RNA–Protein interactions for RNA: ENST00000374879.4

TMEFF1-201, Transcript of transmembrane protein with EGF like and two follistatin like domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEFF1, Length 2,611 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1-201ENST00000374879 TRGV9Q99603 122 aa16.24■□□□□ 0.19
TMEFF1-201ENST00000374879 ANAPC13Q9BS18 74 aa16.24■□□□□ 0.19
TMEFF1-201ENST00000374879 ZNF71Q9NQZ8 489 aaPredicted RBP16.24■□□□□ 0.19
TMEFF1-201ENST00000374879 TRBV6-1A0A0K0K1D8 114 aa16.23■□□□□ 0.19
TMEFF1-201ENST00000374879 CFAP126Q5VTH2 177 aa16.23■□□□□ 0.19
TMEFF1-201ENST00000374879 C8orf49Q96NF6 230 aa16.23■□□□□ 0.19
TMEFF1-201ENST00000374879 RAB9BQ9NP90 201 aa16.23■□□□□ 0.19
TMEFF1-201ENST00000374879 TMEM160Q9NX00 188 aa16.23■□□□□ 0.19
TMEFF1-201ENST00000374879 GAGE5Q13069 117 aa16.22■□□□□ 0.19
TMEFF1-201ENST00000374879 GAGE6Q13070 117 aa16.22■□□□□ 0.19
TMEFF1-201ENST00000374879 TAL2Q16559 108 aa16.22■□□□□ 0.19
TMEFF1-201ENST00000374879 MOGAT3Q86VF5 341 aa16.22■□□□□ 0.19
TMEFF1-201ENST00000374879 TMEM75Q8N9X5 138 aa16.22■□□□□ 0.19
TMEFF1-201ENST00000374879 ATP6V0E2Q8NHE4 81 aa16.22■□□□□ 0.19
TMEFF1-201ENST00000374879 DPM2O94777 84 aa16.22■□□□□ 0.19
TMEFF1-201ENST00000374879 CCL11P51671 97 aa16.22■□□□□ 0.19
TMEFF1-201ENST00000374879 HIGD1AQ9Y241 93 aa16.22■□□□□ 0.19
TMEFF1-201ENST00000374879 TRAV40A0A0B4J280 105 aa16.21■□□□□ 0.19
TMEFF1-201ENST00000374879 A0A1W2PPI3 338 aa16.21■□□□□ 0.19
TMEFF1-201ENST00000374879 B5MCH6 92 aa16.21■□□□□ 0.19
TMEFF1-201ENST00000374879 GAS8-AS1O95177 125 aa16.21■□□□□ 0.19
TMEFF1-201ENST00000374879 IGHG3P01860 377 aa16.21■□□□□ 0.19
TMEFF1-201ENST00000374879 CECR9P0C854 216 aa16.21■□□□□ 0.19
TMEFF1-201ENST00000374879 TMEM167AQ8TBQ9 72 aa16.21■□□□□ 0.19
TMEFF1-201ENST00000374879 BDP1A6H8Y1 2624 aa16.21■□□□□ 0.19
TMEFF1-201ENST00000374879 CRYGCP07315 174 aa16.21■□□□□ 0.19
TMEFF1-201ENST00000374879 LYZP61626 148 aa16.21■□□□□ 0.19
TMEFF1-201ENST00000374879 MORN3Q6PF18 240 aaPredicted RBP16.21■□□□□ 0.19
TMEFF1-201ENST00000374879 ABCA1O95477 2261 aa16.21■□□□□ 0.19
TMEFF1-201ENST00000374879 PRSS29PA6NIE9 313 aa16.2■□□□□ 0.18
TMEFF1-201ENST00000374879 APELAP0DMC3 54 aa16.2■□□□□ 0.18
TMEFF1-201ENST00000374879 C9orf106Q8NAJ2 232 aa16.2■□□□□ 0.18
TMEFF1-201ENST00000374879 PTH2Q96A98 100 aa16.2■□□□□ 0.18
TMEFF1-201ENST00000374879 TNFRSF13BO14836 293 aaPredicted RBP16.2■□□□□ 0.18
TMEFF1-201ENST00000374879 FDCSPQ8NFU4 85 aa16.2■□□□□ 0.18
TMEFF1-201ENST00000374879 UFC1Q9Y3C8 167 aa16.2■□□□□ 0.18
TMEFF1-201ENST00000374879 OR10X1Q8NGY0 326 aa16.19■□□□□ 0.18
TMEFF1-201ENST00000374879 SLC25A39Q9BZJ4 359 aaPredicted RBP16.19■□□□□ 0.18
TMEFF1-201ENST00000374879 RPUSD1Q9UJJ7 312 aaKnown RBP16.19■□□□□ 0.18
TMEFF1-201ENST00000374879 RALYQ9UKM9 306 aaKnown RBP16.19■□□□□ 0.18
TMEFF1-201ENST00000374879 TWIST1Q15672 202 aa16.19■□□□□ 0.18
TMEFF1-201ENST00000374879 ZNF833PQ6ZTB9 187 aa16.19■□□□□ 0.18
TMEFF1-201ENST00000374879 TRBV7-3A0A075B6L6 115 aa16.18■□□□□ 0.18
TMEFF1-201ENST00000374879 LINC01548A6NM66 108 aa16.18■□□□□ 0.18
TMEFF1-201ENST00000374879 HLA-DRB4P13762 266 aa16.18■□□□□ 0.18
TMEFF1-201ENST00000374879 CARD19Q96LW7 228 aa16.18■□□□□ 0.18
TMEFF1-201ENST00000374879 TPSG1Q9NRR2 321 aa16.18■□□□□ 0.18
TMEFF1-201ENST00000374879 HLA-DRB4X5D2U9 266 aa16.18■□□□□ 0.18
TMEFF1-201ENST00000374879 RBP4P02753 201 aa16.18■□□□□ 0.18
TMEFF1-201ENST00000374879 MAP1LC3AQ9H492 121 aa16.18■□□□□ 0.18
TMEFF1-201ENST00000374879 SMG1Q96Q15 3661 aaKnown RBP16.18■□□□□ 0.18
TMEFF1-201ENST00000374879 INTS1Q8N201 2190 aaKnown RBP16.18■□□□□ 0.18
TMEFF1-201ENST00000374879 MZT1Q08AG7 82 aa16.17■□□□□ 0.18
TMEFF1-201ENST00000374879 MSMPQ1L6U9 139 aa16.17■□□□□ 0.18
TMEFF1-201ENST00000374879 DEFB108BQ8NET1 73 aa16.17■□□□□ 0.18
TMEFF1-201ENST00000374879 TMEM158Q8WZ71 300 aa16.17■□□□□ 0.18
TMEFF1-201ENST00000374879 MRPL35Q9NZE8 188 aaKnown RBP16.17■□□□□ 0.18
TMEFF1-201ENST00000374879 TMEM14CQ9P0S9 112 aa16.17■□□□□ 0.18
TMEFF1-201ENST00000374879 C1orf162Q8NEQ5 155 aaPredicted RBP16.17■□□□□ 0.18
TMEFF1-201ENST00000374879 FAM90A27PA6NNH2 459 aa16.16■□□□□ 0.18
TMEFF1-201ENST00000374879 TMEM95Q3KNT9 176 aa16.16■□□□□ 0.18
TMEFF1-201ENST00000374879 MBNL2Q5VZF2 373 aaKnown RBP16.16■□□□□ 0.18
TMEFF1-201ENST00000374879 SFTA2Q6UW10 78 aa16.16■□□□□ 0.18
TMEFF1-201ENST00000374879 Q6ZS92 163 aa16.16■□□□□ 0.18
TMEFF1-201ENST00000374879 M0R3E3 92 aa16.16■□□□□ 0.18
TMEFF1-201ENST00000374879 HOXA3O43365 443 aaPredicted RBP16.16■□□□□ 0.18
TMEFF1-201ENST00000374879 LHBP01229 141 aa16.16■□□□□ 0.18
TMEFF1-201ENST00000374879 DIAPH2-AS1Q14236 149 aa16.16■□□□□ 0.18
TMEFF1-201ENST00000374879 TRBV19A0A075B6N1 114 aa16.15■□□□□ 0.18
TMEFF1-201ENST00000374879 DLX4Q92988 240 aaPredicted RBP16.15■□□□□ 0.18
TMEFF1-201ENST00000374879 TMEM133Q9H2Q1 129 aa16.15■□□□□ 0.18
TMEFF1-201ENST00000374879 SH2D1AO60880 128 aa16.15■□□□□ 0.18
TMEFF1-201ENST00000374879 IGLV2-23P01705 113 aa16.15■□□□□ 0.18
TMEFF1-201ENST00000374879 OR4C13Q8NGP0 309 aa16.15■□□□□ 0.18
TMEFF1-201ENST00000374879 SRSF8Q9BRL6 282 aaKnown RBP16.15■□□□□ 0.18
TMEFF1-201ENST00000374879 IGHV1-18A0A0C4DH31 117 aa16.15■□□□□ 0.18
TMEFF1-201ENST00000374879 ATP5LO75964 103 aa16.15■□□□□ 0.18
TMEFF1-201ENST00000374879 PSMB2P49721 201 aa16.15■□□□□ 0.18
TMEFF1-201ENST00000374879 HERV-K104P63124 156 aa16.15■□□□□ 0.18
TMEFF1-201ENST00000374879 SIGLEC15Q6ZMC9 328 aa16.15■□□□□ 0.18
TMEFF1-201ENST00000374879 MSRB1Q9NZV6 116 aa16.15■□□□□ 0.18
TMEFF1-201ENST00000374879 DMXL1Q9Y485 3027 aa16.14■□□□□ 0.17
TMEFF1-201ENST00000374879 ZNF318Q5VUA4 2279 aa16.14■□□□□ 0.17
TMEFF1-201ENST00000374879 LINC01546A6NGU7 62 aa16.14■□□□□ 0.17
TMEFF1-201ENST00000374879 IGLV1-44P01699 117 aa16.14■□□□□ 0.17
TMEFF1-201ENST00000374879 FAM216BQ8N7L0 139 aa16.14■□□□□ 0.17
TMEFF1-201ENST00000374879 RNF185Q96GF1 192 aa16.14■□□□□ 0.17
TMEFF1-201ENST00000374879 CCL13Q99616 98 aa16.14■□□□□ 0.17
TMEFF1-201ENST00000374879 TRBV7-9A0A0J9YWB2 115 aa16.14■□□□□ 0.17
TMEFF1-201ENST00000374879 ZFAND6Q6FIF0 208 aa16.14■□□□□ 0.17
TMEFF1-201ENST00000374879 DCHS1Q96JQ0 3298 aa16.13■□□□□ 0.17
TMEFF1-201ENST00000374879 NHLRC4P0CG21 123 aaPredicted RBP16.13■□□□□ 0.17
TMEFF1-201ENST00000374879 ZFP2Q6ZN57 461 aa16.13■□□□□ 0.17
TMEFF1-201ENST00000374879 CACNA1GO43497 2377 aa16.13■□□□□ 0.17
TMEFF1-201ENST00000374879 SPRY3O43610 288 aa16.13■□□□□ 0.17
TMEFF1-201ENST00000374879 IL4P05112 153 aa16.13■□□□□ 0.17
TMEFF1-201ENST00000374879 LINC00574Q9H8X3 128 aa16.13■□□□□ 0.17
TMEFF1-201ENST00000374879 NGBQ9NPG2 151 aa16.13■□□□□ 0.17
TMEFF1-201ENST00000374879 THBDP07204 575 aa16.12■□□□□ 0.17
TMEFF1-201ENST00000374879 GATA1P15976 413 aaPredicted RBP16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms