RNA–Protein interactions for RNA: ENST00000361198.9

LDB1-201, Transcript of LIM domain binding 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDB1, Length 2,285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-201ENST00000361198 CRXO43186 299 aaPredicted RBP17.6■□□□□ 0.41
LDB1-201ENST00000361198 BATFQ16520 125 aa17.6■□□□□ 0.41
LDB1-201ENST00000361198 C15orf32Q32M92 178 aa17.6■□□□□ 0.41
LDB1-201ENST00000361198 CLEC2AQ6UVW9 174 aa17.6■□□□□ 0.41
LDB1-201ENST00000361198 BRD3OSQ6XYD6 125 aa17.6■□□□□ 0.41
LDB1-201ENST00000361198 Q71RC1 249 aaPredicted RBP17.6■□□□□ 0.41
LDB1-201ENST00000361198 LYPD1Q8N2G4 141 aa17.6■□□□□ 0.41
LDB1-201ENST00000361198 IGHV4-30-2A0A087WSY4 118 aa17.6■□□□□ 0.41
LDB1-201ENST00000361198 MAJINQ3KP22 176 aa17.6■□□□□ 0.41
LDB1-201ENST00000361198 PRNTQ86SH4 94 aa17.6■□□□□ 0.41
LDB1-201ENST00000361198 TMEM219Q86XT9 240 aa17.6■□□□□ 0.41
LDB1-201ENST00000361198 LOC102724200A0A096LPH7 203 aaPredicted RBP17.59■□□□□ 0.41
LDB1-201ENST00000361198 TRAV40A0A0B4J280 105 aa17.59■□□□□ 0.41
LDB1-201ENST00000361198 IGHV1-69DA0A0B4J2H0 117 aa17.59■□□□□ 0.41
LDB1-201ENST00000361198 NDUFS8O00217 210 aa17.59■□□□□ 0.41
LDB1-201ENST00000361198 IGHV1-69P01742 117 aa17.59■□□□□ 0.41
LDB1-201ENST00000361198 HNRNPA3P51991 378 aaKnown RBP17.59■□□□□ 0.41
LDB1-201ENST00000361198 S100A7AQ86SG5 101 aa17.59■□□□□ 0.41
LDB1-201ENST00000361198 C5orf56Q8N8D9 126 aa17.59■□□□□ 0.41
LDB1-201ENST00000361198 TMEM75Q8N9X5 138 aa17.59■□□□□ 0.41
LDB1-201ENST00000361198 FOSL1P15407 271 aa17.59■□□□□ 0.41
LDB1-201ENST00000361198 ZFP30Q9Y2G7 519 aa17.59■□□□□ 0.41
LDB1-201ENST00000361198 LAMTOR2Q9Y2Q5 125 aa17.59■□□□□ 0.41
LDB1-201ENST00000361198 CSMD2Q7Z408 3487 aa17.58■□□□□ 0.41
LDB1-201ENST00000361198 IGHV3-35A0A0C4DH35 117 aa17.58■□□□□ 0.4
LDB1-201ENST00000361198 PRB1P04280 392 aa17.58■□□□□ 0.4
LDB1-201ENST00000361198 RHOGP84095 191 aa17.58■□□□□ 0.4
LDB1-201ENST00000361198 PRR31Q5SQ13 230 aa17.58■□□□□ 0.4
LDB1-201ENST00000361198 DMRTA1Q5VZB9 504 aa17.58■□□□□ 0.4
LDB1-201ENST00000361198 TMEM70Q9BUB7 260 aa17.58■□□□□ 0.4
LDB1-201ENST00000361198 MRPS16Q9Y3D3 137 aaKnown RBP17.58■□□□□ 0.4
LDB1-201ENST00000361198 ZNF502Q8TBZ5 544 aa17.58■□□□□ 0.4
LDB1-201ENST00000361198 M0R3E3 92 aa17.57■□□□□ 0.4
LDB1-201ENST00000361198 GPR183P32249 361 aa17.57■□□□□ 0.4
LDB1-201ENST00000361198 KLK9Q2XQG4 91 aa17.57■□□□□ 0.4
LDB1-201ENST00000361198 PIFOQ8TCI5 191 aa17.57■□□□□ 0.4
LDB1-201ENST00000361198 KLK9Q9UKQ9 250 aa17.57■□□□□ 0.4
LDB1-201ENST00000361198 ZNF462Q96JM2 2506 aa17.57■□□□□ 0.4
LDB1-201ENST00000361198 IGHV3OR16-8A0A075B7F1 116 aa17.56■□□□□ 0.4
LDB1-201ENST00000361198 SCGB2A1O75556 95 aa17.56■□□□□ 0.4
LDB1-201ENST00000361198 TSPOP30536 169 aa17.56■□□□□ 0.4
LDB1-201ENST00000361198 SPATA12Q7Z6I5 190 aa17.56■□□□□ 0.4
LDB1-201ENST00000361198 IGHV1-24A0A0C4DH33 117 aa17.56■□□□□ 0.4
LDB1-201ENST00000361198 CHEK1O14757 476 aa17.56■□□□□ 0.4
LDB1-201ENST00000361198 LINC00614P0C842 121 aa17.56■□□□□ 0.4
LDB1-201ENST00000361198 CYB5R2Q6BCY4 276 aa17.56■□□□□ 0.4
LDB1-201ENST00000361198 ZC2HC1AQ96GY0 325 aa17.56■□□□□ 0.4
LDB1-201ENST00000361198 CLEC5AQ9NY25 188 aa17.56■□□□□ 0.4
LDB1-201ENST00000361198 GOLT1BQ9Y3E0 138 aa17.56■□□□□ 0.4
LDB1-201ENST00000361198 IGLL1P15814 213 aa17.55■□□□□ 0.4
LDB1-201ENST00000361198 PDE6HQ13956 83 aa17.55■□□□□ 0.4
LDB1-201ENST00000361198 ASCL2Q99929 193 aa17.55■□□□□ 0.4
LDB1-201ENST00000361198 SPOCK3Q9BQ16 436 aa17.55■□□□□ 0.4
LDB1-201ENST00000361198 M0QZ24 198 aa17.55■□□□□ 0.4
LDB1-201ENST00000361198 CLEC3BP05452 202 aa17.55■□□□□ 0.4
LDB1-201ENST00000361198 IGHV4-38-2P0DP08 117 aa17.55■□□□□ 0.4
LDB1-201ENST00000361198 STPG4Q8N801 248 aa17.55■□□□□ 0.4
LDB1-201ENST00000361198 GATD1Q8NB37 220 aa17.55■□□□□ 0.4
LDB1-201ENST00000361198 NRGNQ92686 78 aa17.55■□□□□ 0.4
LDB1-201ENST00000361198 RABAC1Q9UI14 185 aa17.55■□□□□ 0.4
LDB1-201ENST00000361198 TFPI2P48307 235 aa17.54■□□□□ 0.4
LDB1-201ENST00000361198 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP17.54■□□□□ 0.4
LDB1-201ENST00000361198 K7EQM0 130 aa17.54■□□□□ 0.4
LDB1-201ENST00000361198 PSG3Q16557 428 aa17.54■□□□□ 0.4
LDB1-201ENST00000361198 PSG8Q9UQ74 426 aa17.54■□□□□ 0.4
LDB1-201ENST00000361198 MOB4Q9Y3A3 225 aa17.54■□□□□ 0.4
LDB1-201ENST00000361198 FAM208BQ5VWN6 2430 aa17.53■□□□□ 0.4
LDB1-201ENST00000361198 A0A1B0GUT8 65 aa17.53■□□□□ 0.4
LDB1-201ENST00000361198 NPSP0C0P6 89 aa17.53■□□□□ 0.4
LDB1-201ENST00000361198 RPL7P18124 248 aaKnown RBP17.53■□□□□ 0.4
LDB1-201ENST00000361198 SYS1-DBNDD2H3BUS1 97 aa17.52■□□□□ 0.4
LDB1-201ENST00000361198 OR5AL1P0C617 328 aa17.52■□□□□ 0.4
LDB1-201ENST00000361198 CCDC140Q96MF4 163 aa17.52■□□□□ 0.4
LDB1-201ENST00000361198 BBC3Q96PG8 261 aaPredicted RBP17.52■□□□□ 0.4
LDB1-201ENST00000361198 MEGF9Q9H1U4 602 aa17.52■□□□□ 0.4
LDB1-201ENST00000361198 AAMDCQ9H7C9 122 aa17.52■□□□□ 0.4
LDB1-201ENST00000361198 LEPROTL1O95214 131 aa17.52■□□□□ 0.4
LDB1-201ENST00000361198 CRIP1P50238 77 aa17.51■□□□□ 0.39
LDB1-201ENST00000361198 SMAD5-AS1Q9Y6J3 95 aa17.51■□□□□ 0.39
LDB1-201ENST00000361198 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP17.51■□□□□ 0.393e-7■■□□□ 13.4
LDB1-201ENST00000361198 CLEC19AQ6UXS0 136 aa17.51■□□□□ 0.39
LDB1-201ENST00000361198 ZFAND3Q9H8U3 227 aa17.51■□□□□ 0.39
LDB1-201ENST00000361198 LINC00527Q9UJ94 153 aa17.51■□□□□ 0.39
LDB1-201ENST00000361198 MSMBP08118 114 aa17.5■□□□□ 0.39
LDB1-201ENST00000361198 RIGQ13278 110 aa17.5■□□□□ 0.39
LDB1-201ENST00000361198 LRRK2Q5S007 2527 aa17.5■□□□□ 0.39
LDB1-201ENST00000361198 A0A1B0GW15 77 aa17.5■□□□□ 0.39
LDB1-201ENST00000361198 OR4C46A6NHA9 309 aa17.5■□□□□ 0.39
LDB1-201ENST00000361198 ARMS2P0C7Q2 107 aa17.5■□□□□ 0.39
LDB1-201ENST00000361198 LINC00173Q6ZV60 143 aa17.5■□□□□ 0.39
LDB1-201ENST00000361198 Q6AWC8 147 aa17.49■□□□□ 0.39
LDB1-201ENST00000361198 PSG9Q00887 426 aa17.49■□□□□ 0.39
LDB1-201ENST00000361198 ST20Q9HBF5 79 aa17.48■□□□□ 0.39
LDB1-201ENST00000361198 TRAV41A0A0B4J266 112 aa17.47■□□□□ 0.39
LDB1-201ENST00000361198 EEF1AKMT3Q96AZ1 226 aa17.47■□□□□ 0.39
LDB1-201ENST00000361198 CSPG4Q6UVK1 2322 aa17.47■□□□□ 0.39
LDB1-201ENST00000361198 LY6EQ16553 131 aa17.47■□□□□ 0.39
LDB1-201ENST00000361198 C19orf54Q5BKX5 351 aa17.47■□□□□ 0.39
LDB1-201ENST00000361198 CSN1S1P47710 185 aa17.46■□□□□ 0.39
LDB1-201ENST00000361198 IGFL4Q6B9Z1 124 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 178.7 ms