RNA–Protein interactions for RNA: ENST00000359895.6

PDLIM7-203, Transcript of PDZ and LIM domain 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDLIM7, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-203ENST00000359895 PPIFP30405 207 aaKnown RBP14.13□□□□□ -0.15
PDLIM7-203ENST00000359895 FOXA3P55318 350 aaPredicted RBP14.13□□□□□ -0.15
PDLIM7-203ENST00000359895 SLAQ13239 276 aa14.13□□□□□ -0.15
PDLIM7-203ENST00000359895 CDPF1Q6NVV7 123 aa14.13□□□□□ -0.15
PDLIM7-203ENST00000359895 BEX4Q9NWD9 120 aaPredicted RBP14.13□□□□□ -0.15
PDLIM7-203ENST00000359895 LINC00527Q9UJ94 153 aa14.13□□□□□ -0.15
PDLIM7-203ENST00000359895 ZNF580Q9UK33 172 aa14.13□□□□□ -0.15
PDLIM7-203ENST00000359895 LINC00310P59036 64 aa14.13□□□□□ -0.15
PDLIM7-203ENST00000359895 LOXL1Q08397 574 aaPredicted RBP14.13□□□□□ -0.15
PDLIM7-203ENST00000359895 GDF5OSQ5U4N7 250 aa14.13□□□□□ -0.15
PDLIM7-203ENST00000359895 PGLYRP4Q96LB8 373 aa14.13□□□□□ -0.15
PDLIM7-203ENST00000359895 U3KQE9 123 aa14.13□□□□□ -0.15
PDLIM7-203ENST00000359895 ARL3P36405 182 aa14.12□□□□□ -0.15
PDLIM7-203ENST00000359895 CAMPP49913 170 aa14.12□□□□□ -0.15
PDLIM7-203ENST00000359895 Q6AWC8 147 aa14.12□□□□□ -0.15
PDLIM7-203ENST00000359895 PRDM13Q9H4Q3 707 aa14.12□□□□□ -0.15
PDLIM7-203ENST00000359895 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.12□□□□□ -0.152e-7■■■□□ 16.9
PDLIM7-203ENST00000359895 IGKV2-40A0A087WW87 121 aaPredicted RBP14.11□□□□□ -0.15
PDLIM7-203ENST00000359895 A8MWP6 167 aa14.11□□□□□ -0.15
PDLIM7-203ENST00000359895 IGKV2D-40P01614 121 aaPredicted RBP14.11□□□□□ -0.15
PDLIM7-203ENST00000359895 IQCJQ1A5X6 159 aa14.11□□□□□ -0.15
PDLIM7-203ENST00000359895 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa14.11□□□□□ -0.15
PDLIM7-203ENST00000359895 RBAKDNA6NC62 111 aa14.1□□□□□ -0.15
PDLIM7-203ENST00000359895 HAX1O00165 279 aa14.1□□□□□ -0.15
PDLIM7-203ENST00000359895 KLF5Q13887 457 aaPredicted RBP14.1□□□□□ -0.15
PDLIM7-203ENST00000359895 LCN12Q6JVE5 192 aa14.1□□□□□ -0.15
PDLIM7-203ENST00000359895 LRRC75A-AS1Q8N1F1 130 aa14.1□□□□□ -0.15
PDLIM7-203ENST00000359895 KCNS1Q96KK3 526 aa14.1□□□□□ -0.15
PDLIM7-203ENST00000359895 C8orf49Q96NF6 230 aa14.1□□□□□ -0.15
PDLIM7-203ENST00000359895 PRR25Q96S07 402 aa14.1□□□□□ -0.15
PDLIM7-203ENST00000359895 SAMD10Q9BYL1 202 aa14.1□□□□□ -0.15
PDLIM7-203ENST00000359895 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP14.09□□□□□ -0.15
PDLIM7-203ENST00000359895 A0A0G2JLM5 398 aa14.09□□□□□ -0.15
PDLIM7-203ENST00000359895 A0A1B0GW15 77 aa14.09□□□□□ -0.15
PDLIM7-203ENST00000359895 NDUFA4O00483 81 aa14.09□□□□□ -0.15
PDLIM7-203ENST00000359895 IGHG4P01861 327 aa14.09□□□□□ -0.15
PDLIM7-203ENST00000359895 MRPL53Q96EL3 112 aaKnown RBP14.09□□□□□ -0.15
PDLIM7-203ENST00000359895 NDFIP1Q9BT67 221 aa14.09□□□□□ -0.15
PDLIM7-203ENST00000359895 CLEC5AQ9NY25 188 aa14.09□□□□□ -0.15
PDLIM7-203ENST00000359895 CENPEQ02224 2701 aa14.09□□□□□ -0.15
PDLIM7-203ENST00000359895 LINC00587B1AMM8 73 aa14.09□□□□□ -0.15
PDLIM7-203ENST00000359895 F2Z2F3 143 aa14.09□□□□□ -0.15
PDLIM7-203ENST00000359895 TGFAP01135 160 aa14.09□□□□□ -0.15
PDLIM7-203ENST00000359895 CRIP1P50238 77 aa14.09□□□□□ -0.15
PDLIM7-203ENST00000359895 PKIAP61925 76 aa14.09□□□□□ -0.15
PDLIM7-203ENST00000359895 BLCAPP62952 87 aa14.09□□□□□ -0.15
PDLIM7-203ENST00000359895 RIGQ13278 110 aa14.09□□□□□ -0.15
PDLIM7-203ENST00000359895 FAM162BQ5T6X4 162 aa14.09□□□□□ -0.15
PDLIM7-203ENST00000359895 Q71RC1 249 aaPredicted RBP14.09□□□□□ -0.15
PDLIM7-203ENST00000359895 C18orf32Q8TCD1 76 aa14.09□□□□□ -0.15
PDLIM7-203ENST00000359895 CELSR2Q9HCU4 2923 aa14.08□□□□□ -0.16
PDLIM7-203ENST00000359895 A0A1B0GUT8 65 aa14.08□□□□□ -0.16
PDLIM7-203ENST00000359895 CYSRT1A8MQ03 144 aa14.08□□□□□ -0.16
PDLIM7-203ENST00000359895 IGLV1-40P01703 118 aa14.08□□□□□ -0.16
PDLIM7-203ENST00000359895 PF4V1P10720 104 aa14.08□□□□□ -0.16
PDLIM7-203ENST00000359895 BMI1P35226 326 aa14.08□□□□□ -0.16
PDLIM7-203ENST00000359895 SIGLECL1Q8N7X8 197 aa14.08□□□□□ -0.16
PDLIM7-203ENST00000359895 ALKBH7Q9BT30 221 aaPredicted RBP14.08□□□□□ -0.16
PDLIM7-203ENST00000359895 TMEM189A5PLL7 270 aa14.07□□□□□ -0.16
PDLIM7-203ENST00000359895 TSTD3H0UI37 97 aa14.07□□□□□ -0.16
PDLIM7-203ENST00000359895 APOHP02749 345 aaPredicted RBP14.07□□□□□ -0.16
PDLIM7-203ENST00000359895 RPS20P60866 119 aaKnown RBP14.07□□□□□ -0.16
PDLIM7-203ENST00000359895 DEFB113Q30KQ7 82 aa14.07□□□□□ -0.16
PDLIM7-203ENST00000359895 DEFB112Q30KQ8 113 aa14.07□□□□□ -0.16
PDLIM7-203ENST00000359895 BORCS7Q96B45 105 aa14.07□□□□□ -0.16
PDLIM7-203ENST00000359895 SSBP4Q9BWG4 385 aaPredicted RBP14.07□□□□□ -0.16
PDLIM7-203ENST00000359895 SH2D1AO60880 128 aa14.06□□□□□ -0.16
PDLIM7-203ENST00000359895 GPX1P07203 203 aa14.06□□□□□ -0.16
PDLIM7-203ENST00000359895 HLA-DMBP28068 263 aa14.06□□□□□ -0.16
PDLIM7-203ENST00000359895 FAM209BQ5JX69 171 aa14.06□□□□□ -0.16
PDLIM7-203ENST00000359895 GATD1Q8NB37 220 aa14.06□□□□□ -0.16
PDLIM7-203ENST00000359895 ASCL2Q99929 193 aa14.06□□□□□ -0.16
PDLIM7-203ENST00000359895 VGLL1Q99990 258 aa14.06□□□□□ -0.16
PDLIM7-203ENST00000359895 IGHV3-66A0A0C4DH42 116 aa14.05□□□□□ -0.16
PDLIM7-203ENST00000359895 A0A1W2PS18 150 aa14.05□□□□□ -0.16
PDLIM7-203ENST00000359895 ZNF705FA8MVS1 300 aaPredicted RBP14.05□□□□□ -0.16
PDLIM7-203ENST00000359895 RNF223E7ERA6 249 aa14.05□□□□□ -0.16
PDLIM7-203ENST00000359895 ZNF207O43670 478 aaKnown RBP14.05□□□□□ -0.16
PDLIM7-203ENST00000359895 SCGB1D1O95968 90 aa14.05□□□□□ -0.16
PDLIM7-203ENST00000359895 SRSF2Q01130 221 aaKnown RBP14.05□□□□□ -0.16
PDLIM7-203ENST00000359895 CFHR3Q02985 330 aa14.05□□□□□ -0.16
PDLIM7-203ENST00000359895 IGFL4Q6B9Z1 124 aa14.05□□□□□ -0.16
PDLIM7-203ENST00000359895 NAGKQ9UJ70 344 aa14.05□□□□□ -0.16
PDLIM7-203ENST00000359895 CR1P17927 2039 aa14.05□□□□□ -0.16
PDLIM7-203ENST00000359895 ZNF324O75467 553 aaPredicted RBP14.05□□□□□ -0.16
PDLIM7-203ENST00000359895 IGHV4-31P0DP07 118 aa14.05□□□□□ -0.16
PDLIM7-203ENST00000359895 GLMPQ8WWB7 406 aa14.05□□□□□ -0.16
PDLIM7-203ENST00000359895 RCHY1Q96PM5 261 aa14.05□□□□□ -0.16
PDLIM7-203ENST00000359895 IGHV3OR16-13A0A075B7E8 117 aa14.04□□□□□ -0.16
PDLIM7-203ENST00000359895 IGHV3-74A0A0B4J1X5 117 aa14.04□□□□□ -0.16
PDLIM7-203ENST00000359895 TMEM89A2RUT3 159 aa14.04□□□□□ -0.16
PDLIM7-203ENST00000359895 FSHBP01225 129 aa14.04□□□□□ -0.16
PDLIM7-203ENST00000359895 IGHV4-59P01825 116 aa14.04□□□□□ -0.16
PDLIM7-203ENST00000359895 PRB4P10163 310 aaPredicted RBP14.04□□□□□ -0.16
PDLIM7-203ENST00000359895 AMTP48728 403 aa14.04□□□□□ -0.16
PDLIM7-203ENST00000359895 C8orf86Q6ZUL3 223 aa14.04□□□□□ -0.16
PDLIM7-203ENST00000359895 C9orf139Q6ZV77 190 aa14.04□□□□□ -0.16
PDLIM7-203ENST00000359895 Q6ZWC4 215 aa14.04□□□□□ -0.16
PDLIM7-203ENST00000359895 OR4X2Q8NGF9 303 aa14.04□□□□□ -0.16
PDLIM7-203ENST00000359895 SPG11Q96JI7 2443 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms