RNA–Protein interactions for RNA: ENST00000337331.9

NPHP3-201, Transcript of nephrocystin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP3, Length 4,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-201ENST00000337331 FXYD2P54710 66 aa12.98□□□□□ -0.33
NPHP3-201ENST00000337331 ADIPOQQ15848 244 aa12.98□□□□□ -0.33
NPHP3-201ENST00000337331 DUX5Q96PT3 197 aa12.98□□□□□ -0.33
NPHP3-201ENST00000337331 TTTY13Q9BZ97 58 aa12.98□□□□□ -0.33
NPHP3-201ENST00000337331 IGKV1-16P04430 117 aa12.98□□□□□ -0.33
NPHP3-201ENST00000337331 C10orf126Q8N4M7 172 aa12.98□□□□□ -0.33
NPHP3-201ENST00000337331 HAX1O00165 279 aa12.97□□□□□ -0.33
NPHP3-201ENST00000337331 ZNF672Q499Z4 452 aaPredicted RBP12.97□□□□□ -0.33
NPHP3-201ENST00000337331 GLMPQ8WWB7 406 aa12.97□□□□□ -0.33
NPHP3-201ENST00000337331 ARMS2P0C7Q2 107 aa12.97□□□□□ -0.33
NPHP3-201ENST00000337331 PSMG4Q5JS54 123 aa12.97□□□□□ -0.33
NPHP3-201ENST00000337331 ANKHD1Q8IWZ3 2542 aaKnown RBP12.97□□□□□ -0.33
NPHP3-201ENST00000337331 TMEM178BH3BS89 294 aa12.97□□□□□ -0.33
NPHP3-201ENST00000337331 CCL19Q99731 98 aa12.97□□□□□ -0.33
NPHP3-201ENST00000337331 LINC00527Q9UJ94 153 aa12.97□□□□□ -0.33
NPHP3-201ENST00000337331 CUL9Q8IWT3 2517 aa12.97□□□□□ -0.33
NPHP3-201ENST00000337331 FREM1Q5H8C1 2179 aa12.96□□□□□ -0.33
NPHP3-201ENST00000337331 IGKV3OR2-268A0A0C4DH90 116 aa12.96□□□□□ -0.33
NPHP3-201ENST00000337331 SMKR1H3BMG3 65 aa12.96□□□□□ -0.33
NPHP3-201ENST00000337331 EVI2AP22794 236 aa12.96□□□□□ -0.33
NPHP3-201ENST00000337331 PPP1R17O96001 155 aa12.96□□□□□ -0.33
NPHP3-201ENST00000337331 CFHR2P36980 270 aa12.96□□□□□ -0.33
NPHP3-201ENST00000337331 SLC50A1Q9BRV3 221 aa12.96□□□□□ -0.33
NPHP3-201ENST00000337331 PCDH15Q96QU1 1955 aa12.96□□□□□ -0.33
NPHP3-201ENST00000337331 TCRAP04437 139 aa12.96□□□□□ -0.34
NPHP3-201ENST00000337331 SLC25A48Q6ZT89 311 aaKnown RBP12.96□□□□□ -0.34
NPHP3-201ENST00000337331 SONP18583 2426 aaKnown RBP12.95□□□□□ -0.34
NPHP3-201ENST00000337331 MEIG1Q5JSS6 88 aa12.95□□□□□ -0.34
NPHP3-201ENST00000337331 ZNF474Q6S9Z5 364 aaPredicted RBP12.95□□□□□ -0.34
NPHP3-201ENST00000337331 AMN1Q8IY45 258 aa12.95□□□□□ -0.34
NPHP3-201ENST00000337331 UBE2L6O14933 153 aa12.95□□□□□ -0.34
NPHP3-201ENST00000337331 IGLV3-1P01715 115 aa12.95□□□□□ -0.34
NPHP3-201ENST00000337331 CIRBPQ14011 172 aaKnown RBP12.95□□□□□ -0.34
NPHP3-201ENST00000337331 LINC01545Q5VT33 79 aa12.95□□□□□ -0.34
NPHP3-201ENST00000337331 SLC25A39Q9BZJ4 359 aaPredicted RBP12.95□□□□□ -0.34
NPHP3-201ENST00000337331 DKK2Q9UBU2 259 aa12.95□□□□□ -0.34
NPHP3-201ENST00000337331 BPTFQ12830 3046 aa12.95□□□□□ -0.34
NPHP3-201ENST00000337331 RNASE4P34096 147 aaKnown RBP12.95□□□□□ -0.34
NPHP3-201ENST00000337331 TMEM155Q4W5P6 130 aa12.95□□□□□ -0.34
NPHP3-201ENST00000337331 TCTEX1D4Q5JR98 221 aa12.95□□□□□ -0.34
NPHP3-201ENST00000337331 FOXI2Q6ZQN5 318 aa12.95□□□□□ -0.34
NPHP3-201ENST00000337331 PLXNA2O75051 1894 aa12.94□□□□□ -0.34
NPHP3-201ENST00000337331 IGHV1-3A0A0C4DH29 117 aa12.94□□□□□ -0.34
NPHP3-201ENST00000337331 IGHG3P01860 377 aa12.94□□□□□ -0.34
NPHP3-201ENST00000337331 PPDPFLQ8WWR9 84 aa12.94□□□□□ -0.34
NPHP3-201ENST00000337331 GAFA1Q96PS6 74 aa12.94□□□□□ -0.34
NPHP3-201ENST00000337331 DSCAML1Q8TD84 2053 aa12.94□□□□□ -0.34
NPHP3-201ENST00000337331 MBD3L4A6NDZ8 208 aaPredicted RBP12.94□□□□□ -0.34
NPHP3-201ENST00000337331 MBD3L3A6NE82 208 aaPredicted RBP12.94□□□□□ -0.34
NPHP3-201ENST00000337331 MBD3L5A6NJ08 208 aaPredicted RBP12.94□□□□□ -0.34
NPHP3-201ENST00000337331 MBD3L2Q8NHZ7 208 aaPredicted RBP12.94□□□□□ -0.34
NPHP3-201ENST00000337331 C1QTNF4Q9BXJ3 329 aa12.94□□□□□ -0.34
NPHP3-201ENST00000337331 ZNRD1Q9P1U0 126 aa12.94□□□□□ -0.34
NPHP3-201ENST00000337331 RNASE2P10153 161 aaKnown RBP12.94□□□□□ -0.34
NPHP3-201ENST00000337331 SUMO2P61956 95 aaKnown RBP12.94□□□□□ -0.34
NPHP3-201ENST00000337331 Q6ZPA2 131 aa12.93□□□□□ -0.34
NPHP3-201ENST00000337331 C3orf56Q8N813 242 aa12.93□□□□□ -0.34
NPHP3-201ENST00000337331 WIPF2Q8TF74 440 aaPredicted RBP12.93□□□□□ -0.34
NPHP3-201ENST00000337331 PTPN13Q12923 2485 aa12.93□□□□□ -0.34
NPHP3-201ENST00000337331 THBDP07204 575 aa12.93□□□□□ -0.34
NPHP3-201ENST00000337331 NEGR1Q7Z3B1 354 aa12.93□□□□□ -0.34
NPHP3-201ENST00000337331 NXT2Q9NPJ8 142 aaKnown RBP12.93□□□□□ -0.34
NPHP3-201ENST00000337331 PLXNB1O43157 2135 aa12.93□□□□□ -0.34
NPHP3-201ENST00000337331 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.92□□□□□ -0.34
NPHP3-201ENST00000337331 LGALS9BQ3B8N2 356 aa12.92□□□□□ -0.34
NPHP3-201ENST00000337331 LGALS9CQ6DKI2 356 aa12.92□□□□□ -0.34
NPHP3-201ENST00000337331 FAM231DQ6ZW35 169 aa12.92□□□□□ -0.34
NPHP3-201ENST00000337331 ZNF329Q86UD4 541 aa12.92□□□□□ -0.34
NPHP3-201ENST00000337331 TNFRSF18Q9Y5U5 241 aa12.92□□□□□ -0.34
NPHP3-201ENST00000337331 TNCP24821 2201 aa12.92□□□□□ -0.34
NPHP3-201ENST00000337331 IGKV2-40A0A087WW87 121 aaPredicted RBP12.92□□□□□ -0.34
NPHP3-201ENST00000337331 LY6G6EA0A0G2JKS1 128 aa12.92□□□□□ -0.34
NPHP3-201ENST00000337331 IGLL5B9A064 214 aa12.92□□□□□ -0.34
NPHP3-201ENST00000337331 IGKV2D-40P01614 121 aaPredicted RBP12.92□□□□□ -0.34
NPHP3-201ENST00000337331 C12orf74Q32Q52 190 aa12.92□□□□□ -0.34
NPHP3-201ENST00000337331 TRGV9Q99603 122 aa12.92□□□□□ -0.34
NPHP3-201ENST00000337331 U3KQA8 63 aa12.92□□□□□ -0.34
NPHP3-201ENST00000337331 TRAV40A0A0B4J280 105 aa12.92□□□□□ -0.34
NPHP3-201ENST00000337331 ZNF503-AS2A6NEH8 195 aa12.92□□□□□ -0.34
NPHP3-201ENST00000337331 H7C1H1 209 aa12.92□□□□□ -0.34
NPHP3-201ENST00000337331 MT-ATP8P03928 68 aa12.92□□□□□ -0.34
NPHP3-201ENST00000337331 Q6ZR03 302 aa12.92□□□□□ -0.34
NPHP3-201ENST00000337331 KLF12Q9Y4X4 402 aa12.92□□□□□ -0.34
NPHP3-201ENST00000337331 SIVA1O15304 175 aa12.92□□□□□ -0.34
NPHP3-201ENST00000337331 IGHV4-39P01824 125 aa12.92□□□□□ -0.34
NPHP3-201ENST00000337331 KLRD1Q13241 179 aa12.92□□□□□ -0.34
NPHP3-201ENST00000337331 PRR14LQ5THK1 2151 aa12.92□□□□□ -0.34
NPHP3-201ENST00000337331 TRAV8-4A0A0B4J246 113 aa12.91□□□□□ -0.34
NPHP3-201ENST00000337331 LINC01549A6NIU2 74 aa12.91□□□□□ -0.34
NPHP3-201ENST00000337331 IFITM1P13164 125 aa12.91□□□□□ -0.34
NPHP3-201ENST00000337331 CEND1Q8N111 149 aa12.91□□□□□ -0.34
NPHP3-201ENST00000337331 TRBV7-9A0A0J9YWB2 115 aa12.91□□□□□ -0.34
NPHP3-201ENST00000337331 ZNF815PA8K554 130 aa12.91□□□□□ -0.34
NPHP3-201ENST00000337331 C15orf32Q32M92 178 aa12.91□□□□□ -0.34
NPHP3-201ENST00000337331 SIGLEC9Q9Y336 463 aa12.91□□□□□ -0.34
NPHP3-201ENST00000337331 CEP350Q5VT06 3117 aa12.91□□□□□ -0.34
NPHP3-201ENST00000337331 CD7P09564 240 aa12.91□□□□□ -0.34
NPHP3-201ENST00000337331 LYPD2Q6UXB3 125 aa12.91□□□□□ -0.34
NPHP3-201ENST00000337331 LY6HO94772 140 aa12.9□□□□□ -0.34
NPHP3-201ENST00000337331 WDR87Q6ZQQ6 2873 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms