RNA–Protein interactions for RNA: ENST00000375225.7

UBR4-203, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-203ENST00000375225 A0A087X0K7 114 aa9.55□□□□□ -0.88
UBR4-203ENST00000375225 CTSGP08311 255 aa9.55□□□□□ -0.88
UBR4-203ENST00000375225 CD33P20138 364 aa9.55□□□□□ -0.88
UBR4-203ENST00000375225 SAA4P35542 130 aa9.55□□□□□ -0.88
UBR4-203ENST00000375225 ZNF502Q8TBZ5 544 aa9.55□□□□□ -0.88
UBR4-203ENST00000375225 C17orf77Q96MU5 243 aa9.55□□□□□ -0.88
UBR4-203ENST00000375225 SNHG12Q9BXW3 62 aa9.55□□□□□ -0.88
UBR4-203ENST00000375225 RBAKDNA6NC62 111 aa9.54□□□□□ -0.88
UBR4-203ENST00000375225 ZNF785A8K8V0 405 aa9.54□□□□□ -0.88
UBR4-203ENST00000375225 VWC2LB2RUY7 222 aa9.54□□□□□ -0.88
UBR4-203ENST00000375225 F8W735 103 aaPredicted RBP9.54□□□□□ -0.88
UBR4-203ENST00000375225 LEPROTL1O95214 131 aa9.54□□□□□ -0.88
UBR4-203ENST00000375225 RPLP1P05386 114 aaKnown RBP9.54□□□□□ -0.88
UBR4-203ENST00000375225 EGR2P11161 476 aaPredicted RBP9.54□□□□□ -0.88
UBR4-203ENST00000375225 LMO4P61968 165 aa9.54□□□□□ -0.88
UBR4-203ENST00000375225 RHOGP84095 191 aa9.54□□□□□ -0.88
UBR4-203ENST00000375225 ECSCRQ19T08 205 aa9.54□□□□□ -0.88
UBR4-203ENST00000375225 C15orf32Q32M92 178 aa9.54□□□□□ -0.88
UBR4-203ENST00000375225 Q8N976 141 aa9.54□□□□□ -0.88
UBR4-203ENST00000375225 MAP1LC3CQ9BXW4 147 aa9.54□□□□□ -0.88
UBR4-203ENST00000375225 TMEM191AQ9H0A3 160 aa9.54□□□□□ -0.88
UBR4-203ENST00000375225 S4R3C0 116 aa9.54□□□□□ -0.88
UBR4-203ENST00000375225 TRAV9-2A0A087WT02 112 aa9.53□□□□□ -0.88
UBR4-203ENST00000375225 HSBP1L1C9JCN9 74 aa9.53□□□□□ -0.88
UBR4-203ENST00000375225 APOHP02749 345 aaPredicted RBP9.53□□□□□ -0.88
UBR4-203ENST00000375225 HNRNPA3P51991 378 aaKnown RBP9.53□□□□□ -0.88
UBR4-203ENST00000375225 ZNF493Q6ZR52 646 aa9.53□□□□□ -0.88
UBR4-203ENST00000375225 FA2HQ7L5A8 372 aa9.53□□□□□ -0.88
UBR4-203ENST00000375225 NRGNQ92686 78 aa9.53□□□□□ -0.88
UBR4-203ENST00000375225 METTL26Q96S19 204 aa9.53□□□□□ -0.88
UBR4-203ENST00000375225 BEX4Q9NWD9 120 aaPredicted RBP9.53□□□□□ -0.88
UBR4-203ENST00000375225 MOB4Q9Y3A3 225 aa9.53□□□□□ -0.88
UBR4-203ENST00000375225 CENPVL3A0A0U1RRI6 287 aa9.52□□□□□ -0.88
UBR4-203ENST00000375225 FAM223BA6NKX1 122 aa9.52□□□□□ -0.88
UBR4-203ENST00000375225 EREGO14944 169 aa9.52□□□□□ -0.88
UBR4-203ENST00000375225 ATP6V0E1O15342 81 aa9.52□□□□□ -0.88
UBR4-203ENST00000375225 SLC25A16P16260 332 aa9.52□□□□□ -0.88
UBR4-203ENST00000375225 GPR183P32249 361 aa9.52□□□□□ -0.88
UBR4-203ENST00000375225 CTRLP40313 264 aa9.52□□□□□ -0.88
UBR4-203ENST00000375225 FAM223AQ8IWN6 122 aa9.52□□□□□ -0.88
UBR4-203ENST00000375225 MRPL53Q96EL3 112 aaKnown RBP9.52□□□□□ -0.88
UBR4-203ENST00000375225 PRR25Q96S07 402 aa9.52□□□□□ -0.88
UBR4-203ENST00000375225 HIF1ANQ9NWT6 349 aa9.52□□□□□ -0.88
UBR4-203ENST00000375225 AKAP6Q13023 2319 aa9.52□□□□□ -0.89
UBR4-203ENST00000375225 M0R3E3 92 aa9.51□□□□□ -0.89
UBR4-203ENST00000375225 TCAPO15273 167 aa9.51□□□□□ -0.89
UBR4-203ENST00000375225 SH2D1AO60880 128 aa9.51□□□□□ -0.89
UBR4-203ENST00000375225 IGHV3-23P01764 117 aa9.51□□□□□ -0.89
UBR4-203ENST00000375225 ARMS2P0C7Q2 107 aa9.51□□□□□ -0.89
UBR4-203ENST00000375225 ATP5G2Q06055 141 aa9.51□□□□□ -0.89
