q15940 193 aa13.65□□□□□ -0.22
MCF2L-203ENST00000375604 ZNF114Q8NC26 417 aa13.65□□□□□ -0.22
MCF2L-203ENST00000375604 IGHV4-38-2P0DP08 117 aa13.65□□□□□ -0.22
MCF2L-203ENST00000375604 PMVKQ15126 192 aa13.65□□□□□ -0.22
MCF2L-203ENST00000375604 RASL11AQ6T310 242 aa13.65□□□□□ -0.22
MCF2L-203ENST00000375604 RSPO1Q2MKA7 263 aaPredicted RBP13.65□□□□□ -0.22
MCF2L-203ENST00000375604 MPV17L2Q567V2 206 aa13.65□□□□□ -0.22
MCF2L-203ENST00000375604 PFN1P07737 140 aaKnown RBP13.65□□□□□ -0.23
MCF2L-203ENST00000375604 TRBV24-1A0A075B6N3 115 aa13.64□□□□□ -0.23
MCF2L-203ENST00000375604 C15orf65H3BRN8 121 aa13.64□□□□□ -0.23
MCF2L-203ENST00000375604 ATP6V0BQ99437 205 aa13.64□□□□□ -0.23
MCF2L-203ENST00000375604 CGB7P0DN87 165 aa13.64□□□□□ -0.23
MCF2L-203ENST00000375604 LYPD1Q8N2G4 141 aa13.64□□□□□ -0.23
MCF2L-203ENST00000375604 MTURNQ8N3F0 131 aa13.64□□□□□ -0.23
MCF2L-203ENST00000375604 KIF26AQ9ULI4 1882 aaPredicted RBP13.64□□□□□ -0.23
MCF2L-203ENST00000375604 TANC1Q9C0D5 1861 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms