RNA–Protein interactions for RNA: ENST00000340384.4

TUBB4B-201, Transcript of tubulin beta 4B class IVb, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBB4B, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB4B-201ENST00000340384 RASL11AQ6T310 242 aa11.74□□□□□ -0.53
TUBB4B-201ENST00000340384 NUDT10Q8NFP7 164 aa11.74□□□□□ -0.53
TUBB4B-201ENST00000340384 NUDT11Q96G61 164 aa11.74□□□□□ -0.53
TUBB4B-201ENST00000340384 GNB1LQ9BYB4 327 aa11.74□□□□□ -0.53
TUBB4B-201ENST00000340384 JMJD1CQ15652 2540 aa11.74□□□□□ -0.53
TUBB4B-201ENST00000340384 XKRY2A2RUG3 117 aa11.73□□□□□ -0.53
TUBB4B-201ENST00000340384 COA6Q5JTJ3 125 aaKnown RBP11.73□□□□□ -0.53
TUBB4B-201ENST00000340384 FAM209BQ5JX69 171 aa11.73□□□□□ -0.53
TUBB4B-201ENST00000340384 OR4B1Q8NGF8 309 aa11.73□□□□□ -0.53
TUBB4B-201ENST00000340384 NAT8BQ9UHF3 227 aa11.73□□□□□ -0.53
TUBB4B-201ENST00000340384 A0A087X0K7 114 aa11.72□□□□□ -0.53
TUBB4B-201ENST00000340384 A0A0G2JLM5 398 aa11.72□□□□□ -0.53
TUBB4B-201ENST00000340384 DIRC3C9JPN6 131 aa11.72□□□□□ -0.53
TUBB4B-201ENST00000340384 P01737 135 aa11.72□□□□□ -0.53
TUBB4B-201ENST00000340384 PSG3Q16557 428 aa11.72□□□□□ -0.53
TUBB4B-201ENST00000340384 PRNTQ86SH4 94 aa11.72□□□□□ -0.53
TUBB4B-201ENST00000340384 TSKUQ8WUA8 353 aa11.72□□□□□ -0.53
TUBB4B-201ENST00000340384 C17orf77Q96MU5 243 aa11.72□□□□□ -0.53
TUBB4B-201ENST00000340384 C12orf57Q99622 126 aa11.72□□□□□ -0.53
TUBB4B-201ENST00000340384 RPP21Q9H633 154 aaKnown RBP11.72□□□□□ -0.53
TUBB4B-201ENST00000340384 FAM181BA6NEQ2 426 aa11.71□□□□□ -0.53
TUBB4B-201ENST00000340384 A8MWL6 223 aa11.71□□□□□ -0.53
TUBB4B-201ENST00000340384 RNASE1P07998 156 aaKnown RBP11.71□□□□□ -0.53
TUBB4B-201ENST00000340384 PPIFP30405 207 aaKnown RBP11.71□□□□□ -0.53
TUBB4B-201ENST00000340384 ARL3P36405 182 aa11.71□□□□□ -0.53
TUBB4B-201ENST00000340384 HIST3H2BBQ8N257 126 aa11.71□□□□□ -0.53
TUBB4B-201ENST00000340384 GBGT1Q8N5D6 347 aa11.71□□□□□ -0.53
TUBB4B-201ENST00000340384 SLC50A1Q9BRV3 221 aa11.71□□□□□ -0.53
TUBB4B-201ENST00000340384 MRPL18Q9H0U6 180 aaKnown RBP11.71□□□□□ -0.53
TUBB4B-201ENST00000340384 ZNF331Q9NQX6 463 aaPredicted RBP11.71□□□□□ -0.53
TUBB4B-201ENST00000340384 PSG8Q9UQ74 426 aa11.71□□□□□ -0.53
TUBB4B-201ENST00000340384 ZNF785A8K8V0 405 aa11.71□□□□□ -0.54
TUBB4B-201ENST00000340384 SNURFLB1AK76 121 aa11.71□□□□□ -0.54
TUBB4B-201ENST00000340384 HLA-DQA1P01909 254 aa11.71□□□□□ -0.54
TUBB4B-201ENST00000340384 LURAP1LQ8IV03 231 aa11.71□□□□□ -0.54
TUBB4B-201ENST00000340384 SGK494Q96LW2 274 aa11.71□□□□□ -0.54
TUBB4B-201ENST00000340384 GFRA4Q9GZZ7 299 aa11.71□□□□□ -0.54
TUBB4B-201ENST00000340384 FAM231BA6NCW3 169 aa11.7□□□□□ -0.54
TUBB4B-201ENST00000340384 TCF21O43680 179 aa11.7□□□□□ -0.54
TUBB4B-201ENST00000340384 BUB3O43684 328 aa11.7□□□□□ -0.54
TUBB4B-201ENST00000340384 IGLV2-11P01706 119 aa11.7□□□□□ -0.54
TUBB4B-201ENST00000340384 CBLN1P23435 193 aa11.7□□□□□ -0.54
TUBB4B-201ENST00000340384 TCL1AP56279 114 aa11.7□□□□□ -0.54
TUBB4B-201ENST00000340384 ATP5L2Q7Z4Y8 100 aa11.7□□□□□ -0.54
TUBB4B-201ENST00000340384 PRIMA1Q86XR5 153 aa11.7□□□□□ -0.54
TUBB4B-201ENST00000340384 LINC00527Q9UJ94 153 aa11.7□□□□□ -0.54
TUBB4B-201ENST00000340384 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.69□□□□□ -0.54
TUBB4B-201ENST00000340384 IGHV3-35A0A0C4DH35 117 aa11.69□□□□□ -0.54
TUBB4B-201ENST00000340384 TMEM89A2RUT3 159 aa11.69□□□□□ -0.54
TUBB4B-201ENST00000340384 C19orf71A6NCJ1 209 aa11.69□□□□□ -0.54
TUBB4B-201ENST00000340384 NDUFA4O00483 81 aa11.69□□□□□ -0.54
TUBB4B-201ENST00000340384 CT45A10P0DMU9 189 aa11.69□□□□□ -0.54
TUBB4B-201ENST00000340384 PF4V1P10720 104 aa11.69□□□□□ -0.54
TUBB4B-201ENST00000340384 WIPF2Q8TF74 440 aaPredicted RBP11.69□□□□□ -0.54
TUBB4B-201ENST00000340384 PRSS22Q9GZN4 317 aa11.69□□□□□ -0.54
TUBB4B-201ENST00000340384 ZNF702PQ9H963 129 aa11.69□□□□□ -0.54
TUBB4B-201ENST00000340384 CLEC5AQ9NY25 188 aa11.69□□□□□ -0.54
TUBB4B-201ENST00000340384 IGLV1-40P01703 118 aa11.68□□□□□ -0.54
TUBB4B-201ENST00000340384 SAPCD1Q5SSQ6 148 aa11.68□□□□□ -0.54
TUBB4B-201ENST00000340384 C2CD3Q4AC94 2353 aa11.68□□□□□ -0.54
TUBB4B-201ENST00000340384 TRAV8-1A0A0A6YYK1 113 aa11.68□□□□□ -0.54
TUBB4B-201ENST00000340384 Q6ZSV7 163 aa11.68□□□□□ -0.54
TUBB4B-201ENST00000340384 NOL4LQ96MY1 436 aaPredicted RBP11.68□□□□□ -0.54
TUBB4B-201ENST00000340384 GPR61Q9BZJ8 451 aa11.68□□□□□ -0.54
TUBB4B-201ENST00000340384 SMAD5-AS1Q9Y6J3 95 aa11.68□□□□□ -0.54
TUBB4B-201ENST00000340384 FBN1P35555 2871 aaKnown RBP11.67□□□□□ -0.54
TUBB4B-201ENST00000340384 CLPSL1A2RUU4 121 aa11.67□□□□□ -0.54
TUBB4B-201ENST00000340384 NPIPB6E9PJ23 425 aa11.67□□□□□ -0.54
TUBB4B-201ENST00000340384 M0R3E3 92 aa11.67□□□□□ -0.54
TUBB4B-201ENST00000340384 CA1P00915 261 aaPredicted RBP11.67□□□□□ -0.54
TUBB4B-201ENST00000340384 RAB4BP61018 213 aa11.67□□□□□ -0.54
TUBB4B-201ENST00000340384 TMEM95Q3KNT9 176 aa11.67□□□□□ -0.54
TUBB4B-201ENST00000340384 TMEM136Q6ZRR5 245 aa11.67□□□□□ -0.54
TUBB4B-201ENST00000340384 Q8N2B8 174 aa11.67□□□□□ -0.54
TUBB4B-201ENST00000340384 NUP35Q8NFH5 326 aa11.67□□□□□ -0.54
TUBB4B-201ENST00000340384 JMJD8Q96S16 334 aa11.67□□□□□ -0.54
TUBB4B-201ENST00000340384 NEU1Q99519 415 aa11.67□□□□□ -0.54
TUBB4B-201ENST00000340384 NDFIP1Q9BT67 221 aa11.67□□□□□ -0.54
TUBB4B-201ENST00000340384 U3KQE9 123 aa11.67□□□□□ -0.54
TUBB4B-201ENST00000340384 A0A1W2PS18 150 aa11.66□□□□□ -0.54
TUBB4B-201ENST00000340384 HIGD1CA8MV81 97 aa11.66□□□□□ -0.54
TUBB4B-201ENST00000340384 CHEK1O14757 476 aa11.66□□□□□ -0.54
TUBB4B-201ENST00000340384 CFHR3Q02985 330 aa11.66□□□□□ -0.54
TUBB4B-201ENST00000340384 MRPL54Q6P161 138 aaKnown RBP11.66□□□□□ -0.54
TUBB4B-201ENST00000340384 TMEM18Q96B42 140 aa11.66□□□□□ -0.54
TUBB4B-201ENST00000340384 MRPL53Q96EL3 112 aaKnown RBP11.66□□□□□ -0.54
TUBB4B-201ENST00000340384 IGHV3OR16-8A0A075B7F1 116 aa11.65□□□□□ -0.54
TUBB4B-201ENST00000340384 SPINK4O60575 86 aa11.65□□□□□ -0.54
TUBB4B-201ENST00000340384 FABP4P15090 132 aa11.65□□□□□ -0.54
TUBB4B-201ENST00000340384 CRISP2P16562 243 aa11.65□□□□□ -0.54
TUBB4B-201ENST00000340384 PDZD11Q5EBL8 140 aa11.65□□□□□ -0.54
TUBB4B-201ENST00000340384 GFI1BQ5VTD9 330 aa11.65□□□□□ -0.54
TUBB4B-201ENST00000340384 OR4X2Q8NGF9 303 aa11.65□□□□□ -0.54
TUBB4B-201ENST00000340384 NPFFR1Q9GZQ6 430 aa11.65□□□□□ -0.54
TUBB4B-201ENST00000340384 RBAKDNA6NC62 111 aa11.64□□□□□ -0.55
TUBB4B-201ENST00000340384 IFITM10A6NMD0 228 aa11.64□□□□□ -0.55
TUBB4B-201ENST00000340384 SLC35B1P78383 322 aa11.64□□□□□ -0.55
TUBB4B-201ENST00000340384 C16orf54Q6UWD8 224 aa11.64□□□□□ -0.55
TUBB4B-201ENST00000340384 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.64□□□□□ -0.55
TUBB4B-201ENST00000340384 RBPMS2Q6ZRY4 209 aaKnown RBP11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 146.6 ms