UBR4-203ENST00000375225 PET117Q6UWS5 81 aa9.51□□□□□ -0.89
UBR4-203ENST00000375225 PSMG3-AS1Q96PY0 264 aa9.51□□□□□ -0.89
UBR4-203ENST00000375225 COL12A1Q99715 3063 aa9.51□□□□□ -0.89
UBR4-203ENST00000375225 IGHV4-30-2A0A087WSY4 118 aa9.51□□□□□ -0.89
UBR4-203ENST00000375225 IGHV1-24A0A0C4DH33 117 aa9.51□□□□□ -0.89
UBR4-203ENST00000375225 IGHV4-61A0A0C4DH41 118 aa9.51□□□□□ -0.89
UBR4-203ENST00000375225 CRXO43186 299 aaPredicted RBP9.51□□□□□ -0.89
UBR4-203ENST00000375225 IGLC3P0DOY3 106 aa9.51□□□□□ -0.89
UBR4-203ENST00000375225 TDRG1Q3Y452 100 aa9.51□□□□□ -0.89
UBR4-203ENST00000375225 COL5A1-AS1Q5SY13 56 aa9.51□□□□□ -0.89
UBR4-203ENST00000375225 FAM120AOSQ5T036 256 aa9.51□□□□□ -0.89
UBR4-203ENST00000375225 Q6ZN92 141 aa9.51□□□□□ -0.89
UBR4-203ENST00000375225 LRRC75A-AS1Q8N1F1 130 aa9.51□□□□□ -0.89
UBR4-203ENST00000375225 PRSS3P2Q8NHM4 247 aa9.51□□□□□ -0.89
UBR4-203ENST00000375225 ASCL2Q99929 193 aa9.51□□□□□ -0.89
UBR4-203ENST00000375225 TPPP3Q9BW30 176 aa9.51□□□□□ -0.89
UBR4-203ENST00000375225 AP5S1Q9NUS5 200 aa9.51□□□□□ -0.89
UBR4-203ENST00000375225 DCHS2Q6V1P9 2916 aa9.5□□□□□ -0.89
UBR4-203ENST00000375225 C2orf70A6NJV1 201 aa9.5□□□□□ -0.89
UBR4-203ENST00000375225 FABP5P3A8MUU1 101 aa9.5□□□□□ -0.89
UBR4-203ENST00000375225 CLEC3BP05452 202 aa9.5□□□□□ -0.89
UBR4-203ENST00000375225 CRIP2P52943 208 aaPredicted RBP9.5□□□□□ -0.89
UBR4-203ENST00000375225 PAX8Q06710 450 aa9.5□□□□□ -0.89
UBR4-203ENST00000375225 LCN12Q6JVE5 192 aa9.5□□□□□ -0.89
UBR4-203ENST00000375225 EBLN2Q6P2I7 272 aa9.5□□□□□ -0.89
UBR4-203ENST00000375225 C5orf56Q8N8D9 126 aa9.5□□□□□ -0.89
UBR4-203ENST00000375225 FER1L6-AS1Q8NA97 138 aa9.5□□□□□ -0.89
UBR4-203ENST00000375225 OR10AG1Q8NH19 301 aa9.5□□□□□ -0.89
UBR4-203ENST00000375225 C8orf49Q96NF6 230 aa9.5□□□□□ -0.89
UBR4-203ENST00000375225 ST20Q9HBF5 79 aa9.5□□□□□ -0.89
UBR4-203ENST00000375225 RNF114Q9Y508 228 aa9.5□□□□□ -0.89
UBR4-203ENST00000375225 IGKV2-40A0A087WW87 121 aaPredicted RBP9.49□□□□□ -0.89
UBR4-203ENST00000375225 IGHV1-69DA0A0B4J2H0 117 aa9.49□□□□□ -0.89
UBR4-203ENST00000375225 H3BUA1 57 aa9.49□□□□□ -0.89
UBR4-203ENST00000375225 SYS1-DBNDD2H3BUS1 97 aa9.49□□□□□ -0.89
UBR4-203ENST00000375225 BUB3O43684 328 aa9.49□□□□□ -0.89
UBR4-203ENST00000375225 IGKV2D-40P01614 121 aaPredicted RBP9.49□□□□□ -0.89
UBR4-203ENST00000375225 IGHV1-69P01742 117 aa9.49□□□□□ -0.89
UBR4-203ENST00000375225 CRIP1P50238 77 aa9.49□□□□□ -0.89
UBR4-203ENST00000375225 DEFB113Q30KQ7 82 aa9.49□□□□□ -0.89
UBR4-203ENST00000375225 FBLN7Q53RD9 439 aa9.49□□□□□ -0.89
UBR4-203ENST00000375225 LYZL1Q6UWQ5 148 aa9.49□□□□□ -0.89
UBR4-203ENST00000375225 ORMDL3Q8N138 153 aa9.49□□□□□ -0.89
UBR4-203ENST00000375225 ZFAND3Q9H8U3 227 aa9.49□□□□□ -0.89
UBR4-203ENST00000375225 MRPS16Q9Y3D3 137 aaKnown RBP9.49□□□□□ -0.89
UBR4-203ENST00000375225 UTP20O75691 2785 aaKnown RBP9.48□□□□□ -0.89
UBR4-203ENST00000375225 TRAV41A0A0B4J266 112 aa9.48□□□□□ -0.89
UBR4-203ENST00000375225 KRTAP10-9P60411 292 aa9.48□□□□□ -0.89
UBR4-203ENST00000375225 HIST1H1AQ02539 215 aaPredicted RBP9.48□□□□□ -0.89
UBR4-203ENST00000375225 FAM104BQ5XKR9 115 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms