RNA–Protein interactions for RNA: ENST00000347662.8

TRAF3-201, Transcript of TNF receptor associated factor 3, humanhuman

TSL 5 BASIC

Gene TRAF3, Length 7,700 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-201ENST00000347662 KLK9Q9UKQ9 250 aa9.65□□□□□ -0.87
TRAF3-201ENST00000347662 RNF223E7ERA6 249 aa9.64□□□□□ -0.87
TRAF3-201ENST00000347662 BUB3O43684 328 aa9.64□□□□□ -0.87
TRAF3-201ENST00000347662 KIR3DS1Q14943 382 aa9.64□□□□□ -0.87
TRAF3-201ENST00000347662 LINC00271P0C7V0 271 aa9.64□□□□□ -0.87
TRAF3-201ENST00000347662 SPATA25Q9BR10 227 aa9.64□□□□□ -0.87
TRAF3-201ENST00000347662 IGHV2-26A0A0B4J1V2 119 aa9.64□□□□□ -0.87
TRAF3-201ENST00000347662 TIRAPP58753 221 aa9.64□□□□□ -0.87
TRAF3-201ENST00000347662 SPINK13Q1W4C9 94 aa9.64□□□□□ -0.87
TRAF3-201ENST00000347662 TRPT1Q86TN4 253 aaKnown RBP9.64□□□□□ -0.87
TRAF3-201ENST00000347662 TMEM243Q9BU79 118 aa9.64□□□□□ -0.87
TRAF3-201ENST00000347662 VSIRQ9H7M9 311 aa9.64□□□□□ -0.87
TRAF3-201ENST00000347662 SHISA9B4DS77 424 aa9.64□□□□□ -0.87
TRAF3-201ENST00000347662 PIN1P1O15428 100 aa9.64□□□□□ -0.87
TRAF3-201ENST00000347662 EFNB3Q15768 340 aa9.64□□□□□ -0.87
TRAF3-201ENST00000347662 KIF26AQ9ULI4 1882 aaPredicted RBP9.64□□□□□ -0.87
TRAF3-201ENST00000347662 YPEL1O60688 119 aa9.64□□□□□ -0.87
TRAF3-201ENST00000347662 IGKV1-39P01597 117 aa9.64□□□□□ -0.87
TRAF3-201ENST00000347662 IGKV1D-39P04432 117 aa9.64□□□□□ -0.87
TRAF3-201ENST00000347662 YPEL2Q96QA6 119 aa9.64□□□□□ -0.87
TRAF3-201ENST00000347662 LY6HO94772 140 aa9.64□□□□□ -0.87
TRAF3-201ENST00000347662 ETDCA0A1B0GVM5 59 aa9.63□□□□□ -0.87
TRAF3-201ENST00000347662 RNF183Q96D59 192 aa9.63□□□□□ -0.87
TRAF3-201ENST00000347662 MCRIP2Q9BUT9 160 aaKnown RBP9.63□□□□□ -0.87
TRAF3-201ENST00000347662 PLXNA4Q9HCM2 1894 aa9.63□□□□□ -0.87
TRAF3-201ENST00000347662 OSTCQ9NRP0 149 aa9.63□□□□□ -0.87
TRAF3-201ENST00000347662 ZNF672Q499Z4 452 aaPredicted RBP9.63□□□□□ -0.87
TRAF3-201ENST00000347662 IGHV1-18A0A0C4DH31 117 aa9.63□□□□□ -0.87
TRAF3-201ENST00000347662 A0A0J9YY99 117 aa9.63□□□□□ -0.87
TRAF3-201ENST00000347662 IFITM1P13164 125 aa9.63□□□□□ -0.87
TRAF3-201ENST00000347662 A0A0G2JNJ9 132 aa9.63□□□□□ -0.87
TRAF3-201ENST00000347662 UBE2AP49459 152 aa9.63□□□□□ -0.87
TRAF3-201ENST00000347662 Q9UFV3 132 aa9.63□□□□□ -0.87
TRAF3-201ENST00000347662 CASC2Q6XLA1 102 aa9.63□□□□□ -0.87
TRAF3-201ENST00000347662 Q96MF0 132 aa9.62□□□□□ -0.87
TRAF3-201ENST00000347662 MRPS18CQ9Y3D5 142 aaKnown RBP9.62□□□□□ -0.87
TRAF3-201ENST00000347662 Q0VFX4 171 aa9.62□□□□□ -0.87
TRAF3-201ENST00000347662 C1orf100Q5SVJ3 147 aa9.62□□□□□ -0.87
TRAF3-201ENST00000347662 CCDC168Q8NDH2 2452 aa9.62□□□□□ -0.87
TRAF3-201ENST00000347662 FAM90A1Q86YD7 464 aa9.62□□□□□ -0.87
TRAF3-201ENST00000347662 RHPN1-AS1Q9BWJ2 59 aa9.62□□□□□ -0.87
TRAF3-201ENST00000347662 ADAMTS9Q9P2N4 1935 aa9.62□□□□□ -0.87
TRAF3-201ENST00000347662 EFNA2O43921 213 aa9.62□□□□□ -0.87
TRAF3-201ENST00000347662 ZNRF2Q8NHG8 242 aa9.62□□□□□ -0.87
TRAF3-201ENST00000347662 ZNF525Q8N782 197 aa9.62□□□□□ -0.87
TRAF3-201ENST00000347662 USMG5Q96IX5 58 aa9.62□□□□□ -0.87
TRAF3-201ENST00000347662 PLXNA3P51805 1871 aa9.62□□□□□ -0.87
TRAF3-201ENST00000347662 XCL1P47992 114 aa9.61□□□□□ -0.87
TRAF3-201ENST00000347662 UBE2E1P51965 193 aa9.61□□□□□ -0.87
TRAF3-201ENST00000347662 EFNA4P52798 201 aa9.61□□□□□ -0.87
TRAF3-201ENST00000347662 LINC01559Q495D7 138 aa9.61□□□□□ -0.87
TRAF3-201ENST00000347662 LINC01619G3V211 115 aa9.61□□□□□ -0.87
TRAF3-201ENST00000347662 Q6ZQT7 251 aa9.61□□□□□ -0.87
TRAF3-201ENST00000347662 TRBV5-7A0A0A0MS05 114 aa9.61□□□□□ -0.87
TRAF3-201ENST00000347662 NDUFC2O95298 119 aa9.61□□□□□ -0.87
TRAF3-201ENST00000347662 C1QTNF5Q9BXJ0 243 aa9.61□□□□□ -0.87
TRAF3-201ENST00000347662 TP53TG1Q9Y2A0 90 aa9.61□□□□□ -0.87
TRAF3-201ENST00000347662 SORL1Q92673 2214 aa9.6□□□□□ -0.87
TRAF3-201ENST00000347662 TRBV20-1A0A075B6N2 111 aa9.6□□□□□ -0.87
TRAF3-201ENST00000347662 FAM223BA6NKX1 122 aa9.6□□□□□ -0.87
TRAF3-201ENST00000347662 PROP1O75360 226 aa9.6□□□□□ -0.87
TRAF3-201ENST00000347662 FAM223AQ8IWN6 122 aa9.6□□□□□ -0.87
TRAF3-201ENST00000347662 FUSP35637 526 aaKnown RBP eCLIP9.6□□□□□ -0.87
TRAF3-201ENST00000347662 C9orf47Q6ZRZ4 202 aa9.6□□□□□ -0.87
TRAF3-201ENST00000347662 IL17RELQ6ZVW7 336 aa9.6□□□□□ -0.87
TRAF3-201ENST00000347662 FGFBP3Q8TAT2 258 aa9.6□□□□□ -0.87
TRAF3-201ENST00000347662 PLPPR1Q8TBJ4 325 aa9.6□□□□□ -0.87
TRAF3-201ENST00000347662 A8MWP6 167 aa9.6□□□□□ -0.87
TRAF3-201ENST00000347662 TMEM200BQ69YZ2 307 aa9.6□□□□□ -0.87
TRAF3-201ENST00000347662 NLRC5Q86WI3 1866 aa9.6□□□□□ -0.87
TRAF3-201ENST00000347662 RHODO00212 210 aa9.6□□□□□ -0.87
TRAF3-201ENST00000347662 C20orf204Q6ZNR8 217 aa9.6□□□□□ -0.87
TRAF3-201ENST00000347662 GAGE12HA6NDE8 117 aa9.6□□□□□ -0.87
TRAF3-201ENST00000347662 MP68P56378 58 aa9.6□□□□□ -0.87
TRAF3-201ENST00000347662 RPRMLQ8N4K4 120 aa9.6□□□□□ -0.87
TRAF3-201ENST00000347662 TMEM242Q9NWH2 141 aa9.6□□□□□ -0.87
TRAF3-201ENST00000347662 ACYP1P07311 99 aa9.6□□□□□ -0.87
TRAF3-201ENST00000347662 C9orf139Q6ZV77 190 aa9.6□□□□□ -0.87
TRAF3-201ENST00000347662 A0A087WWC5 75 aa9.59□□□□□ -0.87
TRAF3-201ENST00000347662 IGHV1-3A0A0C4DH29 117 aa9.59□□□□□ -0.87
TRAF3-201ENST00000347662 I3L3M4 83 aa9.59□□□□□ -0.87
TRAF3-201ENST00000347662 IGKV4-1P06312 121 aa9.59□□□□□ -0.87
TRAF3-201ENST00000347662 CRYBA4P53673 196 aa9.59□□□□□ -0.87
TRAF3-201ENST00000347662 DOPEY1Q5JWR5 2465 aa9.59□□□□□ -0.87
TRAF3-201ENST00000347662 K7ERS5 55 aa9.59□□□□□ -0.87
TRAF3-201ENST00000347662 TIMP3P35625 211 aa9.59□□□□□ -0.87
TRAF3-201ENST00000347662 UTF1Q5T230 341 aa9.59□□□□□ -0.87
TRAF3-201ENST00000347662 K7ENP7 123 aa9.59□□□□□ -0.87
TRAF3-201ENST00000347662 IL18BPO95998 194 aa9.59□□□□□ -0.87
TRAF3-201ENST00000347662 C10orf55Q5SWW7 151 aa9.59□□□□□ -0.87
TRAF3-201ENST00000347662 PKIGQ9Y2B9 76 aa9.59□□□□□ -0.87
TRAF3-201ENST00000347662 FGF6P10767 208 aa9.59□□□□□ -0.87
TRAF3-201ENST00000347662 Q5BKY6 102 aa9.59□□□□□ -0.87
TRAF3-201ENST00000347662 RNASE13Q5GAN3 156 aaKnown RBP9.59□□□□□ -0.87
TRAF3-201ENST00000347662 FAM104BQ5XKR9 115 aa9.59□□□□□ -0.87
TRAF3-201ENST00000347662 RUSC1-AS1Q66K80 236 aa9.59□□□□□ -0.87
TRAF3-201ENST00000347662 HLA-DRB4P13762 266 aa9.59□□□□□ -0.87
TRAF3-201ENST00000347662 HLA-DRB4X5D2U9 266 aa9.59□□□□□ -0.87
TRAF3-201ENST00000347662 LRCOL1A6NCL2 159 aa9.58□□□□□ -0.88
TRAF3-201ENST00000347662 H0Y9J4 135 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 129.6 ms